Factsheet for PGSC0003DMT400059487

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400074040	Potato	cytosol	81.77	50.0
Os02t0229600-00	Rice	plasma membrane	72.93	23.61
Os06t0554700-01	Rice	cytosol	58.01	22.48
GSMUA_Achr1P02560_001	Banana	cytosol	74.59	22.09
KRH39191	Soybean	cytosol	77.9	15.29
Zm00001d012763_P002	Maize	cytosol	73.48	15.25
PGSC0003DMT400031815	Potato	cytosol	72.38	15.13
CDY19209	Canola	plastid	76.8	14.9
Bra015957.1-P	Field mustard	cytosol, plastid	65.75	14.23
TraesCS3A01G275300.1	Wheat	cytosol	76.24	14.2
TraesCS3B01G309000.1	Wheat	cytosol	76.24	14.2
TraesCS3D01G275200.1	Wheat	cytosol	76.24	14.2
HORVU3Hr1G070900.4	Barley	cytosol	76.24	14.15
VIT_17s0000g03700.t01	Wine grape	cytosol	78.45	14.07
Os01t0744000-01	Rice	cytosol	74.59	13.9
OQU87522	Sorghum	cytosol	72.93	13.85
OQU78322	Sorghum	cytosol	73.48	13.81
Os05t0521300-04	Rice	cytosol	76.24	13.64
Zm00001d043504_P030	Maize	cytosol	73.48	13.6
AT1G73860.1	Thale cress	cytosol, plastid	75.14	13.27
CDX68208	Canola	cytosol, plastid	73.48	13.14
PGSC0003DMT400020288	Potato	cytosol	50.83	13.11
GSMUA_AchrUn_...	Banana	cytosol	75.14	13.06
CDY11085	Canola	cytosol, plastid	72.93	13.04
Bra003825.1-P	Field mustard	cytosol, plastid	72.93	13.02
KRH41631	Soybean	cytosol	75.69	13.0
Bra025908.1-P	Field mustard	cytosol, plastid	76.24	12.81
GSMUA_Achr4P25620_001	Banana	cytosol	77.35	12.73
CDY26163	Canola	plastid	76.24	12.68
Zm00001d010790_P017	Maize	cytosol, endoplasmic reticulum, nucleus	71.82	12.58
TraesCS1D01G343800.1	Wheat	cytosol	75.69	12.3
TraesCS1A01G341500.1	Wheat	cytosol	75.69	12.3
PGSC0003DMT400018808	Potato	cytosol	67.96	12.24
TraesCS1B01G354200.2	Wheat	cytosol	74.59	12.12
PGSC0003DMT400063759	Potato	cytosol	67.4	12.04
AT1G18410.4	Thale cress	cytosol	75.14	11.8
HORVU1Hr1G075920.5	Barley	cytosol	76.24	11.69
KRH60336	Soybean	cytosol	77.35	11.3
PGSC0003DMT400048873	Potato	cytosol	50.83	11.18
GSMUA_Achr7P08590_001	Banana	cytosol	74.03	10.92
PGSC0003DMT400070107	Potato	cytosol	65.19	10.89
HORVU7Hr1G088620.8	Barley	cytosol	69.06	10.84
KXG20162	Sorghum	cytosol	72.38	10.84
PGSC0003DMT400056995	Potato	cytosol, plastid	66.85	10.47
TraesCS7D01G366700.2	Wheat	cytosol	68.51	10.19
TraesCS7B01G271700.2	Wheat	cytosol	68.51	10.19
TraesCS7A01G356000.1	Wheat	cytosol	68.51	10.16
TraesCS6A01G188600.1	Wheat	cytosol	73.48	10.0
PGSC0003DMT400049593	Potato	cytosol, plastid	44.75	9.95
PGSC0003DMT400056132	Potato	nucleus, plastid	44.2	9.94
Zm00001d016273_P001	Maize	cytosol	72.38	9.83
CDX73023	Canola	cytosol, plastid	48.07	9.72
TraesCS6B01G215900.1	Wheat	cytosol	74.03	9.63
TraesCS6D01G177300.1	Wheat	cytosol	74.03	9.62
CDX96493	Canola	cytosol, plastid	48.62	9.34
HORVU0Hr1G015810.3	Barley	cytosol	70.72	9.31
KXG29848	Sorghum	cytosol	71.27	8.94
PGSC0003DMT400041748	Potato	cytosol	48.62	7.99
Zm00001d038797_P001	Maize	cytosol	33.15	7.13
PGSC0003DMT400024387	Potato	cytosol, plastid	38.67	5.53
Zm00001d036987_P001	Maize	cytosol, plastid	27.07	4.67
Solyc12g036810.1.1	Tomato	extracellular	19.34	3.63

