CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031801.1-P	Field mustard	cytosol	99.44	97.66
AT5G65930.3	Thale cress	cytosol	89.9	89.34
CDX81427	Canola	cytosol	89.43	88.93
CDY18577	Canola	cytosol	89.27	88.77
CDY57771	Canola	cytosol, plastid	95.23	87.06
VIT_04s0044g02020.t01	Wine grape	plastid	72.1	71.53
Os04t0666900-01	Rice	cytosol	67.89	71.05
TraesCS2B01G514800.1	Wheat	cytosol	68.28	70.29
Solyc02g068340.2.1	Tomato	nucleus	70.03	69.64
PGSC0003DMT400024387	Potato	cytosol, plastid	70.03	69.64
KRH28979	Soybean	cytosol, plastid	69.71	69.11
KRH76479	Soybean	plastid	69.63	69.03
KRH39362	Soybean	cytosol	69.24	68.64
TraesCS2A01G487500.1	Wheat	cytosol	68.6	68.06
EES13049	Sorghum	cytosol	68.76	68.06
KRH07792	Soybean	cytosol	68.68	67.98
Zm00001d001928_P006	Maize	cytosol, plastid	68.52	67.77
HORVU2Hr1G108840.1	Barley	plastid	68.6	67.47
TraesCS2D01G487700.1	Wheat	cytosol	68.52	67.4
Zm00001d026548_P049	Maize	cytosol	68.12	66.74
GSMUA_Achr1P06170_001	Banana	cytosol, plastid	66.93	66.51
GSMUA_Achr3P11630_001	Banana	cytosol	67.89	66.25
CDY29282	Canola	cytosol	14.23	25.32
CDX89269	Canola	cytosol	14.07	25.04
CDY68543	Canola	cytosol, plastid	14.86	24.83
CDY67586	Canola	cytosol, plastid	14.71	24.57
CDY28759	Canola	cytosol, plastid	14.63	24.4
CDY06633	Canola	cytosol	14.63	24.4
CDY46372	Canola	cytosol, plastid	15.34	24.31
CDY39158	Canola	cytosol, plastid	15.26	24.21
CDY05571	Canola	cytosol	14.23	23.16
CDY25031	Canola	cytosol	14.31	23.08
CDY19726	Canola	cytosol	14.55	22.85
CDX99979	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	14.31	22.73
CDX96387	Canola	cytosol	19.55	22.4
CDX72881	Canola	cytosol	19.16	22.31
CDX82160	Canola	cytosol	19.71	21.87
CDY03649	Canola	cytosol	19.48	21.25
CDY19745	Canola	cytosol	15.34	20.58
CDY08613	Canola	cytosol	13.59	20.55
CDY53341	Canola	cytosol	14.86	20.33
CDY67329	Canola	cytosol	13.2	20.24
CDY31108	Canola	cytosol	15.5	20.0
CDY32155	Canola	cytosol	15.74	19.92
CDY46382	Canola	cytosol	14.47	19.87
CDX88251	Canola	cytosol	14.79	19.6
CDY13741	Canola	cytosol	16.3	19.54
CDX76903	Canola	cytosol	16.3	19.49
CDX80606	Canola	cytosol	15.34	19.44
CDY57719	Canola	cytosol	15.18	19.41
CDX80111	Canola	cytosol	15.26	19.39
CDY19209	Canola	plastid	14.23	19.19
CDY39749	Canola	cytosol	14.31	18.87
CDY00920	Canola	cytosol	13.91	18.66
CDY34366	Canola	cytosol	14.94	18.04
CDY25511	Canola	cytosol	14.94	18.04
CDY62807	Canola	cytosol	14.71	17.34
CDY29715	Canola	cytosol	14.47	17.04
CDY45358	Canola	cytosol	14.39	17.03
CDX68208	Canola	cytosol, plastid	13.51	16.8
CDY20350	Canola	cytosol	14.47	16.74
CDY11085	Canola	cytosol, plastid	13.43	16.7
CDY26163	Canola	plastid	14.23	16.45
CDX73023	Canola	cytosol, plastid	10.49	14.75
CDX96493	Canola	cytosol, plastid	10.73	14.33

