Factsheet for PGSC0003DMT400070107

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
nucleus 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g016080.1.1	Tomato	nucleus	91.14	80.26
PGSC0003DMT400059487	Potato	cytosol	10.89	65.19
VIT_08s0007g08800.t01	Wine grape	cytosol	49.54	55.82
AT3G10310.2	Thale cress	cytosol	43.91	49.12
CDY08613	Canola	cytosol	37.55	48.92
KRH66897	Soybean	cytosol	45.02	48.61
KRG95233	Soybean	cytosol	46.03	48.21
CDY00920	Canola	cytosol	41.61	48.08
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	31.55	47.77
Bra029829.1-P	Field mustard	cytosol	43.82	47.74
Os01t0243100-01	Rice	cytosol	20.57	47.15
PGSC0003DMT400074040	Potato	cytosol	12.27	44.93
HORVU3Hr1G033450.10	Barley	cytosol	32.84	44.44
TraesCS3B01G196600.1	Wheat	cytosol	38.19	42.16
TraesCS3D01G172000.1	Wheat	cytosol	38.1	42.1
TraesCS3A01G169800.2	Wheat	cytosol	38.1	42.1
KXG31699	Sorghum	cytosol	37.64	40.88
Zm00001d039617_P006	Maize	cytosol	36.9	40.86
PGSC0003DMT400018808	Potato	cytosol	32.47	35.02
PGSC0003DMT400063759	Potato	cytosol	31.18	33.37
PGSC0003DMT400020288	Potato	cytosol	19.28	29.77
PGSC0003DMT400056995	Potato	cytosol, plastid	30.81	28.89
PGSC0003DMT400031815	Potato	cytosol	23.06	28.87
PGSC0003DMT400048873	Potato	cytosol	18.36	24.18
PGSC0003DMT400056132	Potato	nucleus, plastid	16.97	22.86
PGSC0003DMT400049593	Potato	cytosol, plastid	16.88	22.48
PGSC0003DMT400041748	Potato	cytosol	20.11	19.78
PGSC0003DMT400024387	Potato	cytosol, plastid	15.22	13.04

Protein Annotations

Gene3D:1.10.418.10	MapMan:20.1.3.12	Gene3D:3.40.850.10	InterPro:CH-domain	InterPro:CH_dom_sf	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016787	InterPro:IPR001715	InterPro:IPR001752	InterPro:IPR036872	InterPro:IPR036961	InterPro:Kinesin-like_fam
InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	UniProt:M1CLP5	InterPro:P-loop_NTPase	PFAM:PF00225	PFAM:PF00307
EnsemblPlantsGene:PGSC0003DMG400027257	PGSC:PGSC0003DMG400027257	EnsemblPlants:PGSC0003DMT400070107	PRINTS:PR00380	PFscan:PS50021	PFscan:PS50067
PANTHER:PTHR24115	PANTHER:PTHR24115:SF456	SMART:SM00033	SMART:SM00129	SUPFAM:SSF47576	SUPFAM:SSF52540
UniParc:UPI000296B34E	SEG:seg	:	:	:	:

Description

Kinesin heavy chain [Source:PGSC_GENE;Acc:PGSC0003DMG400027257]

Coordinates

chr4:+:10546656..10555937

Molecular Weight (calculated)

119410.0 Da

IEP (calculated)

9.953

GRAVY (calculated)

-0.599

Length

1084 amino acids

Sequence
(BLAST)

