Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G144800.1 | Wheat | cytosol | 97.18 | 97.0 |
| TraesCS4B01G126400.1 | Wheat | cytosol | 96.5 | 96.41 |
| HORVU4Hr1G032920.32 | Barley | cytosol | 92.62 | 92.89 |
| Os11t0672400-00 | Rice | plasma membrane | 65.15 | 75.14 |
| KXG29090 | Sorghum | cytosol | 70.1 | 72.56 |
| Zm00001d007712_P003 | Maize | plastid | 64.08 | 59.84 |
| TraesCS5A01G092900.1 | Wheat | cytosol | 57.57 | 59.06 |
| TraesCS4A01G117700.1 | Wheat | cytosol | 51.26 | 52.85 |
| Solyc06g009780.2.1 | Tomato | nucleus | 49.81 | 51.04 |
| VIT_14s0060g01570.t01 | Wine grape | cytosol | 50.39 | 51.03 |
| KRH69263 | Soybean | cytosol | 49.81 | 50.99 |
| PGSC0003DMT400018808 | Potato | cytosol | 49.71 | 50.95 |
| VIT_07s0005g00940.t01 | Wine grape | cytosol | 50.49 | 50.73 |
| KRH31841 | Soybean | cytosol | 49.81 | 50.69 |
| KRG96486 | Soybean | cytosol | 49.51 | 50.55 |
| Solyc09g075480.2.1 | Tomato | nucleus | 48.06 | 49.5 |
| CDY57719 | Canola | cytosol | 47.28 | 49.49 |
| Solyc01g100120.2.1 | Tomato | cytosol | 48.64 | 49.36 |
| CDX80111 | Canola | cytosol | 47.38 | 49.29 |
| KRH68226 | Soybean | cytosol | 49.22 | 49.27 |
| Bra004451.1-P | Field mustard | cytosol | 44.85 | 49.25 |
| PGSC0003DMT400063759 | Potato | cytosol | 48.35 | 49.16 |
| AT2G47500.1 | Thale cress | cytosol | 46.89 | 49.14 |
| CDY53341 | Canola | cytosol | 43.11 | 48.26 |
| CDY19745 | Canola | cytosol | 43.59 | 47.87 |
| KRH33856 | Soybean | cytosol | 45.83 | 47.82 |
| KRG96746 | Soybean | cytosol | 47.57 | 47.8 |
| KRH68465 | Soybean | cytosol | 47.09 | 47.6 |
| AT5G27000.1 | Thale cress | cytosol | 44.56 | 46.5 |
| CDX80606 | Canola | cytosol | 44.66 | 46.32 |
| CDX88251 | Canola | cytosol | 42.52 | 46.15 |
| Bra009929.1-P | Field mustard | cytosol | 42.04 | 45.87 |
| CDY67329 | Canola | cytosol | 36.5 | 45.85 |
| Bra036604.1-P | Field mustard | cytosol | 34.66 | 45.36 |
| CDY31108 | Canola | cytosol | 42.52 | 44.92 |
| Bra030760.1-P | Field mustard | cytosol | 41.26 | 44.55 |
| CDY32155 | Canola | cytosol | 42.72 | 44.27 |
| AT1G09170.5 | Thale cress | cytosol | 42.52 | 41.87 |
| TraesCS2A01G333200.1 | Wheat | cytosol | 37.96 | 37.74 |
| TraesCS3A01G275300.1 | Wheat | cytosol | 33.11 | 35.08 |
| TraesCS3A01G169800.2 | Wheat | cytosol | 32.72 | 34.35 |
| TraesCS1A01G341500.1 | Wheat | cytosol | 32.91 | 30.43 |
| TraesCS7A01G356000.1 | Wheat | cytosol | 34.17 | 28.83 |
| TraesCS6A01G188600.1 | Wheat | cytosol | 33.11 | 25.64 |
| TraesCS2A01G480500.1 | Wheat | cytosol, plastid | 18.54 | 24.33 |
| TraesCS2A01G344500.1 | Wheat | cytosol | 17.48 | 24.03 |
| TraesCS1A01G249100.1 | Wheat | cytosol | 19.81 | 23.92 |
| TraesCS5A01G489000.1 | Wheat | cytosol | 20.49 | 23.29 |
| TraesCS5A01G032500.1 | Wheat | nucleus | 19.42 | 20.62 |
| TraesCS5A01G556500.2 | Wheat | cytosol, mitochondrion | 22.52 | 19.88 |
| TraesCS2A01G487500.1 | Wheat | cytosol | 18.06 | 14.67 |
Protein Annotations
| Gene3D:1.10.418.10 | MapMan:20.1.3.12 | Gene3D:3.40.850.10 | InterPro:CH-domain | InterPro:CH_dom_sf | ncoils:Coil |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003774 | GO:GO:0003777 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0007018 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016787 | InterPro:IPR001715 | InterPro:IPR001752 | InterPro:IPR036872 | InterPro:IPR036961 | InterPro:Kinesin-like_fam |
| InterPro:Kinesin_motor_dom | InterPro:Kinesin_motor_dom_sf | InterPro:P-loop_NTPase | PFAM:PF00225 | PFAM:PF00307 | PRINTS:PR00380 |
| PFscan:PS50021 | PFscan:PS50067 | PANTHER:PTHR24115 | PANTHER:PTHR24115:SF438 | SMART:SM00033 | SMART:SM00129 |
| SUPFAM:SSF47576 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS4A01G169700 | EnsemblPlants:TraesCS4A01G169700.2 | TIGR:cd01366 | SEG:seg |
Description
No Description!
