CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45358	Canola	cytosol	95.5	95.86
CDY25511	Canola	cytosol	86.41	88.48
CDY34366	Canola	cytosol	86.22	88.29
AT1G63640.3	Thale cress	cytosol	87.63	87.22
CDY46382	Canola	cytosol	64.01	74.56
CDY39749	Canola	cytosol	63.64	71.17
GSMUA_Achr1P02560_001	Banana	cytosol	36.64	63.99
VIT_02s0025g03480.t01	Wine grape	cytosol	58.67	58.67
Os02t0229600-00	Rice	plasma membrane	30.18	57.6
PGSC0003DMT400031815	Potato	cytosol	45.27	55.77
KRH41185	Soybean	cytosol	54.83	54.07
KRH59901	Soybean	cytosol	54.92	53.96
Os06t0554700-01	Rice	cytosol	21.56	49.25
Os01t0744000-01	Rice	cytosol	43.86	48.2
GSMUA_AchrUn_...	Banana	cytosol	46.95	48.13
OQU87522	Sorghum	cytosol	42.64	47.74
HORVU3Hr1G070900.4	Barley	cytosol	43.49	47.59
TraesCS3A01G275300.1	Wheat	cytosol	43.3	47.53
TraesCS3D01G275200.1	Wheat	cytosol	43.11	47.33
TraesCS3B01G309000.1	Wheat	cytosol	43.11	47.33
Os05t0521300-04	Rice	cytosol	44.8	47.23
GSMUA_Achr4P25620_001	Banana	cytosol	48.36	46.91
Zm00001d012763_P002	Maize	cytosol	38.33	46.9
OQU78322	Sorghum	cytosol	42.27	46.83
Zm00001d043504_P030	Maize	cytosol	42.83	46.73
CDY19209	Canola	plastid	40.3	46.09
CDX68208	Canola	cytosol, plastid	40.77	42.98
CDX73023	Canola	cytosol, plastid	35.9	42.79
CDY11085	Canola	cytosol, plastid	40.49	42.69
TraesCS1A01G341500.1	Wheat	cytosol	44.42	42.55
TraesCS1D01G343800.1	Wheat	cytosol	44.14	42.28
TraesCS1B01G354200.2	Wheat	cytosol	44.05	42.19
GSMUA_Achr7P08590_001	Banana	cytosol	48.36	42.05
Zm00001d010790_P017	Maize	cytosol, endoplasmic reticulum, nucleus	40.58	41.92
CDX96493	Canola	cytosol, plastid	36.74	41.61
Zm00001d038797_P001	Maize	cytosol	32.61	41.38
HORVU7Hr1G088620.8	Barley	cytosol	43.77	40.5
CDY26163	Canola	plastid	40.67	39.89
KXG20162	Sorghum	cytosol	44.52	39.29
TraesCS7D01G366700.2	Wheat	cytosol	44.8	39.28
TraesCS7A01G356000.1	Wheat	cytosol	44.89	39.23
TraesCS7B01G271700.2	Wheat	cytosol	44.7	39.19
CDY67329	Canola	cytosol	27.46	35.73
CDY53341	Canola	cytosol	30.18	35.0
CDY19745	Canola	cytosol	30.55	34.75
CDX80606	Canola	cytosol	31.4	33.74
CDY57719	Canola	cytosol	30.93	33.54
HORVU1Hr1G075920.5	Barley	cytosol	37.11	33.53
CDY32155	Canola	cytosol	31.21	33.5
CDX80111	Canola	cytosol	30.83	33.23
CDY31108	Canola	cytosol	30.27	33.13
CDX88251	Canola	cytosol	29.33	32.98
Zm00001d036987_P001	Maize	cytosol, plastid	32.43	32.95
Zm00001d016273_P001	Maize	cytosol	41.05	32.86
TraesCS6A01G188600.1	Wheat	cytosol	40.86	32.78
HORVU0Hr1G015810.3	Barley	cytosol	41.24	32.0
CDY08613	Canola	cytosol	24.93	31.97
TraesCS6B01G215900.1	Wheat	cytosol	41.71	31.97
TraesCS6D01G177300.1	Wheat	cytosol	41.71	31.95
KXG29848	Sorghum	cytosol	43.11	31.88
CDY20350	Canola	cytosol	32.33	31.74
CDY29715	Canola	cytosol	31.49	31.46
CDY00920	Canola	cytosol	26.24	29.85
CDY29282	Canola	cytosol	18.56	28.01
CDX89269	Canola	cytosol	18.46	27.86
CDY06633	Canola	cytosol	19.31	27.32
CDY05571	Canola	cytosol	19.68	27.17
CDY68543	Canola	cytosol, plastid	19.12	27.09
CDY67586	Canola	cytosol, plastid	19.12	27.09
CDY28759	Canola	cytosol, plastid	19.12	27.06
CDY25031	Canola	cytosol	19.68	26.92
CDY46372	Canola	cytosol, plastid	19.96	26.83
CDY39158	Canola	cytosol, plastid	19.87	26.73
CDX99979	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	19.49	26.26
CDY19726	Canola	cytosol	19.49	25.97
CDX72881	Canola	cytosol	21.84	21.57
CDX82160	Canola	cytosol	22.59	21.25
CDX96387	Canola	cytosol	21.84	21.22
CDY03649	Canola	cytosol	22.59	20.9
CDX76903	Canola	cytosol	19.68	19.96
CDY13741	Canola	cytosol	19.59	19.92
CDY55105	Canola	cytosol	17.34	14.71
CDX81427	Canola	cytosol	17.24	14.55
CDY18577	Canola	cytosol	17.15	14.47
CDY57771	Canola	cytosol, plastid	17.43	13.52

