Factsheet for Zm00001d007712_P003

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG29090	Sorghum	cytosol	76.34	84.62
Os11t0672400-00	Rice	plasma membrane	52.13	64.39
TraesCS4A01G169700.2	Wheat	cytosol	59.84	64.08
TraesCS4D01G144800.1	Wheat	cytosol	59.66	63.76
TraesCS4B01G126400.1	Wheat	cytosol	59.47	63.63
HORVU4Hr1G032920.32	Barley	cytosol	58.84	63.19
Zm00001d023841_P008	Maize	cytosol	47.33	54.72
Zm00001d028830_P009	Maize	cytosol, plastid	26.56	51.95
VIT_14s0060g01570.t01	Wine grape	cytosol	42.61	46.21
KRH69263	Soybean	cytosol	41.43	45.43
VIT_07s0005g00940.t01	Wine grape	cytosol	41.8	44.98
PGSC0003DMT400018808	Potato	cytosol	40.89	44.88
KRH31841	Soybean	cytosol	41.16	44.86
PGSC0003DMT400063759	Potato	cytosol	41.16	44.82
Solyc06g009780.2.1	Tomato	nucleus	40.8	44.78
KRG96486	Soybean	cytosol	40.8	44.6
Solyc01g100120.2.1	Tomato	cytosol	40.89	44.43
Solyc09g075480.2.1	Tomato	nucleus	40.16	44.3
CDY53341	Canola	cytosol	36.45	43.7
AT2G47500.1	Thale cress	cytosol	38.89	43.64
KRH68226	Soybean	cytosol	40.62	43.54
CDY19745	Canola	cytosol	36.81	43.28
KRG96746	Soybean	cytosol	39.89	42.93
KRH68465	Soybean	cytosol	39.53	42.79
KRH33856	Soybean	cytosol	38.26	42.76
AT5G27000.1	Thale cress	cytosol	38.08	42.55
CDX80606	Canola	cytosol	38.17	42.4
CDX80111	Canola	cytosol	37.99	42.32
Zm00001d047677_P016	Maize	cytosol	39.08	42.21
CDY57719	Canola	cytosol	37.53	42.07
CDX88251	Canola	cytosol	35.99	41.83
Bra004451.1-P	Field mustard	cytosol	35.45	41.68
Bra036604.1-P	Field mustard	cytosol	29.65	41.55
Bra009929.1-P	Field mustard	cytosol	35.45	41.42
CDY31108	Canola	cytosol	35.27	39.9
CDY32155	Canola	cytosol	35.72	39.64
Bra030760.1-P	Field mustard	cytosol	33.82	39.1
AT1G09170.5	Thale cress	cytosol	35.9	37.86
CDY67329	Canola	cytosol	27.65	37.2
Zm00001d003368_P001	Maize	cytosol	30.19	31.5
Zm00001d039617_P006	Maize	cytosol	27.92	31.46
Zm00001d043504_P030	Maize	cytosol	27.47	30.98
Zm00001d012763_P002	Maize	cytosol	23.84	30.16
Zm00001d010790_P017	Maize	cytosol, endoplasmic reticulum, nucleus	27.38	29.24
Zm00001d038797_P001	Maize	cytosol	20.76	27.23
Zm00001d002186_P001	Maize	cytosol	15.5	22.01
Zm00001d009926_P001	Maize	cytosol	16.41	21.68
Zm00001d038131_P004	Maize	cytosol	16.14	21.52
Zm00001d016273_P001	Maize	cytosol	25.2	20.86
Zm00001d036987_P001	Maize	cytosol, plastid	19.58	20.57
Zm00001d041323_P003	Maize	nucleus	16.95	19.87
Zm00001d018624_P001	Maize	cytosol	14.87	19.83
Zm00001d031074_P002	Maize	nucleus	16.77	19.25
Zm00001d027337_P001	Maize	cytosol	18.59	18.4
Zm00001d001928_P006	Maize	cytosol, plastid	15.32	13.29
Zm00001d026548_P049	Maize	cytosol	15.41	13.24

Protein Annotations

Gene3D:1.10.418.10	MapMan:20.1.3.12	Gene3D:3.40.850.10	UniProt:A0A1D6F857	InterPro:CH-domain	InterPro:CH_dom_sf
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0007018	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	InterPro:IPR001715
InterPro:IPR001752	InterPro:IPR036872	InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf
ProteinID:ONM27393.1	InterPro:P-loop_NTPase	PFAM:PF00225	PFAM:PF00307	PFAM:PF16796	PRINTS:PR00380
PFscan:PS50021	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF438	SMART:SM00033	SMART:SM00129
SUPFAM:SSF47576	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0008436473	InterPro:Vik1/Cik1_MT-bd	EnsemblPlantsGene:Zm00001d007712
EnsemblPlants:Zm00001d007712_P003	EnsemblPlants:Zm00001d007712_T003	SEG:seg	:	:	:

Description

P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain

Coordinates

chr2:+:237946938..237954326

Molecular Weight (calculated)

120211.0 Da

IEP (calculated)

6.788

GRAVY (calculated)

-0.370

Length

1103 amino acids

Sequence
(BLAST)

