CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00920	Canola	cytosol	95.43	84.65
Bra029829.1-P	Field mustard	cytosol	99.52	83.22
AT3G10310.2	Thale cress	cytosol	86.54	74.3
VIT_08s0007g08800.t01	Wine grape	cytosol	57.21	49.48
KRH66897	Soybean	cytosol	56.49	46.81
KRG95233	Soybean	cytosol	56.61	45.51
HORVU3Hr1G033450.10	Barley	cytosol	41.47	43.07
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	35.22	40.92
TraesCS3B01G196600.1	Wheat	cytosol	47.96	40.63
TraesCS3D01G172000.1	Wheat	cytosol	47.84	40.57
TraesCS3A01G169800.2	Wheat	cytosol	47.84	40.57
Zm00001d039617_P006	Maize	cytosol	46.27	39.33
Os01t0243100-01	Rice	cytosol	22.36	39.32
KXG31699	Sorghum	cytosol	46.27	38.58
PGSC0003DMT400070107	Potato	cytosol	48.92	37.55
Solyc04g016080.1.1	Tomato	nucleus	55.17	37.29
CDY53341	Canola	cytosol	35.94	32.5
CDY19745	Canola	cytosol	36.06	31.98
CDY31108	Canola	cytosol	36.9	31.49
CDY57719	Canola	cytosol	37.14	31.4
CDX80111	Canola	cytosol	37.26	31.31
CDX88251	Canola	cytosol	35.46	31.09
CDY32155	Canola	cytosol	36.9	30.89
CDX80606	Canola	cytosol	36.54	30.61
CDY67329	Canola	cytosol	29.33	29.76
CDY46382	Canola	cytosol	32.09	29.15
CDY39749	Canola	cytosol	32.21	28.09
CDY29715	Canola	cytosol	35.22	27.43
CDY20350	Canola	cytosol	35.22	26.95
CDY34366	Canola	cytosol	32.57	26.01
CDY25511	Canola	cytosol	32.45	25.91
CDY19209	Canola	plastid	28.25	25.19
CDY62807	Canola	cytosol	31.97	24.93
CDY45358	Canola	cytosol	31.61	24.74
CDY29282	Canola	cytosol	20.07	23.62
CDX89269	Canola	cytosol	20.07	23.62
CDY06633	Canola	cytosol	21.27	23.47
CDY28759	Canola	cytosol, plastid	21.27	23.47
CDY67586	Canola	cytosol, plastid	21.15	23.37
CDY68543	Canola	cytosol, plastid	21.15	23.37
CDX68208	Canola	cytosol, plastid	28.25	23.22
CDY11085	Canola	cytosol, plastid	28.12	23.12
CDY05571	Canola	cytosol	20.67	22.25
CDY25031	Canola	cytosol	20.67	22.05
CDX99979	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.67	21.72
CDY19726	Canola	cytosol	20.79	21.6
CDY26163	Canola	plastid	28.12	21.51
CDY46372	Canola	cytosol, plastid	19.83	20.78
CDY39158	Canola	cytosol, plastid	19.71	20.68
CDX73023	Canola	cytosol, plastid	22.12	20.56
CDX96493	Canola	cytosol, plastid	22.72	20.06
CDX96387	Canola	cytosol	24.88	18.85
CDX72881	Canola	cytosol	24.4	18.8
CDY13741	Canola	cytosol	23.08	18.3
CDX82160	Canola	cytosol	24.88	18.25
CDX76903	Canola	cytosol	23.08	18.25
CDY03649	Canola	cytosol	24.4	17.61
CDX81427	Canola	cytosol	20.79	13.68
CDY18577	Canola	cytosol	20.67	13.6
CDY55105	Canola	cytosol	20.55	13.59
CDY57771	Canola	cytosol, plastid	21.03	12.72

Protein Annotations

Gene3D:1.10.418.10	MapMan:20.1.3.12	Gene3D:3.40.850.10	GO:A0A078F9Y6	UniProt:A0A078F9Y6	EnsemblPlants:CDY08613
ProteinID:CDY08613	ProteinID:CDY08613.1	InterPro:CH-domain	InterPro:CH_dom_sf	GO:GO:0000166	GO:GO:0003674
GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00000407001
InterPro:IPR001715	InterPro:IPR001752	InterPro:IPR036872	InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_dom
InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PFAM:PF00307	PFAM:PF16796	PRINTS:PR00380
PFscan:PS50021	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF456	SMART:SM00033	SMART:SM00129
SUPFAM:SSF47576	SUPFAM:SSF52540	UniParc:UPI0004EF3CA9	InterPro:Vik1/Cik1_MT-bd	SEG:seg	:

Description

BnaA05g28490DBnaA05g28490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F9Y6]

Coordinates

chrLK031986:-:928677..933631

Molecular Weight (calculated)

