Factsheet for Zm00001d028830_P009

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid, secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94990	Sorghum	cytosol	94.68	52.61
TraesCS4D01G188000.1	Wheat	cytosol	85.46	48.25
TraesCS4B01G186700.1	Wheat	cytosol	85.28	48.2
TraesCS4A01G117700.1	Wheat	cytosol	84.93	47.95
HORVU4Hr1G054600.6	Barley	cytosol	84.93	47.95
Zm00001d047677_P016	Maize	cytosol	83.69	46.23
GSMUA_Achr8P10440_001	Banana	cytosol	63.65	38.27
AT2G47500.1	Thale cress	cytosol	60.99	34.99
KRH31841	Soybean	cytosol	62.23	34.68
KRH69263	Soybean	cytosol	61.7	34.59
CDY57719	Canola	cytosol	60.28	34.55
CDX80111	Canola	cytosol	60.28	34.34
VIT_07s0005g00940.t01	Wine grape	cytosol	62.41	34.34
Solyc06g009780.2.1	Tomato	nucleus	61.17	34.33
PGSC0003DMT400018808	Potato	cytosol	60.99	34.23
VIT_14s0060g01570.t01	Wine grape	cytosol	61.52	34.12
Solyc09g075480.2.1	Tomato	nucleus	59.75	33.7
KRG96486	Soybean	cytosol	59.75	33.4
Bra004451.1-P	Field mustard	cytosol	54.43	32.73
KRH68226	Soybean	cytosol	59.57	32.65
PGSC0003DMT400063759	Potato	cytosol	56.21	31.29
Solyc01g100120.2.1	Tomato	cytosol	56.03	31.13
CDY53341	Canola	cytosol	50.53	30.98
CDY19745	Canola	cytosol	51.24	30.81
KRG96746	Soybean	cytosol	55.5	30.54
AT5G27000.1	Thale cress	cytosol	53.37	30.5
KRH68465	Soybean	cytosol	54.96	30.42
KRH33856	Soybean	cytosol	52.66	30.09
Zm00001d023841_P008	Maize	cytosol	50.89	30.08
CDX80606	Canola	cytosol	52.84	30.01
Bra009929.1-P	Field mustard	cytosol	48.58	29.03
CDX88251	Canola	cytosol	48.76	28.98
CDY32155	Canola	cytosol	49.11	27.87
CDY31108	Canola	cytosol	48.05	27.79
AT1G09170.5	Thale cress	cytosol	50.71	27.34
Bra036604.1-P	Field mustard	cytosol	37.77	27.06
Bra030760.1-P	Field mustard	cytosol	45.74	27.04
Zm00001d007712_P003	Maize	plastid	51.95	26.56
CDY67329	Canola	cytosol	35.28	24.27
Zm00001d003368_P001	Maize	cytosol	38.83	20.72
Zm00001d038797_P001	Maize	cytosol	30.85	20.69
Zm00001d043504_P030	Maize	cytosol	34.22	19.73
Zm00001d039617_P006	Maize	cytosol	34.04	19.61
Zm00001d010790_P017	Maize	cytosol, endoplasmic reticulum, nucleus	33.51	18.3
Zm00001d012763_P002	Maize	cytosol	26.95	17.43
Zm00001d036987_P001	Maize	cytosol, plastid	29.96	16.1
Zm00001d002186_P001	Maize	cytosol	19.15	13.9
Zm00001d018624_P001	Maize	cytosol	18.44	12.58
Zm00001d016273_P001	Maize	cytosol	28.01	11.85
Zm00001d009926_P001	Maize	cytosol	16.13	10.9
Zm00001d038131_P004	Maize	cytosol	15.78	10.76
Zm00001d027337_P001	Maize	cytosol	20.74	10.5
Zm00001d041323_P003	Maize	nucleus	17.2	10.31
Zm00001d031074_P002	Maize	nucleus	16.84	9.89
Zm00001d001928_P006	Maize	cytosol, plastid	21.1	9.36
Os03t0301800-01	Rice	cytosol	8.16	9.02
Zm00001d026548_P049	Maize	cytosol	20.39	8.96

