Factsheet for Zm00001d036987_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG20162	Sorghum	cytosol	78.38	68.07
HORVU7Hr1G088620.8	Barley	cytosol	60.1	54.73
TraesCS7B01G271700.2	Wheat	cytosol	62.19	53.66
TraesCS7A01G356000.1	Wheat	cytosol	61.9	53.24
TraesCS7D01G366700.2	Wheat	cytosol	61.62	53.16
Os06t0554700-01	Rice	cytosol	21.14	47.54
GSMUA_Achr1P02560_001	Banana	cytosol	27.43	47.14
GSMUA_Achr4P25620_001	Banana	cytosol	38.57	36.82
VIT_02s0025g03480.t01	Wine grape	cytosol	36.95	36.36
Zm00001d016273_P001	Maize	cytosol	45.33	35.71
VIT_17s0000g03700.t01	Wine grape	cytosol	34.0	35.38
Zm00001d038797_P001	Maize	cytosol	28.0	34.96
Solyc06g069130.2.1	Tomato	cytosol, nucleus	32.19	34.04
CDX73023	Canola	cytosol, plastid	28.67	33.63
KRH59901	Soybean	cytosol	34.76	33.61
KRH41185	Soybean	cytosol	34.57	33.55
KRH39191	Soybean	cytosol	29.33	33.41
PGSC0003DMT400031815	Potato	cytosol	27.52	33.37
CDY19209	Canola	plastid	28.95	32.58
CDY45358	Canola	cytosol	32.86	32.46
CDY34366	Canola	cytosol	32.19	32.44
CDY62807	Canola	cytosol	32.95	32.43
CDX96493	Canola	cytosol, plastid	29.05	32.38
AT1G63640.3	Thale cress	cytosol	33.05	32.37
Bra027652.1-P	Field mustard	cytosol	32.76	32.33
CDY25511	Canola	cytosol	31.9	32.15
CDY46382	Canola	cytosol	27.62	31.66
Bra027797.1-P	Field mustard	cytosol	32.67	31.55
Zm00001d012763_P002	Maize	cytosol	26.19	31.54
AT5G41310.1	Thale cress	cytosol	28.67	31.32
Zm00001d043504_P030	Maize	cytosol	29.14	31.29
CDY11085	Canola	cytosol, plastid	30.1	31.23
CDX68208	Canola	cytosol, plastid	30.0	31.13
Bra003825.1-P	Field mustard	cytosol, plastid	29.81	30.87
KRH41631	Soybean	cytosol	30.86	30.74
GSMUA_Achr7P08590_001	Banana	cytosol	35.81	30.64
AT1G73860.1	Thale cress	cytosol, plastid	29.81	30.54
Zm00001d010790_P017	Maize	cytosol, endoplasmic reticulum, nucleus	29.81	30.3
CDY39749	Canola	cytosol	27.33	30.08
Bra025509.1-P	Field mustard	cytosol	27.9	29.99
Zm00001d028830_P009	Maize	cytosol, plastid	16.1	29.96
Solyc12g036810.1.1	Tomato	extracellular	27.43	29.91
KRH60336	Soybean	cytosol	34.67	29.38
PGSC0003DMT400074040	Potato	cytosol	8.19	29.05
Bra025908.1-P	Field mustard	cytosol, plastid	29.33	28.6
CDY26163	Canola	plastid	29.33	28.31
PGSC0003DMT400059487	Potato	cytosol	4.67	27.07
AT1G18410.4	Thale cress	cytosol	29.52	26.89
Bra015957.1-P	Field mustard	cytosol, plastid	20.57	25.84
Zm00001d023841_P008	Maize	cytosol	20.57	22.64
Zm00001d047677_P016	Maize	cytosol	21.33	21.94
Zm00001d039617_P006	Maize	cytosol	19.14	20.53
Zm00001d003368_P001	Maize	cytosol	19.71	19.58
Zm00001d007712_P003	Maize	plastid	20.57	19.58
Zm00001d002186_P001	Maize	cytosol	12.86	17.37
Zm00001d038131_P004	Maize	cytosol	12.86	16.32
Zm00001d041323_P003	Maize	nucleus	14.38	16.05
Zm00001d009926_P001	Maize	cytosol	12.67	15.93
Zm00001d018624_P001	Maize	cytosol	12.38	15.72
Zm00001d031074_P002	Maize	nucleus	13.9	15.19
Zm00001d027337_P001	Maize	cytosol	15.81	14.9
Zm00001d001928_P006	Maize	cytosol, plastid	12.86	10.61
Zm00001d026548_P049	Maize	cytosol	12.38	10.12

Protein Annotations

MapMan:20.1.3.12	Gene3D:3.40.850.10	UniProt:A0A1D6LT48	ProteinID:AQK82591.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787
InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase
PFAM:PF16796	PRINTS:PR00380	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF455	SMART:SM00129
SUPFAM:SSF52540	UniParc:UPI00084383AF	InterPro:Vik1/Cik1_MT-bd	EnsemblPlantsGene:Zm00001d036987	EnsemblPlants:Zm00001d036987_P001	EnsemblPlants:Zm00001d036987_T001
SEG:seg	:	:	:	:	:

Description

P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain

Coordinates

chr6:-:108388200..108395354

Molecular Weight (calculated)

117599.0 Da

IEP (calculated)