Protein Annotations

Gene3D:1.20.80.10	Gene3D:1.25.40.530	Gene3D:2.30.29.30	MapMan:20.1.3.12	Gene3D:3.10.20.90	Gene3D:3.40.850.10
GO:A0A078IXT5	UniProt:A0A078IXT5	InterPro:Band_41_domain	EnsemblPlants:CDY55105	ProteinID:CDY55105	ProteinID:CDY55105.1
ncoils:Coil	InterPro:FERM/acyl-CoA-bd_prot_sf	InterPro:FERM_2	InterPro:FERM_N	InterPro:FERM_central	InterPro:FERM_domain
GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0016787	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00016407001	InterPro:IPR000299	InterPro:IPR000857	InterPro:IPR001752
InterPro:IPR011993	InterPro:IPR014352	InterPro:IPR036961	InterPro:IPR038185	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS
InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:MyTH4_dom	InterPro:MyTH4_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225
PFAM:PF00373	PFAM:PF00784	PFAM:PF09379	InterPro:PH-like_dom_sf	PRINTS:PR00380	ScanProsite:PS00411
PFscan:PS50057	PFscan:PS50067	PFscan:PS51016	PANTHER:PTHR24115	PANTHER:PTHR24115:SF162	InterPro:Prismane-like_sf
SMART:SM00129	SMART:SM00139	SMART:SM00295	SUPFAM:SSF47031	SUPFAM:SSF50729	SUPFAM:SSF52540
SUPFAM:SSF56821	UniParc:UPI0004EE894D	SEG:seg	:	:	:

Description

BnaA02g34890DBnaA02g34890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IXT5]

Coordinates

chrLK033375:+:53724..59943

Molecular Weight (calculated)

143623.0 Da

IEP (calculated)

7.995

GRAVY (calculated)

-0.492

Length

1258 amino acids

Sequence
(BLAST)

0001: MEGQRGSNSS LSSGNGNEVA ADASSCLYVP DPSGTDFDAE SSALSSPASI PADLAAAIPL IDRFQVEAFL RLMQKQIQSG GKRGFFYSKK SSGGSQSHLQ
0101: KERFTFEDML CFQKDPIPTS LLKINTDLLT RATKLFNLIL KYMGVDSSTP PSLDERIDLV GKLFKKTLKR VQLRDELFAQ ISKQTRHNPH SHYLIRAWEL
0201: MYLCASSMPP SKDIAAYLSE YIHNVAHDAT TVPEAQLLSL NTSKALKRSI KAGPRHTTPA REEIEALLTR RKLTTIVFFL DETFEEISYD MATTVSDALE
0301: ELAGTIKLSA FSSFGFFECR KVVSTSKSSD PGNEDYIGLD DNKYIGDLLA EFKAIKDRNK GEILHCKLVF KKKLFRESDE AVTDLMFVQL SYVQLQHDYL
0401: LGNYPVGRDD AAQLCALQIL VGIGYDYNII LFLVGSRIRD WTSLLERFLP RQIAITRAKR EWELDILARY SSMENVTKDD ARQQFLRILK ALPYGNSVFF
0501: SVRKIDDPIG LLPGRIILGI NKRGVHFFRP VPKEYLHSAE LRDIMQFGSS NTAVFFKMRV AGVLHIFQFE TKQGEEICVA LQTHINDVML RRYSKARYAA
0601: NSLVNGGDIS CSSKPQNLEV YEKRVQDLSK AFEESQKKND KLMDEVREKH LQEITLREEL EAIRHNLEPE RKKMLEVTLD RNKLKTLCDE KETAIQSLMS
0701: ELRGTEARLA KSGNTKSSKS ELTEMNNQKL YKIQTELEVR NKELHIAVEN SKRLLSQNKI LEQSVFNIEN KKTEEVENQK RYEQERKVLK LQVSELKNKL
0801: DVLTQDLDRA ECTIETKTSD MKLLQNNLKE LEELREMKED IDRKNEQTAA ILKMQGAQLA ELEILYKEEQ VLRKRYYNTI EDMKGKIRVY CRIRPLNEKE
0901: RSEREKQMLT SVDEFTVEHS WKDDKRKQHI YDRVFDMLAS QDDVFEDTKY LIQSAIDGYN VCIFAYGQTG SGKTFTIYGH ENNPGLTPRA TKELFKILKR
1001: DSNRFSFSLK AYMVELYQDT LVDLLLPKSA RRLKLDIKKD SKGMVFVENV TTIPISTLEE LRMIIERGSE RRHVSGTNMN EESSRSHLIL SVVIESIDLQ
1101: TQSASRGKLS FVDLAGSERV KKSGSAGCQL KEAQSINKSL SALGDVIGAL SSGSQHIPYR NHKLTMLMSD SLGGNAKTLM FVNVSPAESN LDETYNSLLY
1201: ASRVRMIVND PNKHISSKEM VRLKKLVAYW KEQAGKKSEE EDLLEIEEYR TLRDEGDS

