Factsheet for Zm00001d038797_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU78322	Sorghum	cytosol	84.66	73.94
Zm00001d010790_P017	Maize	cytosol, endoplasmic reticulum, nucleus	84.78	69.02
Os05t0521300-04	Rice	cytosol	70.27	58.4
Zm00001d012763_P002	Maize	cytosol	56.0	54.01
Zm00001d043504_P030	Maize	cytosol	60.4	51.94
TraesCS1D01G343800.1	Wheat	cytosol	66.35	50.09
TraesCS1A01G341500.1	Wheat	cytosol	66.11	49.91
TraesCS1B01G354200.2	Wheat	cytosol	65.87	49.73
GSMUA_AchrUn_...	Banana	cytosol	50.77	41.02
Solyc06g069130.2.1	Tomato	cytosol, nucleus	45.54	38.57
VIT_17s0000g03700.t01	Wine grape	cytosol	46.14	38.45
VIT_02s0025g03480.t01	Wine grape	cytosol	48.16	37.96
CDY19209	Canola	plastid	39.12	35.26
CDX73023	Canola	cytosol, plastid	37.46	35.2
PGSC0003DMT400031815	Potato	cytosol	35.91	34.87
CDX96493	Canola	cytosol, plastid	38.76	34.61
CDY46382	Canola	cytosol	37.57	34.5
HORVU1Hr1G075920.5	Barley	cytosol	48.28	34.38
AT1G73860.1	Thale cress	cytosol, plastid	41.26	33.85
CDY34366	Canola	cytosol	41.5	33.49
CDY25511	Canola	cytosol	41.38	33.4
PGSC0003DMT400059487	Potato	cytosol	7.13	33.15
CDX68208	Canola	cytosol, plastid	39.71	33.0
KRH59901	Soybean	cytosol	42.57	32.97
Bra003825.1-P	Field mustard	cytosol, plastid	39.71	32.94
AT1G63640.3	Thale cress	cytosol	41.97	32.93
CDY45358	Canola	cytosol	41.5	32.83
KRH41185	Soybean	cytosol	42.21	32.81
CDY39749	Canola	cytosol	37.22	32.81
CDY11085	Canola	cytosol, plastid	39.48	32.81
Bra027652.1-P	Field mustard	cytosol	41.5	32.8
KRH39191	Soybean	cytosol	35.91	32.75
CDY62807	Canola	cytosol	41.38	32.61
Bra025509.1-P	Field mustard	cytosol	37.81	32.55
Bra027797.1-P	Field mustard	cytosol	41.38	32.01
AT5G41310.1	Thale cress	cytosol	36.27	31.74
Solyc12g036810.1.1	Tomato	extracellular	35.55	31.05
Zm00001d028830_P009	Maize	cytosol, plastid	20.69	30.85
CDY26163	Canola	plastid	39.24	30.33
KRH60336	Soybean	cytosol	42.57	28.89
AT1G18410.4	Thale cress	cytosol	39.6	28.88
Bra025908.1-P	Field mustard	cytosol, plastid	36.98	28.88
PGSC0003DMT400074040	Potato	cytosol	9.99	28.38
KRH41631	Soybean	cytosol	35.43	28.27
Zm00001d036987_P001	Maize	cytosol, plastid	34.96	28.0
Bra015957.1-P	Field mustard	cytosol, plastid	26.99	27.15
Zm00001d016273_P001	Maize	cytosol	39.12	24.68
Zm00001d023841_P008	Maize	cytosol	27.82	24.53
Zm00001d047677_P016	Maize	cytosol	26.99	22.23
Zm00001d007712_P003	Maize	plastid	27.23	20.76
Zm00001d039617_P006	Maize	cytosol	23.66	20.33
Zm00001d003368_P001	Maize	cytosol	25.45	20.25
Zm00001d002186_P001	Maize	cytosol	16.05	17.37
Zm00001d038131_P004	Maize	cytosol	15.46	15.72
Zm00001d009926_P001	Maize	cytosol	15.46	15.57
Zm00001d018624_P001	Maize	cytosol	14.98	15.24
Zm00001d041323_P003	Maize	nucleus	16.77	14.98
Zm00001d031074_P002	Maize	nucleus	16.65	14.57
Zm00001d027337_P001	Maize	cytosol	18.19	13.73
Zm00001d001928_P006	Maize	cytosol, plastid	16.41	10.85
Zm00001d026548_P049	Maize	cytosol	15.93	10.44

Protein Annotations

Gene3D:1.10.418.10	MapMan:20.1.3.12	Gene3D:3.40.850.10	UniProt:A0A1D6MAM0	ProteinID:AQK87825.1	InterPro:CH-domain
InterPro:CH_dom_sf	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	InterPro:IPR001715	InterPro:IPR001752	InterPro:IPR036872
InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00307
PFAM:PF16796	PFscan:PS50021	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF716	SMART:SM00033
SMART:SM00129	SUPFAM:SSF47576	SUPFAM:SSF52540	UniParc:UPI00084272F4	InterPro:Vik1/Cik1_MT-bd	EnsemblPlantsGene:Zm00001d038797
EnsemblPlants:Zm00001d038797_P001	EnsemblPlants:Zm00001d038797_T001	:	:	:	:

