Factsheet for PGSC0003DMT400024387

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g068340.2.1	Tomato	nucleus	99.13	99.13
Bra005043.1-P	Field mustard	cytosol	9.88	79.11
VIT_04s0044g02020.t01	Wine grape	plastid	79.13	78.94
KRH39362	Soybean	cytosol	74.94	74.7
KRH76479	Soybean	plastid	74.86	74.63
KRH28979	Soybean	cytosol, plastid	74.86	74.63
KRH07792	Soybean	cytosol	74.47	74.11
Os04t0666900-01	Rice	cytosol	68.38	71.96
AT5G65930.3	Thale cress	cytosol	72.02	71.96
GSMUA_Achr3P11630_001	Banana	cytosol	72.73	71.37
GSMUA_Achr1P06170_001	Banana	cytosol, plastid	71.3	71.25
TraesCS2B01G514800.1	Wheat	cytosol	68.62	71.03
EES13049	Sorghum	cytosol	71.3	70.97
CDY18577	Canola	cytosol	70.75	70.75
Bra037195.1-P	Field mustard	cytosol	70.59	70.65
CDX81427	Canola	cytosol	70.43	70.43
Zm00001d001928_P006	Maize	cytosol, plastid	70.75	70.36
CDY55105	Canola	cytosol	69.64	70.03
TraesCS2A01G487500.1	Wheat	cytosol	70.2	70.03
TraesCS2D01G487700.1	Wheat	cytosol	70.28	69.51
Zm00001d026548_P049	Maize	cytosol	70.2	69.16
Bra031801.1-P	Field mustard	cytosol	69.57	68.7
HORVU2Hr1G108840.1	Barley	plastid	69.33	68.57
CDY57771	Canola	cytosol, plastid	69.09	63.52
PGSC0003DMT400059487	Potato	cytosol	5.53	38.67
PGSC0003DMT400074040	Potato	cytosol	6.25	26.69
PGSC0003DMT400056132	Potato	nucleus, plastid	15.81	24.84
PGSC0003DMT400049593	Potato	cytosol, plastid	15.89	24.69
PGSC0003DMT400020288	Potato	cytosol	13.28	23.93
PGSC0003DMT400048873	Potato	cytosol	14.39	22.11
PGSC0003DMT400041748	Potato	cytosol	17.55	20.15
PGSC0003DMT400031815	Potato	cytosol	13.75	20.09
PGSC0003DMT400063759	Potato	cytosol	15.49	19.35
PGSC0003DMT400018808	Potato	cytosol	15.26	19.2
PGSC0003DMT400056995	Potato	cytosol, plastid	15.81	17.3
PGSC0003DMT400070107	Potato	cytosol	13.04	15.22

Protein Annotations

Gene3D:1.20.80.10	Gene3D:1.25.40.530	EntrezGene:102577881	PDB:1SDM	Gene3D:2.30.29.30	MapMan:20.1.3.12
Gene3D:3.10.20.90	Gene3D:3.40.850.10	PDB:3CNZ	PDB:3COB	ProteinID:AAB37756	ProteinID:AAB37756.1
InterPro:Band_41_domain	ncoils:Coil	InterPro:FERM/acyl-CoA-bd_prot_sf	InterPro:FERM_2	InterPro:FERM_N	InterPro:FERM_central
InterPro:FERM_domain	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0005886	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0008152
GO:GO:0009653	GO:GO:0009987	GO:GO:0010091	GO:GO:0016020	GO:GO:0016043	GO:GO:0016491
GO:GO:0016787	GO:GO:0030154	GO:GO:0055114	InterPro:IPR000299	InterPro:IPR000857	InterPro:IPR001752
InterPro:IPR011993	InterPro:IPR014352	InterPro:IPR036961	InterPro:IPR038185	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS
InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	EMBL:L46702	InterPro:MyTH4_dom	InterPro:MyTH4_dom_sf	RefSeq:NP_001275380.1
InterPro:P-loop_NTPase	PFAM:PF00225	PFAM:PF00373	PFAM:PF00784	PFAM:PF09379	EnsemblPlantsGene:PGSC0003DMG400009428
PGSC:PGSC0003DMG400009428	EnsemblPlants:PGSC0003DMT400024387	InterPro:PH-like_dom_sf	PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50057
PFscan:PS50067	PFscan:PS51016	PANTHER:PTHR24115	PANTHER:PTHR24115:SF162	InterPro:Prismane-like_sf	UniProt:Q41460
SMART:SM00129	SMART:SM00139	SMART:SM00295	SUPFAM:SSF47031	SUPFAM:SSF50729	SUPFAM:SSF52540
SUPFAM:SSF56821	UniParc:UPI00000AA86C	RefSeq:XP_006365006.1	RefSeq:XP_015159721.1	SEG:seg	:

