Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G172000.1 | Wheat | cytosol | 96.84 | 96.94 |
| TraesCS3A01G169800.2 | Wheat | cytosol | 96.64 | 96.74 |
| HORVU3Hr1G033450.10 | Barley | cytosol | 77.8 | 95.38 |
| Os01t0243100-01 | Rice | cytosol | 37.58 | 78.01 |
| KXG31699 | Sorghum | cytosol | 73.32 | 72.14 |
| Zm00001d039617_P006 | Maize | cytosol | 71.08 | 71.3 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 41.14 | 56.42 |
| CDY08613 | Canola | cytosol | 40.63 | 47.96 |
| VIT_08s0007g08800.t01 | Wine grape | cytosol | 46.44 | 47.4 |
| AT3G10310.2 | Thale cress | cytosol | 46.13 | 46.75 |
| CDY00920 | Canola | cytosol | 44.09 | 46.16 |
| Bra029829.1-P | Field mustard | cytosol | 46.44 | 45.83 |
| KRH66897 | Soybean | cytosol | 46.13 | 45.12 |
| KRG95233 | Soybean | cytosol | 46.95 | 44.54 |
| PGSC0003DMT400070107 | Potato | cytosol | 42.16 | 38.19 |
| Solyc04g016080.1.1 | Tomato | nucleus | 46.33 | 36.96 |
| TraesCS4B01G186700.1 | Wheat | cytosol | 34.93 | 34.37 |
| TraesCS5B01G099000.1 | Wheat | cytosol | 34.01 | 33.33 |
| TraesCS2B01G348700.1 | Wheat | cytosol | 34.62 | 32.79 |
| TraesCS4B01G126400.1 | Wheat | cytosol | 34.11 | 32.49 |
| TraesCS3B01G309000.1 | Wheat | cytosol | 30.14 | 30.45 |
| TraesCS1B01G354200.2 | Wheat | cytosol | 30.35 | 26.75 |
| TraesCS7B01G271700.2 | Wheat | cytosol | 31.06 | 25.06 |
| TraesCS1B01G259800.1 | Wheat | cytosol | 20.37 | 23.15 |
| TraesCS2B01G505400.2 | Wheat | cytosol, plastid | 17.01 | 21.27 |
| TraesCS2B01G342100.1 | Wheat | cytosol | 16.6 | 21.11 |
| TraesCS6B01G215900.1 | Wheat | cytosol | 29.63 | 20.91 |
| TraesCS5B01G032700.1 | Wheat | nucleus | 19.86 | 20.0 |
| TraesCS4B01G398000.1 | Wheat | cytosol | 21.89 | 18.31 |
| TraesCS2B01G514800.1 | Wheat | cytosol | 16.4 | 13.18 |
Protein Annotations
| Gene3D:1.10.418.10 | MapMan:20.1.3.12 | Gene3D:3.40.850.10 | InterPro:CH-domain | InterPro:CH_dom_sf | ncoils:Coil |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003774 | GO:GO:0003777 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0007018 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016787 | InterPro:IPR001715 | InterPro:IPR001752 | InterPro:IPR036872 | InterPro:IPR036961 | InterPro:Kinesin-like_fam |
| InterPro:Kinesin_motor_dom | InterPro:Kinesin_motor_dom_sf | InterPro:P-loop_NTPase | PFAM:PF00225 | PFAM:PF00307 | PRINTS:PR00380 |
| PFscan:PS50021 | PFscan:PS50067 | PANTHER:PTHR24115 | PANTHER:PTHR24115:SF456 | SMART:SM00033 | SMART:SM00129 |
| SUPFAM:SSF47576 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS3B01G196600 | EnsemblPlants:TraesCS3B01G196600.1 | TIGR:cd00014 | SEG:seg |
Description
No Description!
