Factsheet for TraesCS5D01G105200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G099000.1	Wheat	cytosol	96.21	96.21
TraesCS5A01G092900.1	Wheat	cytosol	95.21	95.02
HORVU5Hr1G024390.9	Barley	cytosol, plastid	92.61	87.46
Os12t0547500-01	Rice	cytosol	69.56	73.06
KXG23658	Sorghum	cytosol	69.16	72.79
Zm00001d023841_P008	Maize	cytosol	68.16	71.59
TraesCS4D01G144800.1	Wheat	cytosol	58.78	57.07
TraesCS4D01G188000.1	Wheat	cytosol	51.9	52.05
KRH69263	Soybean	cytosol	52.2	51.99
KRH31841	Soybean	cytosol	52.2	51.68
KRG96486	Soybean	cytosol	51.6	51.24
VIT_07s0005g00940.t01	Wine grape	cytosol	52.1	50.93
KRH68226	Soybean	cytosol	51.5	50.15
VIT_14s0060g01570.t01	Wine grape	cytosol	50.7	49.95
Solyc01g100120.2.1	Tomato	cytosol	50.6	49.95
PGSC0003DMT400063759	Potato	cytosol	50.1	49.56
Solyc09g075480.2.1	Tomato	nucleus	49.4	49.5
AT2G47500.1	Thale cress	cytosol	48.4	49.34
Solyc06g009780.2.1	Tomato	nucleus	49.4	49.25
PGSC0003DMT400018808	Potato	cytosol	49.3	49.15
Bra004451.1-P	Field mustard	cytosol	45.61	48.72
CDX80111	Canola	cytosol	48.1	48.69
CDY57719	Canola	cytosol	47.7	48.58
CDY53341	Canola	cytosol	44.31	48.26
CDY19745	Canola	cytosol	44.71	47.76
AT5G27000.1	Thale cress	cytosol	46.71	47.42
CDX80606	Canola	cytosol	46.61	47.03
KRH33856	Soybean	cytosol	46.21	46.91
CDX88251	Canola	cytosol	44.11	46.58
Bra009929.1-P	Field mustard	cytosol	43.71	46.4
KRG96746	Soybean	cytosol	47.41	46.34
KRH68465	Soybean	cytosol	47.11	46.32
Bra036604.1-P	Field mustard	cytosol	35.83	45.62
CDY67329	Canola	cytosol	36.93	45.12
CDY32155	Canola	cytosol	44.71	45.07
CDY31108	Canola	cytosol	43.81	45.03
Bra030760.1-P	Field mustard	cytosol	42.61	44.76
AT1G09170.5	Thale cress	cytosol	44.71	42.83
TraesCS2D01G329700.1	Wheat	cytosol	38.62	37.28
TraesCS3D01G275200.1	Wheat	cytosol	34.33	35.39
TraesCS3D01G172000.1	Wheat	cytosol	33.13	33.84
TraesCS1D01G343800.1	Wheat	cytosol	34.43	30.97
TraesCS7D01G366700.2	Wheat	cytosol	34.83	28.68
TraesCS2D01G322800.2	Wheat	cytosol	18.96	24.61
TraesCS6D01G177300.1	Wheat	cytosol	33.83	24.34
TraesCS1D01G248600.1	Wheat	cytosol	20.96	24.33
TraesCS2D01G479900.1	Wheat	cytosol, plastid	18.46	23.57
TraesCS5D01G040800.1	Wheat	nucleus	20.26	20.91
TraesCS2D01G487700.1	Wheat	cytosol	18.66	14.62

Protein Annotations

Gene3D:1.10.418.10	MapMan:20.1.3.12	Gene3D:3.40.850.10	InterPro:CH-domain	InterPro:CH_dom_sf	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003779	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0006810	GO:GO:0007018	GO:GO:0007097	GO:GO:0008017	GO:GO:0008150
GO:GO:0008569	GO:GO:0009987	GO:GO:0015629	GO:GO:0015630	GO:GO:0016787	GO:GO:0016887
GO:GO:0031534	GO:GO:0043621	GO:GO:0051647	InterPro:IPR001715	InterPro:IPR001752	InterPro:IPR036872
InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225
PFAM:PF00307	PRINTS:PR00380	PFscan:PS50021	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF438
SMART:SM00033	SMART:SM00129	SUPFAM:SSF47576	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS5D01G105200	EnsemblPlants:TraesCS5D01G105200.1
TIGR:cd01366	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:119004898..119010591

Molecular Weight (calculated)

110111.0 Da

IEP (calculated)

8.834

GRAVY (calculated)

-0.489

Length

1002 amino acids

Sequence
(BLAST)

