CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95233	Soybean	cytosol	91.63	88.89
VIT_08s0007g08800.t01	Wine grape	cytosol	56.77	59.25
AT3G10310.2	Thale cress	cytosol	54.88	56.86
CDY08613	Canola	cytosol	46.81	56.49
CDY00920	Canola	cytosol	51.89	55.54
Bra029829.1-P	Field mustard	cytosol	53.69	54.17
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	35.96	50.42
HORVU3Hr1G033450.10	Barley	cytosol	39.44	49.44
Os01t0243100-01	Rice	cytosol	23.01	48.84
Zm00001d039617_P006	Maize	cytosol	45.42	46.58
TraesCS3A01G169800.2	Wheat	cytosol	45.12	46.18
TraesCS3B01G196600.1	Wheat	cytosol	45.12	46.13
TraesCS3D01G172000.1	Wheat	cytosol	45.02	46.08
KXG31699	Sorghum	cytosol	45.22	45.49
Solyc04g016080.1.1	Tomato	nucleus	55.28	45.09
PGSC0003DMT400070107	Potato	cytosol	48.61	45.02
KRH69263	Soybean	cytosol	36.55	36.48
KRH33856	Soybean	cytosol	35.76	36.37
KRG96486	Soybean	cytosol	36.55	36.37
KRH31841	Soybean	cytosol	36.65	36.36
KRG96746	Soybean	cytosol	36.85	36.1
KRH68465	Soybean	cytosol	36.26	35.72
KRH68226	Soybean	cytosol	36.35	35.47
KRH14189	Soybean	cytosol	35.66	31.46
KRG98432	Soybean	cytosol	34.66	30.55
KRH04655	Soybean	cytosol	17.03	30.54
KRH46431	Soybean	cytosol, plastid	34.36	30.26
KRH59901	Soybean	cytosol	31.08	28.73
KRH41185	Soybean	cytosol	30.78	28.56
KRH39191	Soybean	cytosol	25.1	27.33
KRH12947	Soybean	cytosol	0.4	26.67
KRH38546	Soybean	cytosol	14.54	26.07
KRG92857	Soybean	cytosol	19.72	25.45
KRH33944	Soybean	cytosol	19.62	25.22
KRH41631	Soybean	cytosol	26.2	24.95
KRH60336	Soybean	cytosol	30.28	24.54
KRG96836	Soybean	cytosol	20.22	24.52
KRH73940	Soybean	cytosol	35.56	24.44
KRH68554	Soybean	cytosol	20.12	24.31
KRH49904	Soybean	nucleus	17.73	22.62
KRH55613	Soybean	cytosol	17.53	22.56
KRH41997	Soybean	nucleus	17.63	22.41
KRH33069	Soybean	cytosol	6.97	22.08
KRH25893	Soybean	cytosol	17.53	22.03
KRH21648	Soybean	nucleus	17.53	22.03
KRH10687	Soybean	nucleus	17.53	22.0
KRH27115	Soybean	cytosol	16.53	21.78
KRH22225	Soybean	cytosol	16.43	21.65
KRH13631	Soybean	cytosol	22.01	21.19
KRH43838	Soybean	cytosol	22.01	21.13
KRH74459	Soybean	cytosol	22.31	21.09
KRH39483	Soybean	cytosol	22.41	21.09
KRH33051	Soybean	cytosol	6.87	20.66
KRH76479	Soybean	plastid	18.23	14.42
KRH28979	Soybean	cytosol, plastid	18.13	14.34
KRH39362	Soybean	cytosol	17.83	14.11
KRH07792	Soybean	cytosol	17.83	14.08

Protein Annotations

Gene3D:1.10.418.10	MapMan:20.1.3.12	Gene3D:3.40.850.10	UniProt:A0A0R0KJ22	EMBL:ACUP02002015	InterPro:CH-domain
InterPro:CH_dom_sf	ncoils:Coil	EnsemblPlantsGene:GLYMA_03G134900	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774
GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005871	GO:GO:0007018	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	GO:GO:0016887	InterPro:IPR001715	InterPro:IPR001752
InterPro:IPR036872	InterPro:IPR036961	EnsemblPlants:KRH66897	ProteinID:KRH66897	ProteinID:KRH66897.1	InterPro:Kinesin-like_fam
InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PFAM:PF00307	PRINTS:PR00380
PFscan:PS50021	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF456	SMART:SM00033	SMART:SM00129
SUPFAM:SSF47576	SUPFAM:SSF52540	UniParc:UPI0006ED9049	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:-:35018522..35026293

Molecular Weight (calculated)

111847.0 Da

IEP (calculated)

9.732

GRAVY (calculated)

-0.541

Length

1004 amino acids

Sequence
(BLAST)

