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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY08613 Canola cytosol 84.65 95.43
AT3G10310.2 Thale cress cytosol 85.5 82.77
VIT_08s0007g08800.t01 Wine grape cytosol 56.5 55.09
KRH66897 Soybean cytosol 55.54 51.89
KRG95233 Soybean cytosol 55.86 50.63
HORVU3Hr1G033450.10 Barley cytosol 40.51 47.44
Os01t0243100-01 Rice cytosol 23.45 46.51
GSMUA_AchrUn_... Banana endoplasmic reticulum 34.86 45.67
TraesCS3B01G196600.1 Wheat cytosol 46.16 44.09
TraesCS3D01G172000.1 Wheat cytosol 45.84 43.83
TraesCS3A01G169800.2 Wheat cytosol 45.84 43.83
Zm00001d039617_P006 Maize cytosol 44.46 42.59
KXG31699 Sorghum cytosol 44.56 41.88
PGSC0003DMT400070107 Potato cytosol 48.08 41.61
Solyc04g016080.1.1 Tomato nucleus 53.09 40.45
CDY53341 Canola cytosol 33.69 34.35
CDY19745 Canola cytosol 33.8 33.8
CDY57719 Canola cytosol 34.86 33.23
CDX80111 Canola cytosol 34.97 33.13
CDY31108 Canola cytosol 34.33 33.03
CDX88251 Canola cytosol 33.37 32.98
CDY32155 Canola cytosol 34.33 32.39
CDX80606 Canola cytosol 34.22 32.33
CDY67329 Canola cytosol 27.83 31.83
CDY46382 Canola cytosol 29.42 30.13
CDY29715 Canola cytosol 33.05 29.03
CDY39749 Canola cytosol 29.32 28.83
CDY20350 Canola cytosol 32.94 28.43
CDY34366 Canola cytosol 30.38 27.35
CDY25511 Canola cytosol 30.28 27.26
CDY19209 Canola plastid 26.44 26.58
CDY62807 Canola cytosol 29.85 26.24
CDY45358 Canola cytosol 29.53 26.06
CDX68208 Canola cytosol, plastid 26.76 24.8
CDY11085 Canola cytosol, plastid 26.65 24.7
CDX89269 Canola cytosol 17.8 23.62
CDY29282 Canola cytosol 17.8 23.62
CDY05571 Canola cytosol 19.4 23.54
CDY06633 Canola cytosol 18.76 23.34
CDY28759 Canola cytosol, plastid 18.76 23.34
CDY25031 Canola cytosol 19.4 23.33
CDY68543 Canola cytosol, plastid 18.66 23.24
CDY67586 Canola cytosol, plastid 18.66 23.24
CDX99979 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 19.51 23.11
CDY19726 Canola cytosol 19.62 22.97
CDY26163 Canola plastid 26.55 22.89
CDX73023 Canola cytosol, plastid 21.43 22.46
CDX96493 Canola cytosol, plastid 21.96 21.87
CDY46372 Canola cytosol, plastid 17.59 20.78
CDY39158 Canola cytosol, plastid 17.48 20.68
CDX96387 Canola cytosol 22.81 19.49
CDX72881 Canola cytosol 22.39 19.44
CDX76903 Canola cytosol 21.64 19.3
CDY13741 Canola cytosol 21.54 19.26
CDX82160 Canola cytosol 22.92 18.96
CDY03649 Canola cytosol 22.6 18.39
CDY55105 Canola cytosol 18.66 13.91
CDX81427 Canola cytosol 18.66 13.83
CDY18577 Canola cytosol 18.55 13.75
CDY57771 Canola cytosol, plastid 18.98 12.94
Protein Annotations
Gene3D:1.10.418.10MapMan:20.1.3.12Gene3D:3.40.850.10GO:A0A078EFR4EnsemblPlants:CDY00920ProteinID:CDY00920
ProteinID:CDY00920.1InterPro:CH-domainInterPro:CH_dom_sfncoils:CoilGO:GO:0000166GO:GO:0003674
GO:GO:0003774GO:GO:0003777GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0007018GO:GO:0008017GO:GO:0008150GO:GO:0009987GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00110923001