8.138

GRAVY (calculated)

-0.551

Length

1050 amino acids

Sequence
(BLAST)

0001: MALGLGRGKG RRQGVVAAHQ QGTTFPRHPH VAHSPTSPSV FPIRARPFLL HVSRLPVANY ASVSDPGTAA QFEAPNVSAV SGLPARFHPH GGASAAAAAG
0101: SDVERFVAAM ERLGLPSFAA SDHDRGPMLA VIVCLLALRG LFGSNVGEGL HCSLEAKSRM HNMEFPIRVN GCCTQNCQSR EKGEGSIPKV SRSPATSEPS
0201: SPISMPELSS ISRHTRHNFH EVFHLRQGIY SDMPISKVLE IMKSTNLDNA PTQSLLSFVN AILDRIIENE NGEIPYQNSL IRAREEKYKS RIRVLEALAS
0301: GTGGQMQINS SAANGKINVS SSFHLKPIMM NRQFFYYTFI LQINKSKIGE RRLVDKDMSS LMAQKEDVAR LTKDKEDMVR LLKDKEDIIR LMKEKEEMVL
0401: LIKEKDDMVT SRKEKIDGRD QSANAYANKS TTYNDETIRM IKEKEDSNIT IMKLKSKLEA VKSLFEESHN QLESAKEEVL KLQKDKENSA NIISKLRQEL
0501: SLAHESYKTH IQELESSALQ ASKFFEHRIK EVDLMLEDSI KKRTDLEEVL KSRMDTWKKK EIMVNQVLRL QIQSIQDLRL SSVSIRHEIQ NCQRRWSEEL
0601: NGLGQSLNIL INDSENYHAA LEENRKLYNE IQELKGNIRV YCRIRPFIPG EDQKSTTIKY VGDNGDLIIA NPTRHGKEGS KSFKFNKVFG PTTSQDDVFK
0701: DIEPLIRSVL DGYNVCIFAY GQTGSGKTYT MTGPENATEN EWGVNYRALN DLFHISHNRG DTIMYEINVQ MIEIYNEQIR DLLCSNGSEK KYPFPLHLLN
0801: SQTMSTLSTS GGHAKTLMFV QINPDVSSYS ETLSTLKFAE RVSGVELGAS KANKEGKDIR EFMEQLSLLK HKMAKKDDEI NRLQQLKTQT PRVRTAKRAD
0901: SPLKHSSSSP GISNLGSKIQ HRRTVSSGKA MSIASRAGSD TFSDTSDRHS ESGSMQSVDD ILPRRGIMGL PKLSIGEMGQ NSADPELVCF DYADSEERLS
1001: DISDSGLSMG TETDVSVSSI VELTRFQEQE NIPSTLKEQE SARKIPNDQL

Best Arabidopsis Sequence Match ( AT1G18410.2 )
(BLAST)

0001: MMNSLTDQSG SSHGGSTPRS PFSPSSPRER HNKGLADSRF QRPLPNSSAL DPSSPGSMLH GGHKSHEAFQ MKQGRFDLQA AKISELMKSN NLDNAPTQSL
0101: LSIVNGILDE TIERKNGELP QRVACLLRKV VQEIERRIST QSEHLRTQNS VFKAREEKYQ SRIKVLETLA SGTSEENEIA TRQLRRIKTE KSKLEEKKKD
0201: KEEDMVGIEK ENGHYNLEIS TLRRELETTK KAYEQQCLQM ESKTKGATAG IEDRVKELEQ MRKDASVARK ALEERVRELE KMGKEADAVK MNLEEKVKEL
0301: QKYKDETITV TTSIEGKNRE LEQFKQETMT VTTSLEAQNR ELEQAIKETM TVNTSLEAKN RELEQSKKET MTVNTSLKAK NRELEQNLVH WKSKAKEMEE
0401: KSELKNRSWS QKELSYRSFI SFQCQALQEL RFYSKSIKQE ILKVQDKYTV EFSQLGRKLL ELGDAAANYH EVLTENQKLF NELQELKGNI RVYCRVRPFL
0501: RGQGASKTVV EHIGDHGELV VLNPTKPGKD AHRKFRFNKV YSPASTQAEV FSDIKPLIRS VLDGYNVCIF AYGQTGSGKT YTMTGPDGAS EEEWGVNYRA
0601: LNDLFRISQS RKSNIAYEVG VQMVEIYNEQ VRDLLSGDSS QKKLGILSTT QQNGLAVPDA SMYPVTSTSD VLELMSIGLQ NRVVSSTALN ERSSRSHSIV
0701: TVHVRGKDLK TGSALYGNLH LVDLAGSERV DRSEVTGDRL KEAQHINKSL SALGDVIFSL ASKSSHVPYR NSKLTQLLQS SLGGRAKTLM FVQLNPDITS
0801: YSESMSTLKF AERVSGVELG AAKSSKDGRD VRELMEQLGS LKDTIARKDD EIERLHLLKD INYPQRLQKK SLGQSDDFNS EAGDSQLSIE DDSRFQHDYT
0901: RQSRHSVTDG EALASSTDAE YDDETEGSTD APCAAEGRKP LKISDKPKPV TPRSNTTTSR PLDKLKQVTM RTTNIAKATS ALLSPSSQGM KKTGSASNFL
1001: KSPKDSKRWS

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT1G18410]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.