Coordinates
chr4A:-:428154166..428160201
Molecular Weight (calculated)
111902.0 Da
IEP (calculated)
6.765
GRAVY (calculated)
-0.460
Length
1030 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASPEREAVA ATAIVEDMLR MHGERLGGGG GVGEVLVMGR NIDMAWRKAE VAAVRRNEAA SWLRRTVGVV CAKNLAEEPS EEEFRVGLRN GIILCNAVNK
0101: IQPGTVPKVV EVHSVSTIPS DGSALCAYQY FENVRNFLTG LQDLGLPTFE VSDLEKGGQG VRVVDCVLAL KSFAETKQLG KQSLFKHGGI VKPSMSAKCS
0201: VRKNEPFMKA MTRSHSAELL RDGVSLEQTL GLDCSLEPAE TITSDSIRML VQTILSDKKP EEVPLLVESL LSKVIHEFER RMANQNVLVK YTIDPNDSSS
0301: VCKTESSDTP QEMEATSTSD HGKMDEEDHE SVTNHVKTDE EDNSCVTNNV KMDDEDHNSV GSTGDVSAVV LVNGDSVAKD IQARADIHFE LQKKQIQDMK
0401: SNLCTVKSGI EQFKLQYSED LAKLGNHLRT ISHAASGYHK VLEENRKLYN QIQDLRGNIR VYCRVRPFLP GKVSSSSCVA GIEDRTITLM TSSKQGKDAR
0501: KSFTFNRVFG PLATQAEIFV DMQPLVRSVL DGYNVCIFAY GQTGSGKTFT MSGPKILTEE GLGVNYRALN DLFDIQAQRR DTFCYEISVQ MMEIYNEQVR
0601: DLLHSGPNKK LEIRNSSQNG IAVPDANRVP VASTSDVVDL MNLDHKNRAV CSTAMNDRSS RSHSCVTVHV QGRDLTSGTV LRGCMHLVDL AGSERVDKSE
0701: VVGDRLKEAQ HINKSLAALG DVIASLAQKN AHVPYRNSKL TQLLQDSLGG QAKTLMFVHI APEPDAVGES ISTLKFAERV ASVELGAAKT NKEGGEVKEL
0801: KEQIACLKAA LASKDGENES IRSTHSSPDI LRDIRISHAS PASGHPREEA GCLENRSNGT PTRQTKPNFE LSDMLVSDPS SWLDGCNGDN TRLRSSNSLP
0901: ELGPDATHDL ALYQRSSPDQ QWSRAGSVAT EDSDDGEVET TCSSEQDSVR PASAPKASVT ANGGGSVAKK AQTKSVKSTD IRGINPAKRT SPLPKKANGT
1001: AHIPIKNGKQ STLGGVDGKK TPNGKVSTKK
0101: IQPGTVPKVV EVHSVSTIPS DGSALCAYQY FENVRNFLTG LQDLGLPTFE VSDLEKGGQG VRVVDCVLAL KSFAETKQLG KQSLFKHGGI VKPSMSAKCS
0201: VRKNEPFMKA MTRSHSAELL RDGVSLEQTL GLDCSLEPAE TITSDSIRML VQTILSDKKP EEVPLLVESL LSKVIHEFER RMANQNVLVK YTIDPNDSSS
0301: VCKTESSDTP QEMEATSTSD HGKMDEEDHE SVTNHVKTDE EDNSCVTNNV KMDDEDHNSV GSTGDVSAVV LVNGDSVAKD IQARADIHFE LQKKQIQDMK
0401: SNLCTVKSGI EQFKLQYSED LAKLGNHLRT ISHAASGYHK VLEENRKLYN QIQDLRGNIR VYCRVRPFLP GKVSSSSCVA GIEDRTITLM TSSKQGKDAR
0501: KSFTFNRVFG PLATQAEIFV DMQPLVRSVL DGYNVCIFAY GQTGSGKTFT MSGPKILTEE GLGVNYRALN DLFDIQAQRR DTFCYEISVQ MMEIYNEQVR
0601: DLLHSGPNKK LEIRNSSQNG IAVPDANRVP VASTSDVVDL MNLDHKNRAV CSTAMNDRSS RSHSCVTVHV QGRDLTSGTV LRGCMHLVDL AGSERVDKSE
0701: VVGDRLKEAQ HINKSLAALG DVIASLAQKN AHVPYRNSKL TQLLQDSLGG QAKTLMFVHI APEPDAVGES ISTLKFAERV ASVELGAAKT NKEGGEVKEL
