Factsheet for VIT_08s0007g08800.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G10310.2	Thale cress	cytosol	57.69	57.28
CDY08613	Canola	cytosol	49.48	57.21
KRH66897	Soybean	cytosol	59.25	56.77
KRG95233	Soybean	cytosol	61.02	56.72
CDY00920	Canola	cytosol	55.09	56.5
Bra029829.1-P	Field mustard	cytosol	58.21	56.28
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	39.6	53.21
HORVU3Hr1G033450.10	Barley	cytosol	42.1	50.56
PGSC0003DMT400070107	Potato	cytosol	55.82	49.54
Solyc04g016080.1.1	Tomato	nucleus	61.33	47.93
Zm00001d039617_P006	Maize	cytosol	47.61	46.78
KXG31699	Sorghum	cytosol	48.34	46.59
TraesCS3B01G196600.1	Wheat	cytosol	47.4	46.44
TraesCS3D01G172000.1	Wheat	cytosol	47.3	46.38
TraesCS3A01G169800.2	Wheat	cytosol	46.88	45.97
Os01t0243100-01	Rice	cytosol	22.56	45.88
VIT_14s0060g01570.t01	Wine grape	cytosol	40.02	37.86
VIT_07s0005g00940.t01	Wine grape	cytosol	40.12	37.66
VIT_19s0015g01150.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	38.15	32.94
VIT_17s0000g03700.t01	Wine grape	cytosol	32.95	31.42
VIT_02s0025g03480.t01	Wine grape	cytosol	34.1	30.74
VIT_14s0128g00450.t01	Wine grape	cytosol	17.05	28.57
VIT_14s0128g00460.t01	Wine grape	cytosol	19.96	24.77
VIT_19s0014g05070.t01	Wine grape	cytosol	18.92	23.85
VIT_00s0532g00020.t01	Wine grape	cytosol	19.02	22.82
VIT_18s0001g07800.t01	Wine grape	cytosol	20.48	22.44
VIT_00s0218g00050.t01	Wine grape	nucleus	22.35	20.53
VIT_19s0027g00080.t01	Wine grape	nucleus	21.93	20.33
VIT_04s0044g02020.t01	Wine grape	plastid	18.5	14.04

Protein Annotations

Gene3D:1.10.418.10	MapMan:20.1.3.12	Gene3D:3.40.850.10	ProteinID:CCB55109	ProteinID:CCB55109.1	InterPro:CH-domain
InterPro:CH_dom_sf	ncoils:Coil	UniProt:F6HKV2	EMBL:FN595991	GO:GO:0000166	GO:GO:0003674
GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005871	GO:GO:0007018
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	GO:GO:0016887	InterPro:IPR001715
InterPro:IPR001752	InterPro:IPR036872	InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf
InterPro:P-loop_NTPase	PFAM:PF00225	PFAM:PF00307	PRINTS:PR00380	PFscan:PS50021	PFscan:PS50067
PANTHER:PTHR24115	PANTHER:PTHR24115:SF456	SMART:SM00033	SMART:SM00129	SUPFAM:SSF47576	SUPFAM:SSF52540
UniParc:UPI000210932E	ArrayExpress:VIT_08s0007g08800	EnsemblPlantsGene:VIT_08s0007g08800	EnsemblPlants:VIT_08s0007g08800.t01	:	:

Description

No Description!

Coordinates

chr8:+:22170222..22180717

Molecular Weight (calculated)

106630.0 Da

IEP (calculated)

9.541

GRAVY (calculated)

-0.529

Length

962 amino acids

Sequence
(BLAST)