Best Arabidopsis Sequence Match ( AT5G65930.2 )
(BLAST)

0001: MEGQRGSNSS LSSGNGTEVA TDVSSCFYVP NPSGTDFDAE SSSLPPLSPA PQVALSIPAE LAAAIPLIDR FQVEAFLRLM QKQIQSAGKR GFFYSKKSSG
0101: SNVRERFTFE DMLCFQKDPI PTSLLKINSD LVSRATKLFH LILKYMGVDS SDRSTPPSLD ERIDLVGKLF KKTLKRVELR DELFAQISKQ TRHNPDRQYL
0201: IKAWELMYLC ASSMPPSKDI GGYLSEYIHN VAHDATIEPD AQVLAVNTLK ALKRSIKAGP RHTTPGREEI EALLTGRKLT TIVFFLDETF EEISYDMATT
0301: VSDAVEELAG TIKLSAFSSF SLFECRKVVS SSKSSDPGNE EYIGLDDNKY IGDLLAEFKA IKDRNKGEIL HCKLVFKKKL FRESDEAVTD LMFVQLSYVQ
0401: LQHDYLLGNY PVGRDDAAQL CALQILVGIG FVNSPESCID WTSLLERFLP RQIAITRAKR EWELDILARY RSMENVTKDD ARQQFLRILK ALPYGNSVFF
0501: SVRKIDDPIG LLPGRIILGI NKRGVHFFRP VPKEYLHSAE LRDIMQFGSS NTAVFFKMRV AGVLHIFQFE TKQGEEICVA LQTHINDVML RRYSKARSAA
0601: NSLVNGDISC SSKPQNFEVY EKRLQDLSKA YEESQKKIEK LMDEQQEKNQ QEVTLREELE AIHNGLELER RKLLEVTLDR DKLRSLCDEK GTTIQSLMSE
0701: LRGMEARLAK SGNTKSSKET KSELAEMNNQ ILYKIQKELE VRNKELHVAV DNSKRLLSEN KILEQNLNIE KKKKEEVEIH QKRYEQEKKV LKLRVSELEN
0801: KLEVLAQDLD SAESTIESKN SDMLLLQNNL KELEELREMK EDIDRKNEQT AAILKMQGAQ LAELEILYKE EQVLRKRYYN TIEDMKGKIR VYCRIRPLNE
0901: KESSEREKQM LTTVDEFTVE HPWKDDKRKQ HIYDRVFDMR ASQDDIFEDT KYLVQSAVDG YNVCIFAYGQ TGSGKTFTIY GHESNPGLTP RATKELFNIL
1001: KRDSKRFSFS LKAYMVELYQ DTLVDLLLPK SARRLKLEIK KDSKGMVFVE NVTTIPISTL EELRMILERG SERRHVSGTN MNEESSRSHL ILSVVIESID
1101: LQTQSAARGK LSFVDLAGSE RVKKSGSAGC QLKEAQSINK SLSALGDVIG ALSSGNQHIP YRNHKLTMLM SDSLGGNAKT LMFVNVSPAE SNLDETYNSL
1201: LYASRVRTIV NDPSKHISSK EMVRLKKLVA YWKEQAGKKG EEEDLVDIEE DRTRKDEADS

Arabidopsis Description

ZWIKinesin-like calmodulin-binding protein ZWICHEL [Source:UniProtKB/TrEMBL;Acc:F4JXM5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.