Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G169700.2 | Wheat | cytosol | 97.0 | 97.18 |
| TraesCS4B01G126400.1 | Wheat | cytosol | 96.71 | 96.8 |
| HORVU4Hr1G032920.32 | Barley | cytosol | 93.41 | 93.87 |
| Os11t0672400-00 | Rice | plasma membrane | 65.41 | 75.59 |
| KXG29090 | Sorghum | cytosol | 69.96 | 72.56 |
| Zm00001d007712_P003 | Maize | plastid | 63.76 | 59.66 |
| TraesCS5D01G105200.1 | Wheat | cytosol | 57.07 | 58.78 |
| TraesCS4D01G188000.1 | Wheat | cytosol | 50.78 | 52.45 |
| VIT_14s0060g01570.t01 | Wine grape | cytosol | 50.19 | 50.93 |
| PGSC0003DMT400018808 | Potato | cytosol | 49.52 | 50.85 |
| Solyc06g009780.2.1 | Tomato | nucleus | 49.42 | 50.75 |
| KRH69263 | Soybean | cytosol | 49.32 | 50.6 |
| KRH31841 | Soybean | cytosol | 49.52 | 50.49 |
| VIT_07s0005g00940.t01 | Wine grape | cytosol | 50.0 | 50.34 |
| KRG96486 | Soybean | cytosol | 49.13 | 50.25 |
| Solyc09g075480.2.1 | Tomato | nucleus | 47.97 | 49.5 |
| CDY57719 | Canola | cytosol | 46.9 | 49.19 |
| Solyc01g100120.2.1 | Tomato | cytosol | 48.26 | 49.06 |
| AT2G47500.1 | Thale cress | cytosol | 46.71 | 49.03 |
| CDX80111 | Canola | cytosol | 47.0 | 48.99 |
| KRH68226 | Soybean | cytosol | 48.84 | 48.98 |
| Bra004451.1-P | Field mustard | cytosol | 44.48 | 48.93 |
| PGSC0003DMT400063759 | Potato | cytosol | 47.97 | 48.86 |
| CDY53341 | Canola | cytosol | 43.02 | 48.26 |
| KRH33856 | Soybean | cytosol | 45.93 | 48.02 |
| KRG96746 | Soybean | cytosol | 47.48 | 47.8 |
| CDY19745 | Canola | cytosol | 43.12 | 47.44 |
| KRH68465 | Soybean | cytosol | 46.8 | 47.4 |
| AT5G27000.1 | Thale cress | cytosol | 44.28 | 46.3 |
| CDX80606 | Canola | cytosol | 44.38 | 46.12 |
| CDX88251 | Canola | cytosol | 42.25 | 45.94 |
| Bra009929.1-P | Field mustard | cytosol | 41.76 | 45.66 |
| CDY67329 | Canola | cytosol | 36.24 | 45.61 |
| Bra036604.1-P | Field mustard | cytosol | 34.4 | 45.11 |
| CDY31108 | Canola | cytosol | 42.54 | 45.03 |
| Bra030760.1-P | Field mustard | cytosol | 41.28 | 44.65 |
| CDY32155 | Canola | cytosol | 42.73 | 44.37 |
| AT1G09170.5 | Thale cress | cytosol | 42.44 | 41.87 |
| TraesCS2D01G329700.1 | Wheat | cytosol | 37.89 | 37.67 |
| TraesCS3D01G275200.1 | Wheat | cytosol | 33.14 | 35.19 |
| TraesCS3D01G172000.1 | Wheat | cytosol | 32.46 | 34.15 |
| TraesCS1D01G343800.1 | Wheat | cytosol | 33.04 | 30.61 |
| TraesCS7D01G366700.2 | Wheat | cytosol | 33.72 | 28.59 |
| TraesCS6D01G177300.1 | Wheat | cytosol | 33.33 | 24.69 |
| TraesCS2D01G479900.1 | Wheat | cytosol, plastid | 18.41 | 24.2 |
| TraesCS1D01G248600.1 | Wheat | cytosol | 20.16 | 24.1 |
| TraesCS2D01G322800.2 | Wheat | cytosol | 17.73 | 23.7 |
| TraesCS5D01G040800.1 | Wheat | nucleus | 19.38 | 20.6 |
| TraesCS2D01G487700.1 | Wheat | cytosol | 18.02 | 14.54 |
Protein Annotations
| Gene3D:1.10.418.10 | MapMan:20.1.3.12 | Gene3D:3.40.850.10 | InterPro:CH-domain | InterPro:CH_dom_sf | ncoils:Coil |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003774 | GO:GO:0003777 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0007018 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016787 | InterPro:IPR001715 | InterPro:IPR001752 | InterPro:IPR036872 | InterPro:IPR036961 | InterPro:Kinesin-like_fam |
| InterPro:Kinesin_motor_dom | InterPro:Kinesin_motor_dom_sf | InterPro:P-loop_NTPase | PFAM:PF00225 | PFAM:PF00307 | PRINTS:PR00380 |
| PFscan:PS50021 | PFscan:PS50067 | PANTHER:PTHR24115 | PANTHER:PTHR24115:SF438 | SMART:SM00033 | SMART:SM00129 |
| SUPFAM:SSF47576 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS4D01G144800 | EnsemblPlants:TraesCS4D01G144800.1 | TIGR:cd01366 | SEG:seg |
Description
No Description!
