Factsheet for Solyc06g069130.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

nucleus: 25464976

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400074040	Potato	cytosol	21.85	73.31
VIT_17s0000g03700.t01	Wine grape	cytosol	57.0	56.1
GSMUA_Achr1P02560_001	Banana	cytosol	34.34	55.81
Solyc12g036810.1.1	Tomato	extracellular	53.88	55.56
Os02t0229600-00	Rice	plasma membrane	29.31	52.06
CDY19209	Canola	plastid	48.54	51.66
HORVU3Hr1G070900.4	Barley	cytosol	50.65	51.59
TraesCS3D01G275200.1	Wheat	cytosol	50.45	51.54
TraesCS3A01G275300.1	Wheat	cytosol	50.35	51.44
TraesCS3B01G309000.1	Wheat	cytosol	50.35	51.44
Os01t0744000-01	Rice	cytosol	50.15	51.29
OQU78322	Sorghum	cytosol	49.55	51.09
OQU87522	Sorghum	cytosol	48.24	50.26
KRH39191	Soybean	cytosol	46.22	49.78
Os05t0521300-04	Rice	cytosol	50.55	49.6
Zm00001d012763_P002	Maize	cytosol	43.4	49.43
GSMUA_AchrUn_...	Banana	cytosol	50.96	48.61
Zm00001d043504_P030	Maize	cytosol	47.83	48.57
GSMUA_Achr4P25620_001	Banana	cytosol	53.78	48.55
CDX73023	Canola	cytosol, plastid	43.4	48.16
CDY11085	Canola	cytosol, plastid	48.74	47.83
CDX68208	Canola	cytosol, plastid	48.74	47.83
Bra003825.1-P	Field mustard	cytosol, plastid	48.74	47.73
AT1G73860.1	Thale cress	cytosol, plastid	48.84	47.32
CDX96493	Canola	cytosol, plastid	44.41	46.82
Zm00001d038797_P001	Maize	cytosol	38.57	45.54
Zm00001d010790_P017	Maize	cytosol, endoplasmic reticulum, nucleus	47.13	45.3
CDY26163	Canola	plastid	48.74	44.49
TraesCS1B01G354200.2	Wheat	cytosol	49.04	43.72
TraesCS1A01G341500.1	Wheat	cytosol	49.04	43.72
TraesCS1D01G343800.1	Wheat	cytosol	48.74	43.45
KRH60336	Soybean	cytosol	54.18	43.42
Bra025908.1-P	Field mustard	cytosol, plastid	46.42	42.8
KRH41631	Soybean	cytosol	45.32	42.69
AT1G18410.4	Thale cress	cytosol	49.14	42.32
Bra015957.1-P	Field mustard	cytosol, plastid	34.94	41.51
GSMUA_Achr7P08590_001	Banana	cytosol	51.06	41.32
HORVU7Hr1G088620.8	Barley	cytosol	46.53	40.07
TraesCS7D01G366700.2	Wheat	cytosol	48.44	39.52
KXG20162	Sorghum	cytosol	47.94	39.37
TraesCS7B01G271700.2	Wheat	cytosol	48.24	39.36
TraesCS7A01G356000.1	Wheat	cytosol	47.94	38.98
Os06t0554700-01	Rice	cytosol	18.33	38.97
TraesCS6A01G188600.1	Wheat	cytosol	46.32	34.59
Solyc09g075480.2.1	Tomato	nucleus	34.64	34.4
Solyc06g009780.2.1	Tomato	nucleus	34.14	33.73
TraesCS6B01G215900.1	Wheat	cytosol	46.42	33.12
TraesCS6D01G177300.1	Wheat	cytosol	46.32	33.02
HORVU0Hr1G015810.3	Barley	cytosol	45.62	32.95
Zm00001d016273_P001	Maize	cytosol	44.01	32.78
Solyc01g100120.2.1	Tomato	cytosol	33.23	32.51
KXG29848	Sorghum	cytosol	46.93	32.29
Zm00001d036987_P001	Maize	cytosol, plastid	34.04	32.19
HORVU1Hr1G075920.5	Barley	cytosol	38.07	32.01
Solyc12g005250.1.1	Tomato	cytosol	19.94	28.41
Solyc07g065880.2.1	Tomato	plastid	34.34	26.94
Solyc07g064030.2.1	Tomato	cytosol, plastid	20.75	25.75
Solyc04g016080.1.1	Tomato	nucleus	31.12	25.1
Solyc12g011290.1.1	Tomato	nucleus	23.57	20.14
Solyc11g010920.1.1	Tomato	cytosol	23.06	20.07
Solyc02g068340.2.1	Tomato	nucleus	19.84	15.57

Protein Annotations

Gene3D:1.10.418.10	MapMan:20.1.3.12	Gene3D:3.40.850.10	InterPro:CH-domain	InterPro:CH_dom_sf	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0005871	GO:GO:0005874	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016787	GO:GO:0016887	InterPro:IPR001715	InterPro:IPR001752	InterPro:IPR036872	InterPro:IPR036961
UniProt:K4C886	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase
PFAM:PF00225	PFAM:PF00307	PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50021	PFscan:PS50067
PANTHER:PTHR24115	PANTHER:PTHR24115:SF716	SMART:SM00033	SMART:SM00129	SUPFAM:SSF47576	SUPFAM:SSF52540
EnsemblPlantsGene:Solyc06g069130.2	EnsemblPlants:Solyc06g069130.2.1	UniParc:UPI0002766786	SEG:seg	:	:

