Factsheet for Solyc12g036810.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 4
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g069130.2.1	Tomato	cytosol, nucleus	55.56	53.88
VIT_17s0000g03700.t01	Wine grape	cytosol	42.58	40.63
KRH39191	Soybean	cytosol	38.11	39.8
CDX73023	Canola	cytosol, plastid	34.68	37.32
TraesCS3B01G309000.1	Wheat	cytosol	36.97	36.63
TraesCS3D01G275200.1	Wheat	cytosol	36.97	36.63
CDX96493	Canola	cytosol, plastid	35.83	36.62
HORVU3Hr1G070900.4	Barley	cytosol	37.07	36.62
TraesCS3A01G275300.1	Wheat	cytosol	36.86	36.52
OQU78322	Sorghum	cytosol	36.45	36.45
Os01t0744000-01	Rice	cytosol	36.03	35.74
GSMUA_Achr4P25620_001	Banana	cytosol	40.71	35.64
Zm00001d038797_P001	Maize	cytosol	31.05	35.55
GSMUA_AchrUn_...	Banana	cytosol	38.21	35.35
KRH60336	Soybean	cytosol	45.17	35.11
CDY19209	Canola	plastid	33.96	35.05
OQU87522	Sorghum	cytosol	34.48	34.84
Os05t0521300-04	Rice	cytosol	36.55	34.78
GSMUA_Achr1P02560_001	Banana	cytosol	21.91	34.53
Zm00001d043504_P030	Maize	cytosol	34.79	34.25
CDX68208	Canola	cytosol, plastid	35.83	34.09
CDY11085	Canola	cytosol, plastid	35.62	33.89
Zm00001d012763_P002	Maize	cytosol	30.43	33.6
Bra003825.1-P	Field mustard	cytosol, plastid	35.31	33.53
AT1G73860.1	Thale cress	cytosol, plastid	35.62	33.46
KRH41631	Soybean	cytosol	35.41	32.35
Zm00001d010790_P017	Maize	cytosol, endoplasmic reticulum, nucleus	34.37	32.04
Os02t0229600-00	Rice	plasma membrane	18.38	31.66
TraesCS1A01G341500.1	Wheat	cytosol	36.24	31.33
GSMUA_Achr7P08590_001	Banana	cytosol	39.77	31.21
TraesCS1D01G343800.1	Wheat	cytosol	35.83	30.97
TraesCS1B01G354200.2	Wheat	cytosol	35.72	30.88
CDY26163	Canola	plastid	34.48	30.51
KXG20162	Sorghum	cytosol	38.11	30.36
HORVU7Hr1G088620.8	Barley	cytosol	36.34	30.36
TraesCS7B01G271700.2	Wheat	cytosol	38.11	30.16
TraesCS7D01G366700.2	Wheat	cytosol	38.01	30.07
TraesCS7A01G356000.1	Wheat	cytosol	37.9	29.89
AT1G18410.4	Thale cress	cytosol	35.72	29.84
Bra025908.1-P	Field mustard	cytosol, plastid	32.09	28.69
Zm00001d036987_P001	Maize	cytosol, plastid	29.91	27.43
TraesCS6A01G188600.1	Wheat	cytosol	37.38	27.07
Bra015957.1-P	Field mustard	cytosol, plastid	22.85	26.32
TraesCS6B01G215900.1	Wheat	cytosol	37.38	25.86
TraesCS6D01G177300.1	Wheat	cytosol	37.38	25.84
HORVU0Hr1G015810.3	Barley	cytosol	36.76	25.75
KXG29848	Sorghum	cytosol	38.21	25.5
Zm00001d016273_P001	Maize	cytosol	34.48	24.91
Solyc06g009780.2.1	Tomato	nucleus	24.61	23.58
Solyc01g100120.2.1	Tomato	cytosol	24.82	23.55
Solyc09g075480.2.1	Tomato	nucleus	23.78	22.9
HORVU1Hr1G075920.5	Barley	cytosol	25.55	20.83
PGSC0003DMT400059487	Potato	cytosol	3.63	19.34
Solyc12g005250.1.1	Tomato	cytosol	13.81	19.08
Solyc07g065880.2.1	Tomato	plastid	23.68	18.01
Solyc07g064030.2.1	Tomato	cytosol, plastid	14.85	17.88
Solyc04g016080.1.1	Tomato	nucleus	20.98	16.41
Os06t0554700-01	Rice	cytosol	7.79	16.06
Solyc11g010920.1.1	Tomato	cytosol	14.95	12.62
Solyc12g011290.1.1	Tomato	nucleus	15.16	12.56
Solyc02g068340.2.1	Tomato	nucleus	13.91	10.59

Protein Annotations

Gene3D:1.10.418.10	Gene3D:3.40.850.10	MapMan:35.1	InterPro:CH-domain	InterPro:CH_dom_sf	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016787	InterPro:IPR001715	InterPro:IPR001752	InterPro:IPR036872	InterPro:IPR036961	UniProt:K4DED5
InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PFAM:PF00307
PRINTS:PR00380	PFscan:PS50021	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF716	SMART:SM00033
SMART:SM00129	SUPFAM:SSF47576	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc12g036810.1	EnsemblPlants:Solyc12g036810.1.1	UniParc:UPI000276A1C4
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr12:-:50422351..50427616