0001: ALRRYQATHW LECFVGPLGI SSQPSEREFV SCLRSGLVLC NLINKVQTGS VPKVVEDHTP SQSIMWDSQP LPAYQYFENI RNFLVAVEDL KLPAFEASVF
0101: ERDNIEAGSS TKVVDCILEL KAYHEWKQMT GGVGCYKPLR SPLLTPSRGR IQAQTHVTIN SDSRRRLEMS ASFPKQSPSE DEIQKLEGDQ VLDMSNAALG
0201: YHKVMKENRS LHNMVQDLKG NIRVYCRIRP AFNAEAKTAI DFIGEDGSLV VIDPLKSWKE GRKIFQFNRV FGPSAAQEDV FRDTKPLVRS VMDGYNVCIF
0301: AYGQTGSGKT YTMSGPGGGS IKEFGINQLA LNDLFILSDE RKDIMSYKIH VQMVEIYNEQ IHDLLADDSL LTKYPFTELF LSLHQISSCM SGNGLPLPDA
0401: SMHPVNCATD VIELMKLGDL NRAVGCTAMN NRSSRSHSVL TVHVHGEDTS GNIIHSCLHL VDLAGSERVD KSEVTGDSLK EAQHINKSLS CLGDVITALA
0501: QKNSHIPYRN SKLTLLLQNS LGGHAKTLMF AHVSPEGDSF GETISTLKFA QRVSSVELGA ARLNKESIEV LELKAEIETL KRALANKEAL TPQINKTKEA
0601: ARTPFQKPKP IGERSTPRAR RLSIENCTTT VRTEKANLDD EKGSKTPAVK TRSRRLSLEG PRLASKNLEH IKLLELTSKR DQQEVVCLQQ STELQEGDDV
0701: TKLYDQAGND SCLKAPLSPP FAFRSQDALQ SPASGLKYQQ APRSPTFGFK IQQAPQGPTS GFKSQQPPRS PTSSYKSQQA PRSPTSGFKS QQAPRSPTPT
0801: YKSQQPPRSP TSGFKSQQAP PSPTPGFKSQ QAPRSPTPTY KSQQPPRSPI SGFKSQQAPL SPTSGFKSQQ APRSPTPTYK SQQPPRSPTS GFKSQQAPLS
0901: PTSAFKSCNA PRSPTSAAIK SQGVKLTDNR TRIPSLQLPK TPEPLITSIN ENKEGMQSER TISSEVQTPS LISRTHGKGS QIRRSLRTIG KLINGSERKN
1001: QQKKSEAASL PLNCLNEETS SMTSNARTLR RQSLTGIPPP IMSRRSSLGG GSLPDSSYTH CNFRRRNAVN INISVQITEA ENRN

Best Arabidopsis Sequence Match ( AT3G10310.2 )
(BLAST)

001: MTTGLHEFNL ASRRAEEAAA RRFQAVQWLK SVVGQLGIPN QPSEKEFISC LRNGMILCNA INKIHPGAVS KVVENYSYLN GEYQLPPAYQ YFENVRNFLV
101: ALETLRLPGF EASDLEKDNL ESGSVTKVVD CILGLKAYHE CKLPSNGNGL YKHVKTPTFQ LSATKIHPTL SASKTSRHLD MSSVRERNDC TDGESDKLKG
201: IAKLFADHIF SSKENIDENL VSLENGSENS RANFEKILSR FPELQSVFKN LLSEGTLKPS DLKSMPLEEL PVHEEDQSSR SLSHKTKCNH KRLLKTQEKE
301: LAVLKNLFIK TKQDFKEFQV YLQRDLMELG NQMQEMSSAA QGYYKVVEEN RKLYNMVQDL KGNIRVYCRV RPIFNSEMDG VIDYIGKDGS LFVLDPSKPY
401: KDARKTFQFN QVFGPTATQD DVFRETQPLI RSVMDGYNVC IFAYGQTGSG KTYTMSGPPG RSATEMGINY LALSDLFLIC DRRKDMMTYE IYVQMVEIYN
501: EQVRDLLAEN SSCTRLDIRT CSSDDDGLSL PDATMHSVNS TKDVLQLMEA GEVNRAVSST SMNNRSSRSH SIFMVHVRGK DTSGGTLRSC LHLVDLAGSE
601: RVDKSEVTGD RLKEAQYINK SLSCLGDVIS ALAQKNSHIP YRNSKLTLLL QDSLGGQAKT LMFAHLSPEE DSFGETISTL KFAQRVSTVE LGAARAHKET
701: REVMHLKEQI ENLKRALGTE EWNNVSNGSK EIKSPFSRPI ATTERTPPRL RRLSIENCSS TKANLEDRRG IKSPLASRRA QILSLEGPMS CKNEENGKGD
801: PTMEVHQLKN PRSPLSSYQN RAVKVDGRTS IPQLQLLQTP VKGASRNDIQ MISVDSKTNG KGSHIRKSLR TIGKLINGSE KRKENIPADP RSPLGVANNF
901: SHIKSPDTSN AKTMRRQSLT GVMPPGQERS RRSSIGGKPI ENGVNVTDSR NAKTPPPMRS ASKIGKKWA

Arabidopsis Description

P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMT1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.