InterPro:IPR001715InterPro:IPR001752InterPro:IPR036872InterPro:IPR036961InterPro:Kinesin-like_famInterPro:Kinesin_motor_dom
InterPro:Kinesin_motor_dom_sfInterPro:P-loop_NTPasePFAM:PF00225PFAM:PF00307PFAM:PF16796PRINTS:PR00380
PFscan:PS50021PFscan:PS50067PANTHER:PTHR24115PANTHER:PTHR24115:SF456SMART:SM00033SMART:SM00129
SUPFAM:SSF47576SUPFAM:SSF52540UniParc:UPI0004EF05C6InterPro:Vik1/Cik1_MT-bdSEG:seg:
Description
BnaC05g42800D
Coordinates
chrLK031923:+:116527..121259
Molecular Weight (calculated)
104308.0 Da
IEP (calculated)
9.824
GRAVY (calculated)
-0.553
Length
938 amino acids
Sequence
(BLAST)
001: MTSAIATGLH EFHLVSRRAE EAASRRFQAV QWLQSVVGQL GISDQPSEKE FVSCLRNGMV LCNAINKIHP GAVSKVVESY SHMQSFTREY QLPQAYQYFE
101: NVRNFLVALE QLRLPGFQAS DLEKDNLEAG SVSKVVDCVL GLKAYHECKM TSSGNGLYKH VKTPTFQLSA TKVLPVSASK TSRHLDRNDC ADGESDQLKV
201: IAKLVADHIF NSKENIDENL ISLENDNESS TVNFQKIISR FPELQSIFKN LLNEGTPKPS DVKPMPLEEL PVGEEDKSRT SLLHTTKYNH KRLLKTQENE
301: LAVLKTLFIQ TKQDFKEFQA HLQRDLMELG NQMQEMSSAA QGYYKVVEEN RKLYNMVQDL KGNIRVFCRV RPIFNSEMRG VIDYIGKDGS LFVLDPSKPQ
401: KDARKTFQFN QVFAPTATQD DVFRETQPLI RSVMDGYNVC IFAYGQTGSG KTYTMSGPPG RSATEMGINY LALNDLFLIC DKRKDMMTTC SSEDDGLSLP
501: DATMHSVNST MDVLRLMEAG EVNRAVSSTS MNNRSSRSHS IFMVHVRGKD TSGGTIRSCL HLVDLAGSER VDKSEVTGDR LKEAQYINKS LSCLGDVIYA
601: LAQKNSHIPY RNSKLTLLLQ DALGGQAKTL MFAHLSPEED SFGETISTLK FAQRVSTVEL GVARAHKETR EVMHLKEQIE SLKKALGSGE WNSVSYSGAK
701: EIKSPLSRPI PTTERAPPRL RRLSIESCSN AKANLEDRKG VKSPLASRRA QRLSMEGPRS CKKEENSKGD SNTEVQQVKS PLSPPVSSYR TRAVKVDGRT
801: SIPQLQLLQT PVKEDARNEI QFISVDSRTN GKSSHIRKSL RTIGKLINGS EKRKENIPAN PRSPLGVSNN FSGVKSPQAS NAKTLRRQSL TGVMPSGPER
901: SRRSSIGGNP IENGESGVRT AKTPPPIRSS SKIVKKRA
Best Arabidopsis Sequence Match ( AT3G10310.2 )
(BLAST)
001: MTTGLHEFNL ASRRAEEAAA RRFQAVQWLK SVVGQLGIPN QPSEKEFISC LRNGMILCNA INKIHPGAVS KVVENYSYLN GEYQLPPAYQ YFENVRNFLV
101: ALETLRLPGF EASDLEKDNL ESGSVTKVVD CILGLKAYHE CKLPSNGNGL YKHVKTPTFQ LSATKIHPTL SASKTSRHLD MSSVRERNDC TDGESDKLKG
201: IAKLFADHIF SSKENIDENL VSLENGSENS RANFEKILSR FPELQSVFKN LLSEGTLKPS DLKSMPLEEL PVHEEDQSSR SLSHKTKCNH KRLLKTQEKE
301: LAVLKNLFIK TKQDFKEFQV YLQRDLMELG NQMQEMSSAA QGYYKVVEEN RKLYNMVQDL KGNIRVYCRV RPIFNSEMDG VIDYIGKDGS LFVLDPSKPY
401: KDARKTFQFN QVFGPTATQD DVFRETQPLI RSVMDGYNVC IFAYGQTGSG KTYTMSGPPG RSATEMGINY LALSDLFLIC DRRKDMMTYE IYVQMVEIYN
501: EQVRDLLAEN SSCTRLDIRT CSSDDDGLSL PDATMHSVNS TKDVLQLMEA GEVNRAVSST SMNNRSSRSH SIFMVHVRGK DTSGGTLRSC LHLVDLAGSE
601: RVDKSEVTGD RLKEAQYINK SLSCLGDVIS ALAQKNSHIP YRNSKLTLLL QDSLGGQAKT LMFAHLSPEE DSFGETISTL KFAQRVSTVE LGAARAHKET
701: REVMHLKEQI ENLKRALGTE EWNNVSNGSK EIKSPFSRPI ATTERTPPRL RRLSIENCSS TKANLEDRRG IKSPLASRRA QILSLEGPMS CKNEENGKGD
801: PTMEVHQLKN PRSPLSSYQN RAVKVDGRTS IPQLQLLQTP VKGASRNDIQ MISVDSKTNG KGSHIRKSLR TIGKLINGSE KRKENIPADP RSPLGVANNF
901: SHIKSPDTSN AKTMRRQSLT GVMPPGQERS RRSSIGGKPI ENGVNVTDSR NAKTPPPMRS ASKIGKKWA
Arabidopsis Description
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMT1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.