Factsheet for Zm00001d039617_P006

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG31699	Sorghum	cytosol	90.7	88.98
HORVU3Hr1G033450.10	Barley	cytosol	60.88	74.41
TraesCS3A01G169800.2	Wheat	cytosol	71.4	71.25
TraesCS3D01G172000.1	Wheat	cytosol	71.3	71.15
TraesCS3B01G196600.1	Wheat	cytosol	71.3	71.08
Os01t0243100-01	Rice	cytosol	34.22	70.82
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	40.55	55.45
VIT_08s0007g08800.t01	Wine grape	cytosol	46.78	47.61
CDY08613	Canola	cytosol	39.33	46.27
KRH66897	Soybean	cytosol	46.58	45.42
AT3G10310.2	Thale cress	cytosol	44.64	45.1
CDY00920	Canola	cytosol	42.59	44.46
KRG95233	Soybean	cytosol	46.99	44.44
Bra029829.1-P	Field mustard	cytosol	44.64	43.92
PGSC0003DMT400070107	Potato	cytosol	40.86	36.9
Solyc04g016080.1.1	Tomato	nucleus	45.15	35.91
Zm00001d023841_P008	Maize	cytosol	34.12	35.01
Zm00001d028830_P009	Maize	cytosol, plastid	19.61	34.04
Zm00001d047677_P016	Maize	cytosol	32.79	31.44
Zm00001d043504_P030	Maize	cytosol	29.52	29.55
Zm00001d003368_P001	Maize	cytosol	31.87	29.52
Zm00001d012763_P002	Maize	cytosol	25.33	28.44
Zm00001d007712_P003	Maize	plastid	31.46	27.92
Zm00001d010790_P017	Maize	cytosol, endoplasmic reticulum, nucleus	29.11	27.59
Zm00001d038131_P004	Maize	cytosol	20.43	24.18
Zm00001d009926_P001	Maize	cytosol	20.22	23.71
Zm00001d038797_P001	Maize	cytosol	20.33	23.66
Zm00001d002186_P001	Maize	cytosol	18.08	22.78
Zm00001d041323_P003	Maize	nucleus	20.84	21.68
Zm00001d027337_P001	Maize	cytosol	24.11	21.18
Zm00001d031074_P002	Maize	nucleus	20.74	21.12
Zm00001d016273_P001	Maize	cytosol	27.58	20.26
Zm00001d036987_P001	Maize	cytosol, plastid	20.53	19.14
Zm00001d018624_P001	Maize	cytosol	16.14	19.11
Zm00001d001928_P006	Maize	cytosol, plastid	17.26	13.29
Zm00001d026548_P049	Maize	cytosol	16.85	12.85

Protein Annotations

Gene3D:1.10.418.10	EntrezGene:103649672	MapMan:20.1.3.12	Gene3D:3.40.850.10	UniProt:A0A1D6MJQ5	InterPro:CH-domain
InterPro:CH_dom_sf	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0005874	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016787	InterPro:IPR001715	InterPro:IPR001752	InterPro:IPR036872	InterPro:IPR036961
InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	ProteinID:ONM29515.1	InterPro:P-loop_NTPase
PFAM:PF00225	PFAM:PF00307	PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50021	PFscan:PS50067
PANTHER:PTHR24115	PANTHER:PTHR24115:SF456	SMART:SM00033	SMART:SM00129	SUPFAM:SSF47576	SUPFAM:SSF52540
UniParc:UPI0004DEAC0A	EnsemblPlantsGene:Zm00001d039617	EnsemblPlants:Zm00001d039617_P006	EnsemblPlants:Zm00001d039617_T006	SEG:seg	:

Description

P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain

Coordinates

chr3:-:9147898..9161936

Molecular Weight (calculated)

107748.0 Da

IEP (calculated)

9.274

GRAVY (calculated)

-0.478

Length

979 amino acids

Sequence
(BLAST)