0001: MEDGSRNRTH FNMASRKAEE SAWRRYEATQ WLESQVGPLG IPNQPTETEL ISCLRNGLIL CNAINKIHPG AVPKPLPAYQ YFENVRNFLF VMEELKLPAF
0101: EVSDLERDNL EMGSAAKLVD CILALKSFQE LKQMNKQNGY NKHIKSPLPM RMHSRAAAFS FDASRHLDLS ATLVKMPPAE NNFPKREAEI VELLAKQLVD
0201: LMFDAKENID GNIIASLHKE HLVADPIKVF NQIMACCNGE QPPTNFNELP LLLKDSVKEK GNLPPHSIST PTQSDALSAP DSSKHGEACL RKCKCNQVHL
0301: LDMQEKELLD LKALKLKIKK EFQEIQSQFQ GFFHDIGSQI QEMSTKALGY HKVVEENRKL YNMVQDLKGN IRVYCRIRPS FRAESKNVVD FIGEDGSLFI
0401: LDPTKTLKDG RKLFQFNQVF GPIAGQDDVY KDTQPLIRSV MDGYNVCIFA YGQTGSGKTY TMSGPSGGGT SKDMGINYLA LNDLFQMSNE RKDIISYDIY
0501: VQMVEIYNEQ EIRSCNDDGL SLPDAILHSV KSPTDVMTLI KLGEVNRAVS STAMNNRSSR SHSVLTVHVN GKDTSGSSIR SCLHLVDLAG SERVDKSEVT
0601: GERLKEAQFI NKSLSCLGDV ITALAQKNSH IPYRNSKLTL LLQDSLGGHA KTLMFAHVSP ESDSFGETMS TLKFAQRVST VELGAARMNK ESSEVMHLKE
0701: QVENLKIALA AKEAQRVTFQ RIKEPHTPSE KSTLVSEKTP LRPRRLSIEN CSAVKTDKPV NREDRGGVKS PLLLPRLRRL SLEGSKTIKR DSLLPKVSDN
0801: AVSKALQYER VSQQKYHPMQ DPESVSKLNG HFSSGNSRSE LHARTPQSPT SISYQTRLIK VNGGMQVHPL KLPKTPEPPV VDGGDAHGTK VMGSTNGKGS
0901: QIRRSLRTIG KLINGPDKRS QQNMVEVKSP VKGTGYTNHL VKSPISAVEK TKRRQSLTGI QPPLPNNSRR TSLGGKPVVA YDKDRNARTP PPSQSDSKTA
1001: KRWL

Best Arabidopsis Sequence Match ( AT3G10310.2 )
(BLAST)

001: MTTGLHEFNL ASRRAEEAAA RRFQAVQWLK SVVGQLGIPN QPSEKEFISC LRNGMILCNA INKIHPGAVS KVVENYSYLN GEYQLPPAYQ YFENVRNFLV
101: ALETLRLPGF EASDLEKDNL ESGSVTKVVD CILGLKAYHE CKLPSNGNGL YKHVKTPTFQ LSATKIHPTL SASKTSRHLD MSSVRERNDC TDGESDKLKG
201: IAKLFADHIF SSKENIDENL VSLENGSENS RANFEKILSR FPELQSVFKN LLSEGTLKPS DLKSMPLEEL PVHEEDQSSR SLSHKTKCNH KRLLKTQEKE
301: LAVLKNLFIK TKQDFKEFQV YLQRDLMELG NQMQEMSSAA QGYYKVVEEN RKLYNMVQDL KGNIRVYCRV RPIFNSEMDG VIDYIGKDGS LFVLDPSKPY
401: KDARKTFQFN QVFGPTATQD DVFRETQPLI RSVMDGYNVC IFAYGQTGSG KTYTMSGPPG RSATEMGINY LALSDLFLIC DRRKDMMTYE IYVQMVEIYN
501: EQVRDLLAEN SSCTRLDIRT CSSDDDGLSL PDATMHSVNS TKDVLQLMEA GEVNRAVSST SMNNRSSRSH SIFMVHVRGK DTSGGTLRSC LHLVDLAGSE
601: RVDKSEVTGD RLKEAQYINK SLSCLGDVIS ALAQKNSHIP YRNSKLTLLL QDSLGGQAKT LMFAHLSPEE DSFGETISTL KFAQRVSTVE LGAARAHKET
701: REVMHLKEQI ENLKRALGTE EWNNVSNGSK EIKSPFSRPI ATTERTPPRL RRLSIENCSS TKANLEDRRG IKSPLASRRA QILSLEGPMS CKNEENGKGD
801: PTMEVHQLKN PRSPLSSYQN RAVKVDGRTS IPQLQLLQTP VKGASRNDIQ MISVDSKTNG KGSHIRKSLR TIGKLINGSE KRKENIPADP RSPLGVANNF
901: SHIKSPDTSN AKTMRRQSLT GVMPPGQERS RRSSIGGKPI ENGVNVTDSR NAKTPPPMRS ASKIGKKWA

Arabidopsis Description

P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMT1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.