Coordinates
chr3B:+:223511916..223519737
Molecular Weight (calculated)
108652.0 Da
IEP (calculated)
8.980
GRAVY (calculated)
-0.593
Length
982 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEARRVSFR GGRFASRKTE EAVWRRHQAA AWLESMVGPF GLSHCPSEQE FVAALRNGIV LCKAINKIQP GVVPKVVANA PCDSQPSTAF QYFENIRNFL
101: VAVQELKLPS FEASDLEKDN LDAGSVGKIV DCVNSLKSYQ ERKKCSGTYG PVKYMKSPLA PCSAIHVQSE NVTSGSSTPQ KCLDLKEIDA EGQSFQNVGP
201: NMEEAIGKLQ RIILDCMISC KENLNQDVLK KDPVTLVGTI LSNQLEKEQF KPLLQLISPE GAAMENEPNQ HIECSNSQNE NRLRLLEAQE SELLELKTMF
301: QEVKVDFRSL QTQFQDDITE LGHNIQGISK AALGYNQAVK ENRNLYNMLQ EVRGNIRVFC RIRPLMNSKS ISSIEHVGND GSIMVCDPYK PQTTRKIFQF
401: NQIFGPTTTQ DEIYRETQSL IRSVMDGYNV CILAYGQTGS GKTHTMCGPS GGLSSNDLGI NYMALNDLFT ISTSREDVKY DIRVQMVEIY NEQVRDLLSE
501: DTSSTKLDIR SSSNGLFNLP DAKMCPVQSP SDVMNLMLLG EKHRASGPTA MNNRSSRSHS ILTVHVSGKD ISGNVSCSCL HLVDLAGSER VDRSEATGDR
601: LKEAQHINKS LSCLGDVITA LAQKNSHIPY RNSKLTQLLQ SSLGGNAKTL MLAHISPEGE SYVETLSTLK FAQRASTVEL GTAHANKESN DIRELKEQVE
701: TLKKALATKE FERSSLKLKE NTVTSGRTKQ LPERTPPRPR RLSLETTSSE KGSIPGKPPK SPVSAMRFNR DHRTARDKEC SIDGFNRTKL HRSVIQMSPT
801: LSEEPVGHEN EKIITTDDTV TFYQLPPDGY NQYKQSGLDT LQRTPCRSRY MGVEVRQTEE PSDAKLDKTT TSSVAKKGSH LRRSIQSSIG KLIHGSERRN
901: TPHSAQATPA KITTNANNDG TSPITTNARL KRRQSLTGLP PPSSTMSRRS SLGGKSDSTG SSDRKAKTPP PMNSAAKAKR WL
101: VAVQELKLPS FEASDLEKDN LDAGSVGKIV DCVNSLKSYQ ERKKCSGTYG PVKYMKSPLA PCSAIHVQSE NVTSGSSTPQ KCLDLKEIDA EGQSFQNVGP
201: NMEEAIGKLQ RIILDCMISC KENLNQDVLK KDPVTLVGTI LSNQLEKEQF KPLLQLISPE GAAMENEPNQ HIECSNSQNE NRLRLLEAQE SELLELKTMF
301: QEVKVDFRSL QTQFQDDITE LGHNIQGISK AALGYNQAVK ENRNLYNMLQ EVRGNIRVFC RIRPLMNSKS ISSIEHVGND GSIMVCDPYK PQTTRKIFQF
401: NQIFGPTTTQ DEIYRETQSL IRSVMDGYNV CILAYGQTGS GKTHTMCGPS GGLSSNDLGI NYMALNDLFT ISTSREDVKY DIRVQMVEIY NEQVRDLLSE
501: DTSSTKLDIR SSSNGLFNLP DAKMCPVQSP SDVMNLMLLG EKHRASGPTA MNNRSSRSHS ILTVHVSGKD ISGNVSCSCL HLVDLAGSER VDRSEATGDR
601: LKEAQHINKS LSCLGDVITA LAQKNSHIPY RNSKLTQLLQ SSLGGNAKTL MLAHISPEGE SYVETLSTLK FAQRASTVEL GTAHANKESN DIRELKEQVE
701: TLKKALATKE FERSSLKLKE NTVTSGRTKQ LPERTPPRPR RLSLETTSSE KGSIPGKPPK SPVSAMRFNR DHRTARDKEC SIDGFNRTKL HRSVIQMSPT
801: LSEEPVGHEN EKIITTDDTV TFYQLPPDGY NQYKQSGLDT LQRTPCRSRY MGVEVRQTEE PSDAKLDKTT TSSVAKKGSH LRRSIQSSIG KLIHGSERRN
901: TPHSAQATPA KITTNANNDG TSPITTNARL KRRQSLTGLP PPSSTMSRRS SLGGKSDSTG SSDRKAKTPP PMNSAAKAKR WL