Coordinates
chr4D:+:133473524..133479460
Molecular Weight (calculated)
111719.0 Da
IEP (calculated)
6.612
GRAVY (calculated)
-0.475
Length
1032 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAASPEREAV AATAIVEDVL RMHGEGLGGG GGVGEAVVMG RNIDMAWRKA EVAAVRRNEA ANWLRRTVGV VCAKNLAEEP SEEEFRVGLR NGIILCNAVN
0101: KIQPGTVPKV VEVHSVSTIP SDGSALCAYQ YFENVRNFLT GLQDLGLPTF EVSDLEKGGQ GVRVVDCVLA LKSFAETKKL GKQSLFKHGG IVKPSMSAKC
0201: SVRKNEPFMK AMTRSHSAEL LRDGVSPEQT LGLDCSLEPA ETITSDSIRM LVQTIISDKK PEEVPLLVES LLSKVIHEFE RRMANQNDLV KYTIDPNDSS
0301: SLSKTESSDT PQEMEATSTS DHGKMDEEDH ESVTNHVKTD EEDNSCVTNN VKMDDEDHNS VGSTGDVSAA GLVNGDSVAK EIQAKADIHF ELQKKQIQDM
0401: KSNICTVKSG IEQFKLQYSE DLAKLGNHLR TISHAASGYH KVLEENRKLY NQIQDLRGNI RVYCRVRPFL PGKVSSSSSV AGIEDRTITL MTSSKQGKDA
0501: RKSFTFNRVF GPLATQAEVF VDMQPLVRSV LDGYNVCIFA YGQTGSGKTF TMSGPKILTE EGLGVNYRAL NDLFDIQAQR RDTFCYEISV QMMEIYNEQV
0601: RDLLHSGPNK KLEIRNSSQN GIAVPDANRV PVASTSDVVD LMNLGQKNRA VCSTAMNDRS SRSHSCVTVH VQGRDLTSGT VLRGCMHLVD LAGSERVDKS
0701: EVVGDRLKEA QHINKSLAAL GDVIASLAQK NAHVPYRNSK LTQLLQDSLG GQAKTLMFVH IAPEPDAIGE SISTLKFADR VASVELGAAK TNKEGGEVKE
0801: LKEQIACLKA ALASKDGENE SIRSTHSSPD ILRDIRISHA PPASGHPGEE AGCLEVRSNG TPTRQTKPNF ELSDMLVESD PSSWLDGCNG DNTRLRSSNS
0901: LPELGPDATH DLALYQRSSP DQQWSRAGSV ATEDSDDGEF ETTCSSEQDS VRPASAPKAS VTANGGASVA KKAQTKSVKS TDIRGTNPAK RTSPLPKKAN
1001: GTAHIPIKNG KQSTLGGVDG KKTPNGKVST KK
0101: KIQPGTVPKV VEVHSVSTIP SDGSALCAYQ YFENVRNFLT GLQDLGLPTF EVSDLEKGGQ GVRVVDCVLA LKSFAETKKL GKQSLFKHGG IVKPSMSAKC
0201: SVRKNEPFMK AMTRSHSAEL LRDGVSPEQT LGLDCSLEPA ETITSDSIRM LVQTIISDKK PEEVPLLVES LLSKVIHEFE RRMANQNDLV KYTIDPNDSS
0301: SLSKTESSDT PQEMEATSTS DHGKMDEEDH ESVTNHVKTD EEDNSCVTNN VKMDDEDHNS VGSTGDVSAA GLVNGDSVAK EIQAKADIHF ELQKKQIQDM
0401: KSNICTVKSG IEQFKLQYSE DLAKLGNHLR TISHAASGYH KVLEENRKLY NQIQDLRGNI RVYCRVRPFL PGKVSSSSSV AGIEDRTITL MTSSKQGKDA
0501: RKSFTFNRVF GPLATQAEVF VDMQPLVRSV LDGYNVCIFA YGQTGSGKTF TMSGPKILTE EGLGVNYRAL NDLFDIQAQR RDTFCYEISV QMMEIYNEQV
0601: RDLLHSGPNK KLEIRNSSQN GIAVPDANRV PVASTSDVVD LMNLGQKNRA VCSTAMNDRS SRSHSCVTVH VQGRDLTSGT VLRGCMHLVD LAGSERVDKS
0701: EVVGDRLKEA QHINKSLAAL GDVIASLAQK NAHVPYRNSK LTQLLQDSLG GQAKTLMFVH IAPEPDAIGE SISTLKFADR VASVELGAAK TNKEGGEVKE
