Factsheet for VIT_02s0025g03480.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P02560_001	Banana	cytosol	38.33	66.94
PGSC0003DMT400031815	Potato	cytosol	51.27	63.16
KRH59901	Soybean	cytosol	63.73	62.62
KRH41185	Soybean	cytosol	63.26	62.38
VIT_17s0000g03700.t01	Wine grape	cytosol	57.45	60.75
Os02t0229600-00	Rice	plasma membrane	31.3	59.75
CDY34366	Canola	cytosol	57.73	59.12
CDY45358	Canola	cytosol	58.58	58.8
CDY25511	Canola	cytosol	57.36	58.73
AT1G63640.3	Thale cress	cytosol	58.95	58.68
CDY62807	Canola	cytosol	58.67	58.67
CDY46382	Canola	cytosol	50.33	58.62
Bra027652.1-P	Field mustard	cytosol	58.2	58.36
AT5G41310.1	Thale cress	cytosol	51.83	57.54
Bra027797.1-P	Field mustard	cytosol	58.11	57.04
CDY39749	Canola	cytosol	50.14	56.08
Bra025509.1-P	Field mustard	cytosol	51.27	55.99
GSMUA_Achr4P25620_001	Banana	cytosol	56.7	55.0
OQU78322	Sorghum	cytosol	48.64	53.89
GSMUA_AchrUn_...	Banana	cytosol	52.39	53.7
Os05t0521300-04	Rice	cytosol	50.14	52.87
Os01t0744000-01	Rice	cytosol	47.7	52.42
TraesCS3D01G275200.1	Wheat	cytosol	47.24	51.85
TraesCS3A01G275300.1	Wheat	cytosol	47.24	51.85
TraesCS3B01G309000.1	Wheat	cytosol	47.14	51.75
HORVU3Hr1G070900.4	Barley	cytosol	47.24	51.69
OQU87522	Sorghum	cytosol	45.83	51.31
Zm00001d012763_P002	Maize	cytosol	41.61	50.92
Os06t0554700-01	Rice	cytosol	22.12	50.54
Zm00001d043504_P030	Maize	cytosol	46.2	50.41
Zm00001d010790_P017	Maize	cytosol, endoplasmic reticulum, nucleus	46.77	48.31
Zm00001d038797_P001	Maize	cytosol	37.96	48.16
GSMUA_Achr7P08590_001	Banana	cytosol	54.08	47.03
TraesCS1A01G341500.1	Wheat	cytosol	48.73	46.68
TraesCS1B01G354200.2	Wheat	cytosol	48.45	46.41
TraesCS1D01G343800.1	Wheat	cytosol	48.36	46.32
HORVU7Hr1G088620.8	Barley	cytosol	49.67	45.97
TraesCS7A01G356000.1	Wheat	cytosol	51.08	44.64
TraesCS7D01G366700.2	Wheat	cytosol	50.89	44.62
TraesCS7B01G271700.2	Wheat	cytosol	50.7	44.45
KXG20162	Sorghum	cytosol	49.58	43.76
Zm00001d036987_P001	Maize	cytosol, plastid	36.36	36.95
TraesCS6A01G188600.1	Wheat	cytosol	46.02	36.92
VIT_07s0005g00940.t01	Wine grape	cytosol	35.24	36.68
Zm00001d016273_P001	Maize	cytosol	45.45	36.38
VIT_14s0060g01570.t01	Wine grape	cytosol	34.68	36.38
HORVU1Hr1G075920.5	Barley	cytosol	39.83	35.99
TraesCS6B01G215900.1	Wheat	cytosol	46.86	35.92
KXG29848	Sorghum	cytosol	48.36	35.76
HORVU0Hr1G015810.3	Barley	cytosol	46.02	35.71
TraesCS6D01G177300.1	Wheat	cytosol	46.58	35.68
VIT_08s0007g08800.t01	Wine grape	cytosol	30.74	34.1
VIT_19s0015g01150.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	35.05	33.57
VIT_14s0128g00450.t01	Wine grape	cytosol	16.78	31.18
VIT_14s0128g00460.t01	Wine grape	cytosol	20.15	27.74
VIT_19s0014g05070.t01	Wine grape	cytosol	19.4	27.13
VIT_00s0532g00020.t01	Wine grape	cytosol	19.03	25.31
VIT_18s0001g07800.t01	Wine grape	cytosol	19.78	24.03
VIT_19s0027g00080.t01	Wine grape	nucleus	22.4	23.02
VIT_00s0218g00050.t01	Wine grape	nucleus	21.37	21.78
VIT_04s0044g02020.t01	Wine grape	plastid	19.21	16.17