Protein Annotations

Gene3D:1.10.418.10	EntrezGene:100381956	MapMan:20.1.3.12	Gene3D:3.40.850.10	UniProt:A0A1D6K037	InterPro:CH-domain
InterPro:CH_dom_sf	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	InterPro:IPR001715	InterPro:IPR001752	InterPro:IPR036872
InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	ProteinID:ONL97171.1	ProteinID:ONL97177.1
InterPro:P-loop_NTPase	PFAM:PF00307	PFAM:PF16796	PFscan:PS50021	PFscan:PS50067	PANTHER:PTHR24115
PANTHER:PTHR24115:SF438	SMART:SM00033	SMART:SM00129	SUPFAM:SSF47576	SUPFAM:SSF52540	UniParc:UPI00084381B0
InterPro:Vik1/Cik1_MT-bd	EnsemblPlantsGene:Zm00001d028830	EnsemblPlants:Zm00001d028830_P009	EnsemblPlants:Zm00001d028830_T009	SEG:seg	:

Description

P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain

Coordinates

chr1:-:47982387..47988543

Molecular Weight (calculated)

62011.8 Da

IEP (calculated)

8.654

GRAVY (calculated)

-0.426

Length

564 amino acids

Sequence
(BLAST)

001: MSEAVAILSL SASAVVEDVL RQHGCRLSDR DLASRRAEEA AGRRNEAAGW LRRTVGAVAA RDLPEEPSEE EFRLGLRNGQ ILCGALNRVH PGAVPKVVVN
101: TAADSVLQAD GAALSAFQYF ENVRNFLVAA QEIGLPCFEA SDLEQGGKSA RVVNCVLALK SYGDWKQCGG TGPWKYGGNL KPSVSGKSGH GRKNSEPFRR
201: SQSINEGEVP YEEAGFNGDA HFDSSDMSTS RPLKMLVSAV LSDKRPDEVP QLLESMLSKL VEEFENRLNS QNELVKAALK SGIDNTKSFS KSKVLVETPP
301: NTSGRKMDTG DIYCNHKKTK KEASREVALK QHLILQQQSK NVEELKSDLI TTRAGMEYMQ MKYSEDLNLL GRHLFSLAHA ASGYHKVLEE NRKLYNQVQD
401: LKGSIRVYCR VRPFLPGQAS PSTVGSIDEG NITIVTPSKS GKEGRKTFSF NKVFGPSATQ AEVFLDTQPL IRSVLDGYNV CIFAYGQTGS GKTYTMSGPK
501: NMTEQTQGVN YRALGDLFKL AEQRKGTFIY DIAVQMIEIY NEQVRDLLVS DGLNKKFGII LKMG

Best Arabidopsis Sequence Match ( AT1G09170.2 )
(BLAST)

001: MATEQQDSQL CLATILEDFL KQRNIQVSVG VDSSSLKKAD ETFGGRDLPV DPSDLRRYEA ARWVRNTLGV VGGRDLPADP SEEDFRIALR SGILLCNVLN
101: RVKPGAVPKV VEAPNDPLVN QDGAALSAFQ YFENLRNFLV FVEEMGIPTF EVSDFEKGGK SARIVECVLA LKSYREWKQS GGSGTWRYIL NSKPTTFGIA
201: KQYKRKDSEV PVDAVTNSPS STPSSEQPLL DQSDSNTKND GTASSIDAIV RAVFSDMKQE DIPVIVEDML KSVMVEYERR LATQNELLLM SAGNRDKLGS
301: GDLGRTISGN EETLSDASYG EENVTEIVNN NMEASQDSNV EELENQDYEL YAISKEKTEK QQLIIERQQT HTEELKHDLK AVKAGLSLLQ MKYQQEFTSL
401: GKHLHGLTYA ATGYQRVLEE NRKLYNQVQD LKGSIRVYCR VRPFLPGQKS VLTTVDHLED STLSIATPSK YGKEGQKTFT FNKVFGPSAS QEAVFADTQP
501: LIRSVLDGYN VCIFAYGQTG SGKTFTMMGP NELTDETLGV NYRALSDLFH LSSVRKETFS YNISVQMLEI YNEQVRDLLA TNGQTSRLEI RNSTQDGINV
601: PEATLVPVST TSDVIHLMNI GQKNRAVSAT AMNDRSSRSH SCLTVHVQGK DLTSGVTLRG SMHLVDLAGS ERIDKSEVTG DRLKEAQHIN KSLSALGDVI
701: ASLSQKNNHI PYRNSKLTQL LQDALGGQAK TLMFIHISPE LEDLGETLST LKFAERVATV DLGAARVNKD TSEVKELKEQ IASLKLALAR KESGADQTQL
801: QRPLTPDKLL RKKSLGVSSS FSKSANSTRQ VQTKHKPSQI DDVNSIEVKG TRKLIHQTKQ IKLVNTFCSD YFMMCSEITC RVKVTLHLAL TYKD

Arabidopsis Description

P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain [Source:TAIR;Acc:AT1G09170]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.