0801: KEQIACLKAA LASKDGENES IRSTHSSPDI LRDIRISHAS PASGHPREEA GCLENRSNGT PTRQTKPNFE LSDMLVSDPS SWLDGCNGDN TRLRSSNSLP
0901: ELGPDATHDL ALYQRSSPDQ QWSRAGSVAT EDSDDGEVET TCSSEQDSVR PASAPKASVT ANGGGSVAKK AQTKSVKSTD IRGINPAKRT SPLPKKANGT
1001: AHIPIKNGKQ STLGGVDGKK TPNGKVSTKK
001: MATEQQDSQL CLATILEDFL KQRNIQVSVG VDSSSLKKAD ETFGGRDLPV DPSDLRRYEA ARWVRNTLGV VGGRDLPADP SEEDFRIALR SGILLCNVLN
101: RVKPGAVPKV VEAPNDPLVN QDGAALSAFQ YFENLRNFLV FVEEMGIPTF EVSDFEKGGK SARIVECVLA LKSYREWKQS GGSGTWRYIL NSKPTTFGIA
201: KQYKRKDSEV PVDAVTNSPS STPSSEQPLL DQSDSNTKND GTASSIDAIV RAVFSDMKQE DIPVIVEDML KSVMVEYERR LATQNELLLM SAGNRDKLGS
301: GDLGRTISGN EETLSDASYG EENVTEIVNN NMEASQDSNV EELENQDYEL YAISKEKTEK QQLIIERQQT HTEELKHDLK AVKAGLSLLQ MKYQQEFTSL
401: GKHLHGLTYA ATGYQRVLEE NRKLYNQVQD LKGSIRVYCR VRPFLPGQKS VLTTVDHLED STLSIATPSK YGKEGQKTFT FNKVFGPSAS QEAVFADTQP
501: LIRSVLDGYN VCIFAYGQTG SGKTFTMMGP NELTDETLGV NYRALSDLFH LSSVRKETFS YNISVQMLEI YNEQVRDLLA TNGQTSRLEI RNSTQDGINV
601: PEATLVPVST TSDVIHLMNI GQKNRAVSAT AMNDRSSRSH SCLTVHVQGK DLTSGVTLRG SMHLVDLAGS ERIDKSEVTG DRLKEAQHIN KSLSALGDVI
701: ASLSQKNNHI PYRNSKLTQL LQDALGGQAK TLMFIHISPE LEDLGETLST LKFAERVATV DLGAARVNKD TSEVKELKEQ IASLKLALAR KESGADQTQL
801: QRPLTPDKLL RKKSLGVSSS FSKSANSTRQ VQTKHKPSQI DDVNSIE
101: RVKPGAVPKV VEAPNDPLVN QDGAALSAFQ YFENLRNFLV FVEEMGIPTF EVSDFEKGGK SARIVECVLA LKSYREWKQS GGSGTWRYIL NSKPTTFGIA
201: KQYKRKDSEV PVDAVTNSPS STPSSEQPLL DQSDSNTKND GTASSIDAIV RAVFSDMKQE DIPVIVEDML KSVMVEYERR LATQNELLLM SAGNRDKLGS
301: GDLGRTISGN EETLSDASYG EENVTEIVNN NMEASQDSNV EELENQDYEL YAISKEKTEK QQLIIERQQT HTEELKHDLK AVKAGLSLLQ MKYQQEFTSL
401: GKHLHGLTYA ATGYQRVLEE NRKLYNQVQD LKGSIRVYCR VRPFLPGQKS VLTTVDHLED STLSIATPSK YGKEGQKTFT FNKVFGPSAS QEAVFADTQP
501: LIRSVLDGYN VCIFAYGQTG SGKTFTMMGP NELTDETLGV NYRALSDLFH LSSVRKETFS YNISVQMLEI YNEQVRDLLA TNGQTSRLEI RNSTQDGINV
601: PEATLVPVST TSDVIHLMNI GQKNRAVSAT AMNDRSSRSH SCLTVHVQGK DLTSGVTLRG SMHLVDLAGS ERIDKSEVTG DRLKEAQHIN KSLSALGDVI
701: ASLSQKNNHI PYRNSKLTQL LQDALGGQAK TLMFIHISPE LEDLGETLST LKFAERVATV DLGAARVNKD TSEVKELKEQ IASLKLALAR KESGADQTQL
801: QRPLTPDKLL RKKSLGVSSS FSKSANSTRQ VQTKHKPSQI DDVNSIE
Arabidopsis Description
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain [Source:TAIR;Acc:AT1G09170]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.