Protein Annotations

Gene3D:1.10.418.10	EntrezGene:100256435	wikigene:100256435	MapMan:20.1.3.12	Gene3D:3.40.850.10	ProteinID:CCB58348
ProteinID:CCB58348.1	InterPro:CH-domain	InterPro:CH_dom_sf	ncoils:Coil	UniProt:F6HUC5	EMBL:FN596251
GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0005871	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	InterPro:IPR001715	InterPro:IPR001752	InterPro:IPR036872
InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	EntrezGene:LOC100256435
wikigene:LOC100256435	InterPro:P-loop_NTPase	PFAM:PF00225	PFAM:PF00307	PRINTS:PR00380	ScanProsite:PS00411
PFscan:PS50021	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF741	SMART:SM00033	SMART:SM00129
SUPFAM:SSF47576	SUPFAM:SSF52540	TIGR:TC52938	TIGR:TC70840	UniParc:UPI000210A45A	ArrayExpress:VIT_02s0025g03480
EnsemblPlantsGene:VIT_02s0025g03480	EnsemblPlants:VIT_02s0025g03480.t01	unigene:Vvi.24917	RefSeq:XP_002274169	RefSeq:XP_002274169.1	SEG:seg

Description

No Description!

Coordinates

chr2:+:2978816..2988005

Molecular Weight (calculated)

120164.0 Da

IEP (calculated)

6.828

GRAVY (calculated)

-0.583

Length

1067 amino acids

Sequence
(BLAST)

0001: MESFDGTIEG NLSQRTQLVE WLNGILPYLS LPLEASEEDL RACLIDGTVL CGILNRLSPG SIEMGGISES YLENLKRFLA AMEEMGLPRF ELSDLEQGSM
0101: DAVLQCLQTL RAHFNFNIGG ENIRNYSRKK WNLCEVECLE GFDRSQGDAS SHGEHSDEFV EERRNSLDSK FQHVLRRSVF SEPLAASIHH VGHRFQEGFQ
0201: LKQGGYADFP AAKISELVEQ KSLENTPTHL LFSILINILD GSIERKNGDV PHRVAFLLRK IIQEIEQRIS TQAENLKNQN NLYKAREEKY QSRIRVLETL
0301: ATGTTEENRV VMHQLQQIKI ENTKIEERKK LEEQDVDRLM KEKDRSDNEI LALKEELEMA RKTHEKHCLQ LETQAKETKV ELEKKLKELE NLLTDSKKKV
0401: KELEAFSESK SRRWKRKELR YQNFVDSQFG ALQELRVASD SIKREVLKTH RTYSEEFNYL GMKLKGLTEA AENYHMVLEE NRRLYNEVQD LKGNIRVYCR
0501: IRPFLPGQSE KYTTIEYIGE NGELVIVNPA KQGKDSRRLF KFNKVFSPAA TQEEVFLDTQ PLIRSVLDGY NVCIFAYGQT GSGKTYTMTG PDVSSKVDWG
0601: VNYRALNDLF HISQSRKSSI MYEVGVQMVE IYNEQVRDLL SSDGSQKRYP FLQFNTSVPD ASMHPVKSTA DVLELMNIGL MNRAVGATAL NERSSRSHSI
0701: LTVHVRGLDL ETDAVLRGSL HLVDLAGSER VLRSEATGDR LREAQHINKS LSALGDVIFA LAQKSPHVPY RNSKLTQVLQ SSLGGQAKTL MFVQLNPDVD
0801: SYSETISTLK FAERVSGVEL GAARSNKEGR DVRELMEQVA FLRDSNAKKD LEIEQLQQVN VNSTSGKRGM NSLRYGSSSP RRHSIGASRQ SHRLPQGKGS
0901: GLVQKAASDL DNCSEYSDKH SEAGSLPSID DFRHKECFAQ SKLAGGDVGQ NFTEDIELLG FGDADSEERL SDISDGGLSM GTETDGSISS IVEFTLFPEA
1001: VKPAENTEKI EKLTMPSKLP RIPQKQGPLR SSRLPSSSKS ASKVASSSRK TPAVASSSST KLTKRWQ