001: MEGSATTHDM NLASRKAEEA AWRRFQAAGW LETLVGPIGV STHPSEREFV SCLRNGLILC NAINKIHPGS VPKIVENHSS SQSLTWESQP LPAYQYFENV
101: RNFLVAVEEL KLPAFEASDL ERDTLEAGSA AKVVDCILVL KSYHEWKQMG GGNGYYKHVR SPMVVHSANR VNSTASAANP SDSCRRLDMS VTPPLDGEAR
201: KLEDLIVSVF AECMVDVKEN IDDNLLDSFR SGNRVINHFN DIYKMKPIFK DLLQEGSDSN VHSKSTPLEN SSTDLKALLS RTKREFKGLE SQLQNDLKQL
301: GNVVQEMSAA AVGYQRVVKE NRNLYNMVQD LKGNIRVYCR IRPAFSVGAR STIDFIGEDG SLVIVDPLKR QRDGRRVFQF DRVFDPTATQ DAVFKDTQPL
401: IRSVMDGYNV CIFAYGQTGS GKTYTMCGPS GGSTKDMGIN YLALNDLFQM SNKRKDIITY DIYVQMVEIY NEQVRDLLAE DSSTTKYPFL MAIRSCTSEN
501: GLSLPDATVH SVKSTADVLN LMKLGELNRH VSSTAINNRS SRSHSVLTIH VHGNDLSGSI LRSCLHLVDL AGSERVDKSE VTGDRLKEAQ YINKSLSCLG
601: DVITALAQKN SHIPYRNSKL TLLLQDSLGG HAKTLMFAHL SPEDDSFGET ISTLKFAQRV STVELGTARL NKESSKVMEL KEQIENLKKA LSNKEGHSII
701: PSKVNEPRPP SEKPKGMIDR TPPRPRRLSI ENCSSLKKEK AMHPEEKKGS KTPSIRTRAR RLSLEGSNQG KKDHLLVKMS EDVSKLQPLE AFGHFSTGSS
801: MMEEEVFNYQ KAPKSPVSST YKSRVAKAAS RTQVAPFQLT KTPEPDRKEV QTMMQSDLSV SKDSQIPSFI SSGNGKGSQI RKSLRTIGKL INGSEKRNQQ
901: KLMEARTPIK GSNNAEGGRS PLTANARAMR RQSLTGIQTS GPWRSSVIGK SSDSCSNETR NA

Best Arabidopsis Sequence Match ( AT3G10310.2 )
(BLAST)

001: MTTGLHEFNL ASRRAEEAAA RRFQAVQWLK SVVGQLGIPN QPSEKEFISC LRNGMILCNA INKIHPGAVS KVVENYSYLN GEYQLPPAYQ YFENVRNFLV
101: ALETLRLPGF EASDLEKDNL ESGSVTKVVD CILGLKAYHE CKLPSNGNGL YKHVKTPTFQ LSATKIHPTL SASKTSRHLD MSSVRERNDC TDGESDKLKG
201: IAKLFADHIF SSKENIDENL VSLENGSENS RANFEKILSR FPELQSVFKN LLSEGTLKPS DLKSMPLEEL PVHEEDQSSR SLSHKTKCNH KRLLKTQEKE
301: LAVLKNLFIK TKQDFKEFQV YLQRDLMELG NQMQEMSSAA QGYYKVVEEN RKLYNMVQDL KGNIRVYCRV RPIFNSEMDG VIDYIGKDGS LFVLDPSKPY
401: KDARKTFQFN QVFGPTATQD DVFRETQPLI RSVMDGYNVC IFAYGQTGSG KTYTMSGPPG RSATEMGINY LALSDLFLIC DRRKDMMTYE IYVQMVEIYN
501: EQVRDLLAEN SSCTRLDIRT CSSDDDGLSL PDATMHSVNS TKDVLQLMEA GEVNRAVSST SMNNRSSRSH SIFMVHVRGK DTSGGTLRSC LHLVDLAGSE
601: RVDKSEVTGD RLKEAQYINK SLSCLGDVIS ALAQKNSHIP YRNSKLTLLL QDSLGGQAKT LMFAHLSPEE DSFGETISTL KFAQRVSTVE LGAARAHKET
701: REVMHLKEQI ENLKRALGTE EWNNVSNGSK EIKSPFSRPI ATTERTPPRL RRLSIENCSS TKANLEDRRG IKSPLASRRA QILSLEGPMS CKNEENGKGD
801: PTMEVHQLKN PRSPLSSYQN RAVKVDGRTS IPQLQLLQTP VKGASRNDIQ MISVDSKTNG KGSHIRKSLR TIGKLINGSE KRKENIPADP RSPLGVANNF
901: SHIKSPDTSN AKTMRRQSLT GVMPPGQERS RRSSIGGKPI ENGVNVTDSR NAKTPPPMRS ASKIGKKWA

Arabidopsis Description

P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMT1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.