Molecular Weight (calculated)

110017.0 Da

IEP (calculated)

7.948

GRAVY (calculated)

-0.614

Length

963 amino acids

Sequence
(BLAST)

001: MNSILDRVAK DYGRRNNSSV YSSGDVFEPL SSGNAKQRAK LVEWFNSVLP HLSLPINASD EDLRALLVDG SVLCQLLNKL KPGSVPECGG TVHSPQLRSE
101: NIRRFLSAMD EMGLPRFYIS DLEQGSMKIV LESLLTLRAE FKLNDGGYNS STVLSSKYGA DASRRWKVLD ENSGCGDVSY IEEFSSRTHS TPSPRERMKT
201: GSDSKFQRVL RSPVVTEPSA ALIHHVGHRF HEVFQLKQGS HSEIPAARIS EMMRSNSLNI APTQSLLSVV NGILDESVER KNGEIPQRVA CLLRKVVQEI
301: ERRISTQAEH LRAQSNLFKS REEKYQSRIR IMEDLATGTS EETQIVMNQL HQIKNEKSKA EEKKKIEEQD VSILKEKDDQ IAALKQELEM AMKSYELKEN
401: EDHGKRITAL KKELEVVKKS YESKEKEDNK EITALKQEMG TLKKSYELKQ KEDNSQEITA LKQELEIVKK SYELKGKEAN SQEITALKQE LEIVKKSYES
501: KEKEKHKQEI TALKQELETV KNSYKSNEKE DHRREIADLK QEMEIAKRLY EQHTLEMKEK ATKAQQELEE KLKEAMSLLT ESRNRIKELE TFIESQSRSW
601: TKKEHIYQIF TEFHLGALRE LKFSSQSIRQ ELVKTQQSYG EEFNQLGAKV TALGHAAANY SALLAENRKL HNEVQELKGN IRVYCRIRPF LRGQKEKQSV
701: VEYIGENGEL IIVNPSKQGK EGRRSFKFNK VYNPAATQAD VYSDIQPLIQ SVLDGYNVCI FAYGQTGSGK TYTMTGPDKA TEENWGVNYR ALNDIFRISQ
801: TRVNTFTYEI TVQMMEIYNE QVRDLLSSDG SPRKYPFIFC MSEIFYSFDS SFLPLCCYCF VLHFQFISKM TISDLLITCI RLTVFLDLHT LGIVSAPQPN
901: GLAVPEASMH TVNKTSDVLN LMDIGLRNRA RGSTAMNERS SRSHRLAAIC AQCCHYSCSW DGY

Best Arabidopsis Sequence Match ( AT1G73860.1 )
(BLAST)

0001: MNPMRDQPGS PYGDSTPRSP FSPFSPLSVD DRHRNHADTK TPRSPFSPFS PLSGDERHKS LAESKFQQAL ASSGQLDPLS PGSMHHGGHK FHEVFQMKQG
0101: RYDLQASKIS EMMKSSSLDN APTQSLLSVL NGILDESIER KNGEIPQRVA CLLRKVVQEI ERRISTQAEH LRTQNNIFKT REEKYQSRIN VLEALASGTG
0201: VEHEIATQQL RQIETEKSMW EEKKKHEEED MVKLMKQNDQ HNLEISALKQ ELETTKRKYE QQYSQIESQT KTEKSKWEEQ KKNEEEDMDK LLKENDQFNL
0301: QISALRQELE TTRKAYEQQC SQMESQTMVA TTGLESRLKE LEQEGKVVNT AKNALEERVK ELEQMGKEAH SAKNALEEKI KQLQQMEKET KTANTSLEGK
0401: IQELEQNLVM WKTKVREMEK KSESNHQRWS QKELSYKSFI DNQSQALLEL RSYSRSIKQE ILKVQENYTD QFSQLGKKLI ELSNAAENYH AVLTENRKLF
0501: NELQELKGNI RVFCRVRPFL PAQGAANTVV EYVGEDGELV VTNPTRPGKD GLRQFKFNKV YSPTASQADV FSDIRPLVRS VLDGYNVCIF AYGQTGSGKT
0601: YTMTGPDGSS EEDWGVNYRA LNDLFKISQS RKGNISYEVG VQMVEIYNEQ VLDLLSDDNS QKKTLGILST TQQNGLAVPD ASMYPVTSTS DVITLMDIGL
0701: QNRAVGSTAL NERSSRSHSI VTVHVRGKDL KTGSVLYGNL HLVDLAGSER VDRSEVTGDR LREAQHINKS LSSLGDVIFS LASKSSHVPY RNSKLTQLLQ
0801: TSLGGRAKTL MFVQLNPDAT SYSESMSTLK FAERVSGVEL GAAKTSKEGK DVRDLMEQLA SLKDTIARKD EEIERLQHQP QRLQKSMMRR KSIGHTDDIN
0901: SDTGEYSSQS RYSVTDGESL ASSAEAEYDE RLSEITSDAA SMGTQGSIDV TKRPPRISDR AKSVTAKSST SVTRPLDKLR KVATRTTSTV AKVTGLTSSS
1001: KGLASSSIKK TGSTSSLAKS SKRWA

Arabidopsis Description

KIN14PKinesin-like protein KIN-14P [Source:UniProtKB/Swiss-Prot;Acc:Q0WN69]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.