92695.4 Da

IEP (calculated)

9.090

GRAVY (calculated)

-0.536

Length

832 amino acids

Sequence
(BLAST)

001: MASAITTGLH EFHLASRRAE EAASRRFQAV QWLQSIVGQL GISDQPSEKE FVSCLRNGLI LCNAINKIHP GAVSKVVESY SHLQSFNREY QLPQAYQYFE
101: NVRNFLVALE QLRLPGFEAS DLEKDNLEAG SVSKVVDCIL GLKGYHECKM TSSGYKHVKT PTFQLSATKV LPVSASKASR QLERNDCADG ESDQLKVIAK
201: LVADHIFNSK ENIDENLISL ENGSENSTVN FQKIISRFPE LQSIFKNFLN EGTPKPSDVK PMPLEELPVN EDDKCRTSLL HTTSYNHKRL LKTQENELAV
301: LKTLFIQTKQ DFKEFQAHQQ RDLMELGNQM QEMSSAAQGY YKVVEENRKL YNMVQDLKGN IRVFCRVRPI FNSEMKGVID YIGKDGSLFV LDPSKPQKDA
401: RKTFQFNQVF APTATQDDVF RETQPLIRSV MDGYNVCIFA YGQTGSGKTY TMSGPPGRSA TEMGINYLAL NDLFLICDKR KDMMTTCSSE DDGLSLPDAT
501: MHSVNSTMDV LRLMEAGEVN RAVSSTSMNN RSSRSHSIFM VHVRGKDTSG GTIRSCLHLV DLAGSERVDK SEVTGDRLKE AQYINKSLSC LGDVIYALAQ
601: KNSHIPYRNS KLTLLLQDAL GGQAKTLMFA HLSPEEDSFG ETVSTLKFAQ RVSTVELGVA RAHKETREEE NSKGDPTMEV QQVKSPLMKV DGRTSIPQLQ
701: LLQTPVKEDP RNEIQFISVD SRTNGKSSHI RKSLRTIGKL INGSEKRKEN IPTNPRSPLG VSNNFSGVKS PHTTNAKTLR RQSLTGVMPP GPERSRRSSI
801: GGNPIENGES GVRTAKTPPP VRSSSKIGKK RT

Best Arabidopsis Sequence Match ( AT3G10310.2 )
(BLAST)

001: MTTGLHEFNL ASRRAEEAAA RRFQAVQWLK SVVGQLGIPN QPSEKEFISC LRNGMILCNA INKIHPGAVS KVVENYSYLN GEYQLPPAYQ YFENVRNFLV
101: ALETLRLPGF EASDLEKDNL ESGSVTKVVD CILGLKAYHE CKLPSNGNGL YKHVKTPTFQ LSATKIHPTL SASKTSRHLD MSSVRERNDC TDGESDKLKG
201: IAKLFADHIF SSKENIDENL VSLENGSENS RANFEKILSR FPELQSVFKN LLSEGTLKPS DLKSMPLEEL PVHEEDQSSR SLSHKTKCNH KRLLKTQEKE
301: LAVLKNLFIK TKQDFKEFQV YLQRDLMELG NQMQEMSSAA QGYYKVVEEN RKLYNMVQDL KGNIRVYCRV RPIFNSEMDG VIDYIGKDGS LFVLDPSKPY
401: KDARKTFQFN QVFGPTATQD DVFRETQPLI RSVMDGYNVC IFAYGQTGSG KTYTMSGPPG RSATEMGINY LALSDLFLIC DRRKDMMTYE IYVQMVEIYN
501: EQVRDLLAEN SSCTRLDIRT CSSDDDGLSL PDATMHSVNS TKDVLQLMEA GEVNRAVSST SMNNRSSRSH SIFMVHVRGK DTSGGTLRSC LHLVDLAGSE
601: RVDKSEVTGD RLKEAQYINK SLSCLGDVIS ALAQKNSHIP YRNSKLTLLL QDSLGGQAKT LMFAHLSPEE DSFGETISTL KFAQRVSTVE LGAARAHKET
701: REVMHLKEQI ENLKRALGTE EWNNVSNGSK EIKSPFSRPI ATTERTPPRL RRLSIENCSS TKANLEDRRG IKSPLASRRA QILSLEGPMS CKNEENGKGD
801: PTMEVHQLKN PRSPLSSYQN RAVKVDGRTS IPQLQLLQTP VKGASRNDIQ MISVDSKTNG KGSHIRKSLR TIGKLINGSE KRKENIPADP RSPLGVANNF
901: SHIKSPDTSN AKTMRRQSLT GVMPPGQERS RRSSIGGKPI ENGVNVTDSR NAKTPPPMRS ASKIGKKWA

Arabidopsis Description

P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMT1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.