0001: MPALKVLRFP LASPPDGPPS KTPPALSVSR APPPQYHFVR KNKGESSRKS SPPPASPPLL PVIAPPPERP SRGRVVGFGA GPGPGPDPPM ASTEQEAAVE
0101: AAAVVEEVTR QQGKGCGVAG GGDTVGSWRN IDIAWRKADE AAIRRYEAAN WLRRIVGVVC AKDLAEEPSE EEFRIGLRNG IILCNALNKI QPGAVPKVVE
0201: VPSDSTAPVD GTALCAYQYF ENVRNFLTGM QDLGLTTFEA SDLEKGGQGV RVVDCVLAMK SFCDAKHVGK RSPFKYGGIV KPLSGKYVIR KNNEPYMKVM
0301: MRSHSAELLR DGISLEQIGL DFSLEPTETT ATPDSIRMLV QTVLADKKPE EIPSVVESLL SKVINEYDCR IASQSEVVKD TMEQVKDTME QVKDTMDTND
0401: CNSVLRMDSP FDTNDTKSLS RVDSPQVEST TPSDLDKATE NIKMDEDEQN ASSLTEDVST LVPLPVPVPL SNDIVINIPK IVRNFDQEEK QIQDLKSNMS
0501: TVKSFMEQLK LLYSEDLKKL GDHLRIISHA ASGYRKVVEE NRKLYNQIQD LRGNIRVYCR VRPFHPGKEF PSSSVAGIED RTITVMVPSK HGKDGKKSFT
0601: FNSVFGPLAT QADVFTDMQP LVRSVLDGFN VCIFAYGQTG SGKTFTMSGP KILTEEGLGV NYRALNDLFG IQEQRKDTIC YEIAVQMMEI YNEQVRDLLQ
0701: TGGNKKYPFT LSLILILLLD ILTFFFLHML NIYLIYVGLL NAKKHWKFEI ILKTELQFQM QMWCHCLTVH VQGRDLTSGT VLRGCMHLVD LAGSERVDKS
0801: EVVGIGLKEA QHINKSLAAL GDVIAALAQK STHVPYRNSK LTQLLQDSLG GQAKTLMFIH IAPEPDAISE SISTLKFAER VSTIELGAAK SSKEGGGGGG
0901: GEARELKEQI ACLRAALARK DGDHESIRST QSSPDIYRMG TGNASPASRH PIEDGIIEND SALGDLAEHS QFGSSNSLPE LGPDATQDLA FYQRSNSEQQ
1001: WSWSGSVATE DSDDFEVATN CSLELDCVRP SSAPKASGLS NGGGTAVKKI QVKGSKGSDV RGVNPGKRSS PLQKKPSGPS PTLIKKGGGE GRKTPNGKTG
1101: TKK

Best Arabidopsis Sequence Match ( AT1G09170.2 )
(BLAST)

001: MATEQQDSQL CLATILEDFL KQRNIQVSVG VDSSSLKKAD ETFGGRDLPV DPSDLRRYEA ARWVRNTLGV VGGRDLPADP SEEDFRIALR SGILLCNVLN
101: RVKPGAVPKV VEAPNDPLVN QDGAALSAFQ YFENLRNFLV FVEEMGIPTF EVSDFEKGGK SARIVECVLA LKSYREWKQS GGSGTWRYIL NSKPTTFGIA
201: KQYKRKDSEV PVDAVTNSPS STPSSEQPLL DQSDSNTKND GTASSIDAIV RAVFSDMKQE DIPVIVEDML KSVMVEYERR LATQNELLLM SAGNRDKLGS
301: GDLGRTISGN EETLSDASYG EENVTEIVNN NMEASQDSNV EELENQDYEL YAISKEKTEK QQLIIERQQT HTEELKHDLK AVKAGLSLLQ MKYQQEFTSL
401: GKHLHGLTYA ATGYQRVLEE NRKLYNQVQD LKGSIRVYCR VRPFLPGQKS VLTTVDHLED STLSIATPSK YGKEGQKTFT FNKVFGPSAS QEAVFADTQP
501: LIRSVLDGYN VCIFAYGQTG SGKTFTMMGP NELTDETLGV NYRALSDLFH LSSVRKETFS YNISVQMLEI YNEQVRDLLA TNGQTSRLEI RNSTQDGINV
601: PEATLVPVST TSDVIHLMNI GQKNRAVSAT AMNDRSSRSH SCLTVHVQGK DLTSGVTLRG SMHLVDLAGS ERIDKSEVTG DRLKEAQHIN KSLSALGDVI
701: ASLSQKNNHI PYRNSKLTQL LQDALGGQAK TLMFIHISPE LEDLGETLST LKFAERVATV DLGAARVNKD TSEVKELKEQ IASLKLALAR KESGADQTQL
801: QRPLTPDKLL RKKSLGVSSS FSKSANSTRQ VQTKHKPSQI DDVNSIEVKG TRKLIHQTKQ IKLVNTFCSD YFMMCSEITC RVKVTLHLAL TYKD

Arabidopsis Description

P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain [Source:TAIR;Acc:AT1G09170]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.