Description

Kinesin-like protein [Source:UniProtKB/TrEMBL;Acc:K4C886]

Coordinates

chr6:-:42907500..42914283

Molecular Weight (calculated)

110987.0 Da

IEP (calculated)

8.870

GRAVY (calculated)

-0.478

Length

993 amino acids

Sequence
(BLAST)

001: MDSILDRVAK DCGRRNSSIP STSGDIFEPS SSSNAKLRAT LVVWINGLLP SLSLPVNASD EELRAYLVDG TILCQLLNKL KPGFIPEFGG SGLSSSLGSE
101: NVKRFLSAMD KMGLPRFQAS DLEKGSMKIV LECLLTLRAE FMPDVGGYGS TTPLSRKSGA DVAHRQELSS THSSPSSTEG RRKIGSDSKF QRALRSPVMA
201: EPSAALLHHV GHKFHEVFQL KQGGYADLPP SKISEMMKSN SLDIAPTQSL LSVVNEILDE SIERKNGEIP HRVACLLRKV VQEIERRIST QAEHLRTQNN
301: LFKTREEKYQ SRIRVLEALA TGTSEETQIV MNQLQQIKSV KIKMDAEKRN EDQDVVRLMK EKDDHSQEIA ALKQELETAK KAHEERCLEM EEEARTTQQK
401: LEERLKDVEI LLKESQSRAK EIETFSESKS LKWSKKENVY QIFTEFQLGA LRELKFASQS IKQEVVKTQR SYAEEFNQLG VKFRALDHAA ANYSVVLAEN
501: RKLHNELQEL KGNIRVYCRI RPFLRGQKEK QTVIEYIGEN GELVVVNPSK QGKEGRRSFK FNMVYSPASV QAQVYSDIQP LVQSVLDGYN VCIFAYGQTG
601: SGKTYTMTGP DGASEEDWGV NYRALNDLFR ISQMRESTFK YEIKVQMMEI YNEQVRDLLS SDDRYYVCNI YHASSTVFLD LHTLGILSTS QANGLAVPEA
701: SMFPVNGTAD VLDLMNTGLR NRAKGSTAMN ERSSRSHSIV TIHVQGKDIK SGSTMHSSLH LVDLAGSERV DRSEVTGDRL KEAQHINKSL SALGDVISAL
801: AQKNAHIPYR NSKLTQVLQA SLGGQAKTLM FVQLNPEIGS YSETMSTLKF AERASGVELG AARSSKDGRD IRELMEQVAS LKDTIAKKDE EIEQLQLLKV
901: QKNVSPVANG EKRSPSSFSD KLMNVLKAPI LSLKDTNDQR TQINTKLHIR LLDLHKNQRG ILQKPQTVYG SQSVQPICWL NLPKVAVGGS NMM

Best Arabidopsis Sequence Match ( AT1G63640.4 )
(BLAST)

0001: MSSHLSQDAN MNGVYVRSDV SSMLSFDGSE SRESMDDSKK GHQSLVEWLN ETLPYLKLPW EASEDELRAC LRDGTVLCSL LNQLSPGSMR MGGSFEPASV
0101: KIERFLTAMD EMALPRFEVS DIEQGDMVPV LQSLKALKAS FSDGSYDKNS LAARRRWSLP EDHSDSRGDD RNFTDGFQSK EGSEIDMSDA KISDLLKSNS
0201: LRNAPTRSLF DMLDKLLDES MTKMNGHVSH AMASLLSALV QVIEQRISNQ ADNLKNQNIL FRVREEKYRS RIKVLESLAA GTTKENEIVT NCMEHIKLEK
0301: TRIEEKERSE EKDVVRLRKE KERSDAEIRQ LKQELKLVKE THENQCLELE AKAQKTRDEL EKKLKDAELH VVDSSRKVKE LEKLCQSKSQ RWEKKECIYQ
0401: NFIDNHSGAL QELSATSLSI KHEVVRTQRK YFEDLNYYGL KLKGVADAAK NYHVVLEENR RLYNEVQELK GNIRVYCRIR PFLPGQNSRQ TTIEYIGETG
0501: ELVVANPFKQ GKDTHRLFKF NKVFDQAATQ EEVFLDTRPL IRSILDGYNV CIFAYGQTGS GKTYTMSGPS ITSKEDWGVN YRALNDLFLL TQSRQNTVMY
0601: EVGVQMVEIY NEQVRDILSD GGSSRRLGIW NTALPNGLAV PDASMHCVRS TEDVLELMNI GLMNRTVGAT ALNERSSRSH CVLSVHVRGV DVETDSILRG
0701: SLHLVDLAGS ERVDRSEATG ERLKEAQHIN KSLSALGDVI FALAHKNPHV PYRNSKLTQV LQSSLGGQAK TLMFVQVNPD GDSYAETVST LKFAERVSGV
0801: ELGAAKSSKE GRDVRQLMEQ VSNLKDVIAK KDEELQNFQK VKGNNATSLK RGLSNLRLVG PTSPRRHSIG ASPNARRGKA SGLFGRGTSD VDNCSEYSSK
0901: HSDSGSQQSS DERKHQKDYH QPSKFAGAAK GIDFDDEDVE LVGLADADSE DRLSDISDSC LSMGTETDGS ISSAVELTLF PETAKPLELI ERPEARMTSE
1001: KLEKSVKMGK TEPKDRTNIP SKIPKQTLKP PGQTRPSRLS IATSSSSKAL TGAKRPTIST SSSAKPLNRR R

Arabidopsis Description

P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain [Source:TAIR;Acc:AT1G63640]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.