001: MTTGLHEFNL ASRRAEEAAA RRFQAVQWLK SVVGQLGIPN QPSEKEFISC LRNGMILCNA INKIHPGAVS KVVENYSYLN GEYQLPPAYQ YFENVRNFLV
101: ALETLRLPGF EASDLEKDNL ESGSVTKVVD CILGLKAYHE CKLPSNGNGL YKHVKTPTFQ LSATKIHPTL SASKTSRHLD MSSVRERNDC TDGESDKLKG
201: IAKLFADHIF SSKENIDENL VSLENGSENS RANFEKILSR FPELQSVFKN LLSEGTLKPS DLKSMPLEEL PVHEEDQSSR SLSHKTKCNH KRLLKTQEKE
301: LAVLKNLFIK TKQDFKEFQV YLQRDLMELG NQMQEMSSAA QGYYKVVEEN RKLYNMVQDL KGNIRVYCRV RPIFNSEMDG VIDYIGKDGS LFVLDPSKPY
401: KDARKTFQFN QVFGPTATQD DVFRETQPLI RSVMDGYNVC IFAYGQTGSG KTYTMSGPPG RSATEMGINY LALSDLFLIC DRRKDMMTYE IYVQMVEIYN
501: EQVRDLLAEN SSCTRLDIRT CSSDDDGLSL PDATMHSVNS TKDVLQLMEA GEVNRAVSST SMNNRSSRSH SIFMVHVRGK DTSGGTLRSC LHLVDLAGSE
601: RVDKSEVTGD RLKEAQYINK SLSCLGDVIS ALAQKNSHIP YRNSKLTLLL QDSLGGQAKT LMFAHLSPEE DSFGETISTL KFAQRVSTVE LGAARAHKET
701: REVMHLKEQI ENLKRALGTE EWNNVSNGSK EIKSPFSRPI ATTERTPPRL RRLSIENCSS TKANLEDRRG IKSPLASRRA QILSLEGPMS CKNEENGKGD
801: PTMEVHQLKN PRSPLSSYQN RAVKVDGRTS IPQLQLLQTP VKGASRNDIQ MISVDSKTNG KGSHIRKSLR TIGKLINGSE KRKENIPADP RSPLGVANNF
901: SHIKSPDTSN AKTMRRQSLT GVMPPGQERS RRSSIGGKPI ENGVNVTDSR NAKTPPPMRS ASKIGKKWA
101: ALETLRLPGF EASDLEKDNL ESGSVTKVVD CILGLKAYHE CKLPSNGNGL YKHVKTPTFQ LSATKIHPTL SASKTSRHLD MSSVRERNDC TDGESDKLKG
201: IAKLFADHIF SSKENIDENL VSLENGSENS RANFEKILSR FPELQSVFKN LLSEGTLKPS DLKSMPLEEL PVHEEDQSSR SLSHKTKCNH KRLLKTQEKE
301: LAVLKNLFIK TKQDFKEFQV YLQRDLMELG NQMQEMSSAA QGYYKVVEEN RKLYNMVQDL KGNIRVYCRV RPIFNSEMDG VIDYIGKDGS LFVLDPSKPY
401: KDARKTFQFN QVFGPTATQD DVFRETQPLI RSVMDGYNVC IFAYGQTGSG KTYTMSGPPG RSATEMGINY LALSDLFLIC DRRKDMMTYE IYVQMVEIYN
501: EQVRDLLAEN SSCTRLDIRT CSSDDDGLSL PDATMHSVNS TKDVLQLMEA GEVNRAVSST SMNNRSSRSH SIFMVHVRGK DTSGGTLRSC LHLVDLAGSE
601: RVDKSEVTGD RLKEAQYINK SLSCLGDVIS ALAQKNSHIP YRNSKLTLLL QDSLGGQAKT LMFAHLSPEE DSFGETISTL KFAQRVSTVE LGAARAHKET
701: REVMHLKEQI ENLKRALGTE EWNNVSNGSK EIKSPFSRPI ATTERTPPRL RRLSIENCSS TKANLEDRRG IKSPLASRRA QILSLEGPMS CKNEENGKGD
801: PTMEVHQLKN PRSPLSSYQN RAVKVDGRTS IPQLQLLQTP VKGASRNDIQ MISVDSKTNG KGSHIRKSLR TIGKLINGSE KRKENIPADP RSPLGVANNF
901: SHIKSPDTSN AKTMRRQSLT GVMPPGQERS RRSSIGGKPI ENGVNVTDSR NAKTPPPMRS ASKIGKKWA
Arabidopsis Description
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMT1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.