0001: MVATATVREL APAVAEGAPR NHGTVKDIDV AARRAQEAAN RRYDAASWLR RTVGIVCARD LPEEPSEEEF RLGLRNGIVL CNALNKVQPG AIPKVVEARA
0101: DTVIPADGSA LCAYQYFENL RNFLVSVQDI GLPTFELSDL EKGGKGVRVV DCILALKSFS ESKTTGRQTP CNYGSITKPS TSGKHFILKN SGAFMNKLMR
0201: SHTTEPIQKV LIAKQSIETD CCLESTEMAN LESLNMLVRT LLLDKKPEEV PLIVESLLIK VIQEYECRAA NQHLVNCIGD LKGTDLFSRP EKPLPEKTST
0301: STRVKMGEEE PNLLKVTEEV SSVVRNDDCV AEQFQPGTKI SIELQQKHIQ ELRNSLSSVK SGMEQLRIQY SEDFTKIGRQ LYILSNAASG YHKVLEDNRK
0401: LYNQIQDLKG NIRVYCRVRP FLPGQANSSS SVAGMEERTI TIITPTKYGK DGSKSFTFNK VSAPAATQEE VFSDMQPLIR SVLDGFNVCI FAYGQTGSGK
0501: TYTMSGPNVL SEKSVGVNYR ALNDLFNLQA QRKGTINYEI SVQMIEIYNE QVRDLLQDSG NRKLEIRNTS QKGLAVPDAS IVPVTSTSDV AELMNQGQKN
0601: RVVGSTAIND RSSRSHSCLT VHVQGHDLTS GTILRACMHL VDLAGSERVD KSEVVGDRLK EALYINKSLS ALGDVIASLA QKNSHVPYRN SKLTQLLQDS
0701: LGGQAKTLMF VHISPEPDVV NETISTLKFA ERVASVELGA AKANKEGGEV RELKEQIAWL KAALVKKEGE PENIQSTQSS PNIYGINKGN ATPVFRKNRQ
0801: PMEDVGNLEV RNNATPTQKA LKFDIPGSGI LVEHNSPNSV KNCWVDNAAV GDNQFENSNS VREQEPNLTT HTLLPNLFYQ RYTPGPQRGR VESIPSQESD
0901: EFNGVTNSCS SDQDMVMSSS GRKVVGITNG GVSNKKKPRA KNDNNMTTRS TNPTCKSPPQ SQKRLQTPVR SSVQKTPTKN GKQLLSGTDG RRTPSGKTNT
1001: VK

Best Arabidopsis Sequence Match ( AT1G09170.4 )
(BLAST)

001: MATEQQDSQL CLATILEDFL KQRNIQVSVG VDSSSLKKAD ETFGGRDLPV DPSDLRRYEA ARWVRNTLGV VGGRDLPADP SEEDFRIALR SGILLCNVLN
101: RVKPGAVPKV VEAPNDPLVN QDGAALSAFQ YFENLRNFLV FVEEMGIPTF EVSDFEKGGK SARIVECVLA LKSYREWKQS GGSGTWRYIL NSKPTTFGIA
201: KQYKRKDSEV PVDAVTNSPS STPSSEQPLL DQSDSNTKND GTASSIDAIV RAVFSDMKQE DIPVIVEDML KSVMVEYERR LATQNELLLM SAGNRDKLGS
301: GDLGRTISGN EETLSDASYG EENVTEIVNN NMEASQDSNV EELENQDYEL YAISKEKTEK QQLIIERQQT HTEELKHDLK AVKAGLSLLQ MKYQQEFTSL
401: GKHLHGLTYA ATGYQRVLEE NRKLYNQVQD LKGSIRVYCR VRPFLPGQKS VLTTVDHLED STLSIATPSK YGKEGQKTFT FNKVFGPSAS QEAVFADTQP
501: LIRSVLDGYN VCIFAYGQTG SGKTFTMMGP NELTDETLGV NYRALSDLFH LSSVRKETFS YNISVQMLEI YNEQVRDLLA TNGQTSRLEI RNSTQDGINV
601: PEATLVPVST TSDVIHLMNI GQKNRAVSAT AMNDRSSRSH SCLTVHVQGK DLTSGVTLRG SMHLVDLAGS ERIDKSEVTG DRLKEAQHIN KSLSALGDVI
701: ASLSQKNNHI PYRNSKLTQL LQDALGGQAK TLMFIHISPE LEDLGETLST LKFAERVATV DLGAARVNKD TSEVKELKEQ IASLKLALAR KESGADQTQL
801: QRPLTPDKLL RKKSLGVSSS FSKSANSTRQ VQTKHKPSQI DDVNSIE

Arabidopsis Description

P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain [Source:TAIR;Acc:AT1G09170]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.