001: MTEPRRVSFR DGCLASRKAE EAAWRRHQAA AWLQAMVGSL GLPPYPSEQE FVASLRNGIV LCKAINKLQP GAVTKIITNA PSNSQPLTAF QYFENIRNFL
101: VAVNKLKLTS FEASDLDKDN LDAGTVGKIV DCVISLKSYH EWKQAGGANG PNKYMKSPLA VRSSQIQSEN VASGPSPSLK RLDLTEVDAD TQTFQNLDPN
201: MKDCAFADAV EKLQKVIVDS MLSSKENIDQ DILKKVPSKL IGAVLASQLG KEQFKHLQLL SPEKLIAENE PTHCIEHPNS PIESKQLLLQ AHETELLDLK
301: KMFQDVKVNF RSLQTQFRDD MAKLGENIQD LSKAALGYNQ AVKENRNLYN MLQELRGNIR VFCRIRPLLH SESISSIEHV GTDGSVMVCD PVKPQSAHKI
401: FQFNKVFGPT TTQDEVYKET QPLVRSVMDG YNVCIFAYGQ TGSGKTHTMC GPSGGLSKDY GINYMALNDL FNISTSREDV KYDIRVQMVE IYNEQVRDLL
501: NEDRSSTKLD IRASLNNGLS NLPDAKICPV QSPSDVINLM QLGEKHRASG STAMNHRSSR SHSILTVHVN GKDIAGNVSR SSLHLVDLAG SERVDRSEAT
601: GDRLKEAQHI NKSLSCLGDV INALAQKNSH IPYRNSKLTQ LLQSSLGGNA KMLMFAHISP DAESCAETLS TLKFAQRAST VELGTALANK ESSEVRELKE
701: QVDTLKKALA SKELEKTTLK VKGSATTSER TKQVLDCTPP RPRRLSLENA SDKARMPERK ILKSPRSAVG ITHDKECNTD AFRHANHHES LIQMSAACAE
801: VLVREEEKII CTVDTVEFCQ LPTEAYNLLK QSGLNTPEAA PCRSRNLRTE ASCGDALSST TKLEKIMAGT AVKKGSQLKK SIQSSIGRLI HGTERRNAQH
901: SAQGTPTKII ASGCHNNVSP VTADIRLRRR QSLTGIPPPL PTMSRRSSLG GRSDTSSNDK RGAKTPPPVN SAAKAKRWL

Best Arabidopsis Sequence Match ( AT3G10310.2 )
(BLAST)

001: MTTGLHEFNL ASRRAEEAAA RRFQAVQWLK SVVGQLGIPN QPSEKEFISC LRNGMILCNA INKIHPGAVS KVVENYSYLN GEYQLPPAYQ YFENVRNFLV
101: ALETLRLPGF EASDLEKDNL ESGSVTKVVD CILGLKAYHE CKLPSNGNGL YKHVKTPTFQ LSATKIHPTL SASKTSRHLD MSSVRERNDC TDGESDKLKG
201: IAKLFADHIF SSKENIDENL VSLENGSENS RANFEKILSR FPELQSVFKN LLSEGTLKPS DLKSMPLEEL PVHEEDQSSR SLSHKTKCNH KRLLKTQEKE
301: LAVLKNLFIK TKQDFKEFQV YLQRDLMELG NQMQEMSSAA QGYYKVVEEN RKLYNMVQDL KGNIRVYCRV RPIFNSEMDG VIDYIGKDGS LFVLDPSKPY
401: KDARKTFQFN QVFGPTATQD DVFRETQPLI RSVMDGYNVC IFAYGQTGSG KTYTMSGPPG RSATEMGINY LALSDLFLIC DRRKDMMTYE IYVQMVEIYN
501: EQVRDLLAEN SSCTRLDIRT CSSDDDGLSL PDATMHSVNS TKDVLQLMEA GEVNRAVSST SMNNRSSRSH SIFMVHVRGK DTSGGTLRSC LHLVDLAGSE
601: RVDKSEVTGD RLKEAQYINK SLSCLGDVIS ALAQKNSHIP YRNSKLTLLL QDSLGGQAKT LMFAHLSPEE DSFGETISTL KFAQRVSTVE LGAARAHKET
701: REVMHLKEQI ENLKRALGTE EWNNVSNGSK EIKSPFSRPI ATTERTPPRL RRLSIENCSS TKANLEDRRG IKSPLASRRA QILSLEGPMS CKNEENGKGD
801: PTMEVHQLKN PRSPLSSYQN RAVKVDGRTS IPQLQLLQTP VKGASRNDIQ MISVDSKTNG KGSHIRKSLR TIGKLINGSE KRKENIPADP RSPLGVANNF
901: SHIKSPDTSN AKTMRRQSLT GVMPPGQERS RRSSIGGKPI ENGVNVTDSR NAKTPPPMRS ASKIGKKWA

Arabidopsis Description

P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMT1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.