Protein Annotations

Gene3D:1.10.418.10	MapMan:20.1.3.12	Gene3D:3.40.850.10	GO:A0A078JDY6	UniProt:A0A078JDY6	EnsemblPlants:CDY62807
ProteinID:CDY62807	ProteinID:CDY62807.1	InterPro:CH-domain	InterPro:CH_dom_sf	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787
EnsemblPlantsGene:GSBRNA2T00037624001	InterPro:IPR001715	InterPro:IPR001752	InterPro:IPR036872	InterPro:IPR036961	InterPro:Kinesin-like_fam
InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PFAM:PF00307
PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50021	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF741
SMART:SM00033	SMART:SM00129	SUPFAM:SSF47576	SUPFAM:SSF52540	UniParc:UPI0004EEDEA3	SEG:seg

Description

BnaCnng41050DBnaCnng41050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JDY6]

Coordinates

chrLK034195:-:14328..20756

Molecular Weight (calculated)

119028.0 Da

IEP (calculated)

6.946

GRAVY (calculated)

-0.600

Length

1067 amino acids

Sequence
(BLAST)

0001: MSGVYAPSDG TCFLSFDGSE SMGDSKNGSH QSLVEWLNQT LPYLNLPLEA SEDELRVCLR DGTVLCSLLN QLSPGSMRMG GSFEPAYVKI ERFLTAMDEM
0101: ALPRFEVSDI EQGDLVPVLQ SLKALKASFS DGGYDKNSLC AKRRWSLPED DSDSKGDDRN FIDGFQSKEE SEIDISDAKI SELLKSNSLR NAPTRSLFDM
0201: LEQLLDECVK KMNGHVSHAM ASLLSALVQV IEQRISNQAD NLKNQNILFR VREEKYRSRI KVLETLAAGT TQENEIVTNC MEHIKLEKTR IEERERAEEK
0301: DVVHLKMEKE RTDAEICKLK QELKLVKETH ENQCLELEAK AQHDKVELEK KLKDAELQVV DSTRKIKELE KLCQSNSQKW KKKECTYQSF INNQYGALQD
0401: LNATSVSIKH EVLSTQKKYF EDLNYYGLKL KGVVDAAKNY HVVLEENRRL YNEVQELKGN IRVYCRIRPF LPGQNSRQTS IEYIGENGEL VVANPFKQGK
0501: DTHRLFKFNK VFGQAATQEE VFLDTRPLIR SILDGYNVCI FAYGQTGSGK TYTMSGPSIT SKEDWGVNYR ALNDLFQLTQ IRRNAVVYEV GVQMVEIYNE
0601: QVRDILSDSG SNRRYPFLNS YRIWNTALPN GLAVPDASMH SVRSTEDVLE LMNIGLMNRT VGATALNERS SRSHCVLSVH VRGVDVETDS VLRGSLNLVD
0701: LAGSERVDRS EATGERLKEA QHINKSLSAL GDVIFALAHK NPHVPYRNSK LTQVLQSSLG GQAKTLMFVQ VNPDGDSYAE TVSTLKFAER VSGVELGAAK
0801: SNKEGRDVRQ LMEQVSNLKD VIAKKDEELQ NFQKPTGNNA TVPKRGLSKL RLLGPSSPRR HSIGASPNAR RGKTSDLIGR TTSDVDNCSE YSSKNSDSGS
0901: PHSSDELKHR KDLLHQPSKF AGGGKETDVE EDIELIGLAD ADSEERLSDI SDSCLSMGTE TDGSVSSVVE LTLFPETVKP LEISERPGAQ LAPEKPEKSV
1001: KMGNKTEPKE SRSSIPSKIP KQTLKPPGQT RPSRLSVAAS SSSKALTSAR RPTISTSSSA KPLNKRR