Description

Kinesin heavy chain [Source:PGSC_GENE;Acc:PGSC0003DMG400009428]

Coordinates

chr2:-:27068991..27078771

Molecular Weight (calculated)

143418.0 Da

IEP (calculated)

6.854

GRAVY (calculated)

-0.525

Length

1265 amino acids

Sequence
(BLAST)

0001: MTSDMPAVSM RSSRSSFGSS NGYETPSHYS FPTSNGDDYD SDGSNFAPPT PNTLSSVLSP ELAGAIPYID RFQVEGFLKA MQKQIHSASK RGFFLKKSVG
0101: PQVREKFTFE DMLCFQREPI PTSILKLNGD LISRAVKLFQ SILKYMGIDS YDRVAPISLD ERIELVGKLF KQALKRSELR DEMFAQISKQ TRNNPERHSL
0201: IKAWELMYLC ASCMPPSKEI GGYLSEYIHT VAHGTNTDSE VQVFAINTLN ALKRSIKAGP RHTIPGREEI EAHLTGKKLT TIVFFLDETF EEITYDMATT
0301: VADAIEEVAG IIKLSAHVSF SLFECRKVVT GSKSPDLGNE EYIGLDENKY IGDLLADFKA SKDRSKGEIL HCKLIFKKKL FRESDEAVTE PMFVQLSYVQ
0401: LQHDYIMGNY PVGKEDAAQM SALQILVDIG YVDGPESCTD WTSLLERFLP RQIAMTRAKR EWELDILSRY KVMENLTKDD AKQQFLRILR TLPYGNSVFF
0501: AVRKIDDPIG LLPGKIVLGI NKRGVHFFRP VPKEYLHSAE LRDIMQFGSS NTAVFFKMRV AGVLHIFQFE TKQGEEICVA LQTHINDVML RRYSKARSSA
0601: NGSVNGDVPN NLKTANTDIN ERRIQDLSRA LEESQKKVND LVEDLHERQK QESEMQEELD GLKDNLSSEK QNLAAAAYDC DKFRSLCDEK DAELQAALTE
0701: KRNLEMRLSK LSSQGLEKNI TKELVEANNQ VLQKIQEELK ARTMDLRTAE ETKRRLLSEK ASLEEKVIGL EKKKSNEMEN LQKDFEKECK GLRLQVSELQ
0801: RKLEEAKHDL IGAQSGLEAK DKELEMLQNN LKELEELREM KEDIDRKNAQ TAAILKMQGA QLAEMEALYR EEQVLRKKYF NIIEDMKGKI RVYCRLRPLC
0901: EKEIIAKERN AIRSVDEFTV EHLWKDDKAK QHMYDRVFDG NATQDDVFED TKYLVQSAVD GYNVCIFAYG QTGSGKTFTI YGADSNPGLT PRAMSELFRI
1001: MKKDSNKFSF SLKAYMVELY QDTLVDLLLP KQAKRLKLDI KKDSKGMVSV ENVTVVSIST YEELKTIIQR GSEQRHTTGT LMNEQSSRSH LIVSVIIEST
1101: NLQTQAIARG KLSFVDLAGS ERVKKSGSAG NQLKEAQSIN KSLSALGDVI SALSSGNQHI PYRNHKLTML MSDSLGGNAK TLMFVNISPA ESNLDETHNS
1201: LTYASRVRSI VNDPSKNVSS KEVARLKKLV SYWKEQAGRK GDDEELEEIQ DERPTKDKTD GRYSM