Best Arabidopsis Sequence Match ( AT1G63640.3 )
(BLAST)

0001: MSSHLSQDAN MNGVYVRSDV SSMLSFDGSE SRESMDDSKK GHQSLVEWLN ETLPYLKLPW EASEDELRAC LRDGTVLCSL LNQLSPGSMR MGGSFEPASV
0101: KIERFLTAMD EMALPRFEVS DIEQGDMVPV LQSLKALKAS FSDGSYDKNS LAARRRWSLP EDHSDSRGDD RNFTDGFQSK EGSEIDMSDA KISDLLKSNS
0201: LRNAPTRSLF DMLDKLLDES MTKMNGHVSH AMASLLSALV QVIEQRISNQ ADNLKNQNIL FRVREEKYRS RIKVLESLAA GTTKENEIVT NCMEHIKLEK
0301: TRIEEKERSE EKDVVRLRKE KERSDAEIRQ LKQELKLVKE THENQCLELE AKAQKTRDEL EKKLKDAELH VVDSSRKVKE LEKLCQSKSQ RWEKKECIYQ
0401: NFIDNHSGAL QELSATSLSI KHEVVRTQRK YFEDLNYYGL KLKGVADAAK NYHVVLEENR RLYNEVQELK GNIRVYCRIR PFLPGQNSRQ TTIEYIGETG
0501: ELVVANPFKQ GKDTHRLFKF NKVFDQAATQ EEVFLDTRPL IRSILDGYNV CIFAYGQTGS GKTYTMSGPS ITSKEDWGVN YRALNDLFLL TQSRQNTVMY
0601: EVGVQMVEIY NEQVRDILSD GGSSRRLGIW NTALPNGLAV PDASMHCVRS TEDVLELMNI GLMNRTVGAT ALNERSSRSH CVLSVHVRGV DVETDSILRG
0701: SLHLVDLAGS ERVDRSEATG ERLKEAQHIN KSLSALGDVI FALAHKNPHV PYRNSKLTQV LQSSLGGQAK TLMFVQVNPD GDSYAETVST LKFAERVSGV
0801: ELGAAKSSKE GRDVRQLMEQ VSNLKDVIAK KDEELQNFQK VKGNNATSLK RGLSNLRLVG PTSPRRHSIG ASPNARRGKA SGLFGRGTSD VDNCSEYSSK
0901: HSDSGSQQSS DERKHQKDYH QPSKFAGAAK GIDFDDEDVE LVGLADADSE DRLSDISDSC LSMGTETDGS ISSAVELTLF PETAKPLELI ERPEARMTSE
1001: KLEKSVKMGK TEPKDSRTNI PSKIPKQTLK PPGQTRPSRL SIATSSSSKA LTGAKRPTIS TSSSAKPLNR RR

Arabidopsis Description

P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain [Source:TAIR;Acc:AT1G63640]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.