Best Arabidopsis Sequence Match ( AT1G63640.3 )
(BLAST)

0001: MSSHLSQDAN MNGVYVRSDV SSMLSFDGSE SRESMDDSKK GHQSLVEWLN ETLPYLKLPW EASEDELRAC LRDGTVLCSL LNQLSPGSMR MGGSFEPASV
0101: KIERFLTAMD EMALPRFEVS DIEQGDMVPV LQSLKALKAS FSDGSYDKNS LAARRRWSLP EDHSDSRGDD RNFTDGFQSK EGSEIDMSDA KISDLLKSNS
0201: LRNAPTRSLF DMLDKLLDES MTKMNGHVSH AMASLLSALV QVIEQRISNQ ADNLKNQNIL FRVREEKYRS RIKVLESLAA GTTKENEIVT NCMEHIKLEK
0301: TRIEEKERSE EKDVVRLRKE KERSDAEIRQ LKQELKLVKE THENQCLELE AKAQKTRDEL EKKLKDAELH VVDSSRKVKE LEKLCQSKSQ RWEKKECIYQ
0401: NFIDNHSGAL QELSATSLSI KHEVVRTQRK YFEDLNYYGL KLKGVADAAK NYHVVLEENR RLYNEVQELK GNIRVYCRIR PFLPGQNSRQ TTIEYIGETG
0501: ELVVANPFKQ GKDTHRLFKF NKVFDQAATQ EEVFLDTRPL IRSILDGYNV CIFAYGQTGS GKTYTMSGPS ITSKEDWGVN YRALNDLFLL TQSRQNTVMY
0601: EVGVQMVEIY NEQVRDILSD GGSSRRLGIW NTALPNGLAV PDASMHCVRS TEDVLELMNI GLMNRTVGAT ALNERSSRSH CVLSVHVRGV DVETDSILRG
0701: SLHLVDLAGS ERVDRSEATG ERLKEAQHIN KSLSALGDVI FALAHKNPHV PYRNSKLTQV LQSSLGGQAK TLMFVQVNPD GDSYAETVST LKFAERVSGV
0801: ELGAAKSSKE GRDVRQLMEQ VSNLKDVIAK KDEELQNFQK VKGNNATSLK RGLSNLRLVG PTSPRRHSIG ASPNARRGKA SGLFGRGTSD VDNCSEYSSK
0901: HSDSGSQQSS DERKHQKDYH QPSKFAGAAK GIDFDDEDVE LVGLADADSE DRLSDISDSC LSMGTETDGS ISSAVELTLF PETAKPLELI ERPEARMTSE
1001: KLEKSVKMGK TEPKDSRTNI PSKIPKQTLK PPGQTRPSRL SIATSSSSKA LTGAKRPTIS TSSSAKPLNR RR

Arabidopsis Description

P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain [Source:TAIR;Acc:AT1G63640]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.