Best Arabidopsis Sequence Match ( AT5G65930.2 )
(BLAST)

0001: MEGQRGSNSS LSSGNGTEVA TDVSSCFYVP NPSGTDFDAE SSSLPPLSPA PQVALSIPAE LAAAIPLIDR FQVEAFLRLM QKQIQSAGKR GFFYSKKSSG
0101: SNVRERFTFE DMLCFQKDPI PTSLLKINSD LVSRATKLFH LILKYMGVDS SDRSTPPSLD ERIDLVGKLF KKTLKRVELR DELFAQISKQ TRHNPDRQYL
0201: IKAWELMYLC ASSMPPSKDI GGYLSEYIHN VAHDATIEPD AQVLAVNTLK ALKRSIKAGP RHTTPGREEI EALLTGRKLT TIVFFLDETF EEISYDMATT
0301: VSDAVEELAG TIKLSAFSSF SLFECRKVVS SSKSSDPGNE EYIGLDDNKY IGDLLAEFKA IKDRNKGEIL HCKLVFKKKL FRESDEAVTD LMFVQLSYVQ
0401: LQHDYLLGNY PVGRDDAAQL CALQILVGIG FVNSPESCID WTSLLERFLP RQIAITRAKR EWELDILARY RSMENVTKDD ARQQFLRILK ALPYGNSVFF
0501: SVRKIDDPIG LLPGRIILGI NKRGVHFFRP VPKEYLHSAE LRDIMQFGSS NTAVFFKMRV AGVLHIFQFE TKQGEEICVA LQTHINDVML RRYSKARSAA
0601: NSLVNGDISC SSKPQNFEVY EKRLQDLSKA YEESQKKIEK LMDEQQEKNQ QEVTLREELE AIHNGLELER RKLLEVTLDR DKLRSLCDEK GTTIQSLMSE
0701: LRGMEARLAK SGNTKSSKET KSELAEMNNQ ILYKIQKELE VRNKELHVAV DNSKRLLSEN KILEQNLNIE KKKKEEVEIH QKRYEQEKKV LKLRVSELEN
0801: KLEVLAQDLD SAESTIESKN SDMLLLQNNL KELEELREMK EDIDRKNEQT AAILKMQGAQ LAELEILYKE EQVLRKRYYN TIEDMKGKIR VYCRIRPLNE
0901: KESSEREKQM LTTVDEFTVE HPWKDDKRKQ HIYDRVFDMR ASQDDIFEDT KYLVQSAVDG YNVCIFAYGQ TGSGKTFTIY GHESNPGLTP RATKELFNIL
1001: KRDSKRFSFS LKAYMVELYQ DTLVDLLLPK SARRLKLEIK KDSKGMVFVE NVTTIPISTL EELRMILERG SERRHVSGTN MNEESSRSHL ILSVVIESID
1101: LQTQSAARGK LSFVDLAGSE RVKKSGSAGC QLKEAQSINK SLSALGDVIG ALSSGNQHIP YRNHKLTMLM SDSLGGNAKT LMFVNVSPAE SNLDETYNSL
1201: LYASRVRTIV NDPSKHISSK EMVRLKKLVA YWKEQAGKKG EEEDLVDIEE DRTRKDEADS

Arabidopsis Description

ZWIKinesin-like calmodulin-binding protein ZWICHEL [Source:UniProtKB/TrEMBL;Acc:F4JXM5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.