0801: LKEQIACLKA ALASKDGENE SIRSTHSSPD ILRDIRISHA PPASGHPGEE AGCLEVRSNG TPTRQTKPNF ELSDMLVESD PSSWLDGCNG DNTRLRSSNS
0901: LPELGPDATH DLALYQRSSP DQQWSRAGSV ATEDSDDGEF ETTCSSEQDS VRPASAPKAS VTANGGASVA KKAQTKSVKS TDIRGTNPAK RTSPLPKKAN
1001: GTAHIPIKNG KQSTLGGVDG KKTPNGKVST KK
001: MATEQQDSQL CLATILEDFL KQRNIQVSVG VDSSSLKKAD ETFGGRDLPV DPSDLRRYEA ARWVRNTLGV VGGRDLPADP SEEDFRIALR SGILLCNVLN
101: RVKPGAVPKV VEAPNDPLVN QDGAALSAFQ YFENLRNFLV FVEEMGIPTF EVSDFEKGGK SARIVECVLA LKSYREWKQS GGSGTWRYIL NSKPTTFGIA
201: KQYKRKDSEV PVDAVTNSPS STPSSEQPLL DQSDSNTKND GTASSIDAIV RAVFSDMKQE DIPVIVEDML KSVMVEYERR LATQNELLLM SAGNRDKLGS
301: GDLGRTISGN EETLSDASYG EENVTEIVNN NMEASQDSNV EELENQDYEL YAISKEKTEK QQLIIERQQT HTEELKHDLK AVKAGLSLLQ MKYQQEFTSL
401: GKHLHGLTYA ATGYQRVLEE NRKLYNQVQD LKGSIRVYCR VRPFLPGQKS VLTTVDHLED STLSIATPSK YGKEGQKTFT FNKVFGPSAS QEAVFADTQP
501: LIRSVLDGYN VCIFAYGQTG SGKTFTMMGP NELTDETLGV NYRALSDLFH LSSVRKETFS YNISVQMLEI YNEQVRDLLA TNGQTSRLEI RNSTQDGINV
601: PEATLVPVST TSDVIHLMNI GQKNRAVSAT AMNDRSSRSH SCLTVHVQGK DLTSGVTLRG SMHLVDLAGS ERIDKSEVTG DRLKEAQHIN KSLSALGDVI
701: ASLSQKNNHI PYRNSKLTQL LQDALGGQAK TLMFIHISPE LEDLGETLST LKFAERVATV DLGAARVNKD TSEVKELKEQ IASLKLALAR KESGADQTQL
801: QRPLTPDKLL RKKSLGVSSS FSKSANSTRQ VQTKHKPSQI DDVNSIE
101: RVKPGAVPKV VEAPNDPLVN QDGAALSAFQ YFENLRNFLV FVEEMGIPTF EVSDFEKGGK SARIVECVLA LKSYREWKQS GGSGTWRYIL NSKPTTFGIA
201: KQYKRKDSEV PVDAVTNSPS STPSSEQPLL DQSDSNTKND GTASSIDAIV RAVFSDMKQE DIPVIVEDML KSVMVEYERR LATQNELLLM SAGNRDKLGS
301: GDLGRTISGN EETLSDASYG EENVTEIVNN NMEASQDSNV EELENQDYEL YAISKEKTEK QQLIIERQQT HTEELKHDLK AVKAGLSLLQ MKYQQEFTSL
401: GKHLHGLTYA ATGYQRVLEE NRKLYNQVQD LKGSIRVYCR VRPFLPGQKS VLTTVDHLED STLSIATPSK YGKEGQKTFT FNKVFGPSAS QEAVFADTQP
501: LIRSVLDGYN VCIFAYGQTG SGKTFTMMGP NELTDETLGV NYRALSDLFH LSSVRKETFS YNISVQMLEI YNEQVRDLLA TNGQTSRLEI RNSTQDGINV
601: PEATLVPVST TSDVIHLMNI GQKNRAVSAT AMNDRSSRSH SCLTVHVQGK DLTSGVTLRG SMHLVDLAGS ERIDKSEVTG DRLKEAQHIN KSLSALGDVI
701: ASLSQKNNHI PYRNSKLTQL LQDALGGQAK TLMFIHISPE LEDLGETLST LKFAERVATV DLGAARVNKD TSEVKELKEQ IASLKLALAR KESGADQTQL
801: QRPLTPDKLL RKKSLGVSSS FSKSANSTRQ VQTKHKPSQI DDVNSIE
Arabidopsis Description
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain [Source:TAIR;Acc:AT1G09170]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.