Protein Annotations

MapMan:20.1.3.12	Gene3D:3.40.850.10	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam
InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	UniProt:M1C4B2	InterPro:P-loop_NTPase	PFAM:PF00225
EnsemblPlantsGene:PGSC0003DMG400023112	PGSC:PGSC0003DMG400023112	EnsemblPlants:PGSC0003DMT400059487	PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067
PANTHER:PTHR24115	PANTHER:PTHR24115:SF716	SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI0002953A76	:

Description

Kinesin [Source:PGSC_GENE;Acc:PGSC0003DMG400023112]

Coordinates

chr12:-:41232253..41235660

Molecular Weight (calculated)

19781.7 Da

IEP (calculated)

10.287

GRAVY (calculated)

-0.354

Length

181 amino acids

Sequence
(BLAST)

001: MHTVNKTSDV LNLMDIGLRN RARGSTAMNE RSSRSHSVVT IHVRGMDIKS GSSMCSSLHL VDLAGSERVD RSEVTGDRLK EAQHINKSLS ALGDVIYALA
101: QKNAHVPFRN SKLTQVLQTS LGGQAKTLMF VQLNPEVGSH SETTSTLKFA ERASGVELGA ARSSKEGRDV RDLMEQVFFK L

Best Arabidopsis Sequence Match ( AT1G18410.2 )
(BLAST)

0001: MMNSLTDQSG SSHGGSTPRS PFSPSSPRER HNKGLADSRF QRPLPNSSAL DPSSPGSMLH GGHKSHEAFQ MKQGRFDLQA AKISELMKSN NLDNAPTQSL
0101: LSIVNGILDE TIERKNGELP QRVACLLRKV VQEIERRIST QSEHLRTQNS VFKAREEKYQ SRIKVLETLA SGTSEENEIA TRQLRRIKTE KSKLEEKKKD
0201: KEEDMVGIEK ENGHYNLEIS TLRRELETTK KAYEQQCLQM ESKTKGATAG IEDRVKELEQ MRKDASVARK ALEERVRELE KMGKEADAVK MNLEEKVKEL
0301: QKYKDETITV TTSIEGKNRE LEQFKQETMT VTTSLEAQNR ELEQAIKETM TVNTSLEAKN RELEQSKKET MTVNTSLKAK NRELEQNLVH WKSKAKEMEE
0401: KSELKNRSWS QKELSYRSFI SFQCQALQEL RFYSKSIKQE ILKVQDKYTV EFSQLGRKLL ELGDAAANYH EVLTENQKLF NELQELKGNI RVYCRVRPFL
0501: RGQGASKTVV EHIGDHGELV VLNPTKPGKD AHRKFRFNKV YSPASTQAEV FSDIKPLIRS VLDGYNVCIF AYGQTGSGKT YTMTGPDGAS EEEWGVNYRA
0601: LNDLFRISQS RKSNIAYEVG VQMVEIYNEQ VRDLLSGDSS QKKLGILSTT QQNGLAVPDA SMYPVTSTSD VLELMSIGLQ NRVVSSTALN ERSSRSHSIV
0701: TVHVRGKDLK TGSALYGNLH LVDLAGSERV DRSEVTGDRL KEAQHINKSL SALGDVIFSL ASKSSHVPYR NSKLTQLLQS SLGGRAKTLM FVQLNPDITS
0801: YSESMSTLKF AERVSGVELG AAKSSKDGRD VRELMEQLGS LKDTIARKDD EIERLHLLKD INYPQRLQKK SLGQSDDFNS EAGDSQLSIE DDSRFQHDYT
0901: RQSRHSVTDG EALASSTDAE YDDETEGSTD APCAAEGRKP LKISDKPKPV TPRSNTTTSR PLDKLKQVTM RTTNIAKATS ALLSPSSQGM KKTGSASNFL
1001: KSPKDSKRWS

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT1G18410]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.