Description

P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain

Coordinates

chr6:+:164581424..164588542

Molecular Weight (calculated)

95087.2 Da

IEP (calculated)

6.482

GRAVY (calculated)

-0.576

Length

841 amino acids

Sequence
(BLAST)

001: MRSVNGEVEG THDHEANRRG QLIEWMNALL PEFSLPPDSS DEELRELLSD GVVLCRVANT LIPGGSWDGY APSDQRLGNL NKFLSVIADM GLPGFSVKDL
101: DEVRVPLSVV THTRVVIYVQ TNRSLEYTSI CDFFPLFLVG SMSPVVECLL VLRDSVDPRL GDDIPPDVTR TPLRKQWGVP EMDKPQVHGA ALGKRSPAED
201: KRNGVADPKA HQKTSVFSGQ KFCDVFQLKH GSYSGPAAAK ISEMMHSNSL DNAPTQSLIS VVNGILDESI ERKKGEIPHR VVYLLRKVVQ EIERRLYIQA
301: EHIRSQNVIM KRREQKYCSK IKVLEMLVNG TNEENQMAIN RLQIVKNEKS KIEERRKLSE QDVHRLMREK EHSENIIANL KKDIEAMNRL HEQQLEQTER
401: KAKEMEEQLT TKVKEVEYLL LQSKKKVEEV ETASRLKSQL WDKKEDNFQS HMDNQQLIIK DIRILSRSCE NDMYALQMQW RNEISNLGSG LKCLVDAAEN
501: YHKVLAENQK LFNEVQELKG NIRVYCRVRP FLSGQDKKST TIDYMGENGE LLISNPFKQG KDGHRLFKFN KVFSPFASQA EVFSDIQPLI RSVLDGFNVC
601: IFAYGQTGSG KTYTMSGPST SKQDWGVNYR ALNDLFDISL SRRNAFSYEK SIHVPYRNSK LTQVLQSSLG GQAKTLMFVQ INPDVESYSE TISTLKFAER
701: VSGVELGAAR SNKEGKDIKE LLEQVASLKD TISRKDMEIE QLQVIKDKAK SPNLLLDRNG PGLTKITVNQ PSQLLSGERM LKSSDRVLSD PPDNRDSNHN
801: LTDTAPVSLD EAEYDGNASD DGLSGEAENY NSAAEMTAER L

Best Arabidopsis Sequence Match ( AT1G63640.1 )
(BLAST)

0001: MSSHLSQDAN MNGVYVRSDV SSMLSFDGSE SRESMDDSKK GHQSLVEWLN ETLPYLKLPW EASEDELRAC LRDGTVLCSL LNQLSPGSMR MGGSFEPASV
0101: KIERFLTAMD EMALPRFEVS DIEQGDMVPV LQSLKALKAS FSDGSYDKNS LAARRRWSLP EDHSDSRGDD RNFTDGFQSK EGSEIDMSDA KISDLLKSNS
0201: LRNAPTRSLF DMLDKLLDES MTKMNGHVSH AMASLLSALV QVIEQRISNQ ADNLKNQNIL FRVREEKYRS RIKVLESLAA GTTKENEIVT NCMEHIKLEK
0301: TRIEEKERSE EKDVVRLRKE KERSDAEIRQ LKQELKLVKE THENQCLELE AKAQKTRDEL EKKLKDAELH VVDSSRKVKE LEKLCQSKSQ RWEKKECIYQ
0401: NFIDNHSGAL QELSATSLSI KHEVVRTQRK YFEDLNYYGL KLKGVADAAK NYHVVLEENR RLYNEVQELK GNIRVYCRIR PFLPGQNSRQ TTIEYIGETG
0501: ELVVANPFKQ GKDTHRLFKF NKVFDQAATQ EEVFLDTRPL IRSILDGYNV CIFAYGQTGS GKTYTMSGPS ITSKEDWGVN YRALNDLFLL TQSRQNTVMY
0601: EVGVQMVEIY NEQVRDILSD GGSSRRLGIW NTALPNGLAV PDASMHCVRS TEDVLELMNI GLMNRTVGAT ALNERSSRSH CVLSVHVRGV DVETDSILRG
0701: SLHLVDLAGS ERVDRSEATG ERLKEAQHIN KSLSALGDVI FALAHKNPHV PYRNSKLTQV LQSSLGGQAK TLMFVQVNPD GDSYAETVST LKFAERVSGV
0801: ELGAAKSSKE GRDVRQLMEQ VSNLKDVIAK KDEELQNFQK VKGNNATSLK RGLSNLRLVG PTSPRRHSIG ASPNARRGKA SGLFGRGTSD VDNCSEYSSK
0901: HSDSGSQQSS DERKHQKDYH QPSKFAGAAK GIDFDDEDVE LVGLADADSE DRLSDISDSC LSMGTETDGS ISSAVELTLF PETAKPLELI ERPEARMTSE
1001: KLEKSVKMGK TEPKDRTNIP SKIPKQTLKP PGQTRPSRLS IATSSSSKAL TGAKRPTIST SSSAKPLNRR R

Arabidopsis Description

P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain [Source:TAIR;Acc:AT1G63640]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.