CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039617_P006	Maize	cytosol	88.98	90.7
HORVU3Hr1G033450.10	Barley	cytosol	60.92	75.91
Os01t0243100-01	Rice	cytosol	35.17	74.21
TraesCS3D01G172000.1	Wheat	cytosol	72.55	73.8
TraesCS3A01G169800.2	Wheat	cytosol	72.44	73.7
TraesCS3B01G196600.1	Wheat	cytosol	72.14	73.32
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	41.18	57.4
VIT_08s0007g08800.t01	Wine grape	cytosol	46.59	48.34
CDY08613	Canola	cytosol	38.58	46.27
AT3G10310.2	Thale cress	cytosol	44.19	45.51
KRH66897	Soybean	cytosol	45.49	45.22
KRG95233	Soybean	cytosol	46.39	44.73
CDY00920	Canola	cytosol	41.88	44.56
Bra029829.1-P	Field mustard	cytosol	43.99	44.12
PGSC0003DMT400070107	Potato	cytosol	40.88	37.64
Solyc04g016080.1.1	Tomato	nucleus	44.69	36.23
KXG23658	Sorghum	cytosol	33.77	35.4
EER94990	Sorghum	cytosol	35.07	34.48
KXG29090	Sorghum	cytosol	33.87	33.97
OQU81751	Sorghum	cytosol	33.57	32.75
OQU87522	Sorghum	cytosol	29.06	30.43
OQU78322	Sorghum	cytosol	29.36	30.43
KXG20162	Sorghum	cytosol	30.46	25.14
OQU88296	Sorghum	cytosol	16.23	22.75
KXG21940	Sorghum	cytosol, plastid	20.24	22.67
EES12911	Sorghum	cytosol	17.64	22.31
KXG24011	Sorghum	nucleus	20.64	21.11
KXG29848	Sorghum	cytosol	30.06	20.79
KXG40352	Sorghum	cytosol, mitochondrion, plastid	23.95	19.93
EES13049	Sorghum	cytosol	16.63	13.06

Protein Annotations

Gene3D:1.10.418.10	MapMan:20.1.3.12	Gene3D:3.40.850.10	UniProt:A0A1B6Q1A3	InterPro:CH-domain	InterPro:CH_dom_sf
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0005874	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016787	InterPro:IPR001715	InterPro:IPR001752	InterPro:IPR036872	InterPro:IPR036961	EnsemblPlants:KXG31699
ProteinID:KXG31699	ProteinID:KXG31699.1	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf
InterPro:P-loop_NTPase	PFAM:PF00225	PFAM:PF00307	PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50021
PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF456	SMART:SM00033	SMART:SM00129	EnsemblPlantsGene:SORBI_3003G043900
SUPFAM:SSF47576	SUPFAM:SSF52540	UniParc:UPI00081ACCAC	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:-:4048958..4055374

Molecular Weight (calculated)

110168.0 Da

IEP (calculated)

9.471

GRAVY (calculated)

-0.515

Length

998 amino acids

Sequence
(BLAST)

001: MAEPRRVSFR DGRLASRKAE EAALRRHQAA AWLQAMVGSF GLAPYPSEQE FVASLRNGIV LCKAINKLQP GAVAKIITNA PCDSQPLTAF QYFENIRNFL
101: VAVNKMKLPS FEASDLDKDS LDAGTVGKIV DCVISLKSYH EWKQAGGANG PIKYMKSPLA VRSSQLQSEN VALGPSPSQK RLDLTEADAD TQPFQNVDPN
201: MKEAVEKLKK VIVDSMLSYK ENFDQDILKK DPTKLIGAVL ANQLGKEQLL SPEKLITENA PTHCIEHSSS QIENKQLLLQ AHETELLDLK KMFQDVKVNF
301: RSLQTQFLDD MAKLGENIQD LSKAALGYNQ AVKENRNLYN MLQELRGNIR VFCRIRPLLN SESISSIEHV GSDGSVMVYD PVKPQSARKI FQFNKVFGPT
401: TTQDEVYKET QPFVRSVMDG YNVCIFAYGQ TGSGKTHTMC GPSGGLSKDF GINYMALNDL FNISTSREDV KYDIRVQMVE IYNEQVRDLL NEDRSSTKLD
501: IRASLNNGLL NLPDAKIYPV QSPSDVINLM QLGEKHRASG STAINHRSSR SHSILTVHVN GKDIAGNVSR SSLHLVDLAG SERIDRSEAT GDRLKEAQHI
601: NKSLSCLGDV INALAQKNSH IPYRNSKLTQ LLQSSLGGNA KTLMFAHISP EAESCAETLS TLKFAQRAST VELGTAHANK ESSEIRELKE QVDTLKKALA
701: NKELEKSSLK LKENATTSER TKQVLDRTPP RPRRLSLENA SSGKAKMPER KILKSPRSAM GITHDKECNS DGFRHTSHHE SLLQMPATCA EDLVREEEKI
801: ICTVDTVEFC QLPPEAYNLL KQSGLNTPEA ALCRSRNLCT EASCGDAPSS TAKLEKIMTG TAVKKGSHLR KSIQSSIGRL IHGTERRNVQ HSAQGTPTKI
901: TANACHNIAS PVTADIRLRR RQSLTGMPPP PTMSRRSSLG GKSDTSIRNS QTTSACAASK YKPLPFSWIP WPEQGSNDKR GAKTPPPVNS AAKAKRWL

Best Arabidopsis Sequence Match ( AT3G10310.2 )
(BLAST)

001: MTTGLHEFNL ASRRAEEAAA RRFQAVQWLK SVVGQLGIPN QPSEKEFISC LRNGMILCNA INKIHPGAVS KVVENYSYLN GEYQLPPAYQ YFENVRNFLV
101: ALETLRLPGF EASDLEKDNL ESGSVTKVVD CILGLKAYHE CKLPSNGNGL YKHVKTPTFQ LSATKIHPTL SASKTSRHLD MSSVRERNDC TDGESDKLKG
201: IAKLFADHIF SSKENIDENL VSLENGSENS RANFEKILSR FPELQSVFKN LLSEGTLKPS DLKSMPLEEL PVHEEDQSSR SLSHKTKCNH KRLLKTQEKE
301: LAVLKNLFIK TKQDFKEFQV YLQRDLMELG NQMQEMSSAA QGYYKVVEEN RKLYNMVQDL KGNIRVYCRV RPIFNSEMDG VIDYIGKDGS LFVLDPSKPY
401: KDARKTFQFN QVFGPTATQD DVFRETQPLI RSVMDGYNVC IFAYGQTGSG KTYTMSGPPG RSATEMGINY LALSDLFLIC DRRKDMMTYE IYVQMVEIYN
501: EQVRDLLAEN SSCTRLDIRT CSSDDDGLSL PDATMHSVNS TKDVLQLMEA GEVNRAVSST SMNNRSSRSH SIFMVHVRGK DTSGGTLRSC LHLVDLAGSE
601: RVDKSEVTGD RLKEAQYINK SLSCLGDVIS ALAQKNSHIP YRNSKLTLLL QDSLGGQAKT LMFAHLSPEE DSFGETISTL KFAQRVSTVE LGAARAHKET
701: REVMHLKEQI ENLKRALGTE EWNNVSNGSK EIKSPFSRPI ATTERTPPRL RRLSIENCSS TKANLEDRRG IKSPLASRRA QILSLEGPMS CKNEENGKGD
801: PTMEVHQLKN PRSPLSSYQN RAVKVDGRTS IPQLQLLQTP VKGASRNDIQ MISVDSKTNG KGSHIRKSLR TIGKLINGSE KRKENIPADP RSPLGVANNF
901: SHIKSPDTSN AKTMRRQSLT GVMPPGQERS RRSSIGGKPI ENGVNVTDSR NAKTPPPMRS ASKIGKKWA

Arabidopsis Description

P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMT1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.