CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10687	Soybean	nucleus	96.25	96.12
KRH49904	Soybean	nucleus	75.84	77.0
KRH41997	Soybean	nucleus	75.47	76.33
Os07t0105700-01	Rice	cytosol	38.67	73.05
VIT_00s0532g00020.t01	Wine grape	cytosol	68.84	68.58
AT4G21270.1	Thale cress	cytosol	64.71	65.2
AT4G05190.1	Thale cress	cytosol, plastid	63.58	64.3
GSMUA_Achr6P19030_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	27.53	62.15
CDY39158	Canola	cytosol, plastid	61.45	61.92
Bra029564.1-P	Field mustard	cytosol, plastid	61.45	61.84
CDY46372	Canola	cytosol, plastid	61.33	61.71
GSMUA_Achr3P23070_001	Banana	nucleus	59.07	60.9
KRH33051	Soybean	cytosol	25.03	59.88
KRH22225	Soybean	cytosol	56.82	59.58
KRH27115	Soybean	cytosol	56.82	59.58
KRH55613	Soybean	cytosol	57.32	58.72
KRH33069	Soybean	cytosol	23.28	58.68
KRH25893	Soybean	cytosol	58.07	58.07
GSMUA_Achr10P...	Banana	cytosol	57.82	58.04
OQU88296	Sorghum	cytosol	50.94	57.16
GSMUA_Achr9P30130_001	Banana	cytosol, plastid	57.57	56.23
TraesCS2A01G344500.1	Wheat	cytosol	51.69	55.14
HORVU2Hr1G080240.1	Barley	cytosol	52.82	55.02
TraesCS2A01G480500.1	Wheat	cytosol, plastid	53.94	54.9
TraesCS2B01G505400.2	Wheat	cytosol, plastid	53.94	54.9
TraesCS2D01G479900.1	Wheat	cytosol, plastid	53.82	54.78
TraesCS2B01G342100.1	Wheat	cytosol	52.82	54.66
TraesCS2D01G322800.2	Wheat	cytosol	52.69	54.53
EES12911	Sorghum	cytosol	53.82	54.5
Zm00001d002186_P001	Maize	cytosol	52.82	54.31
Os04t0629700-02	Rice	cytosol	54.19	53.33
HORVU2Hr1G108010.5	Barley	cytosol, plastid	53.32	50.71
Zm00001d018624_P001	Maize	cytosol	50.69	48.97
KRH04655	Soybean	cytosol	19.52	27.86
KRH33944	Soybean	cytosol	22.65	23.18
KRG92857	Soybean	cytosol	22.4	23.01
KRG96836	Soybean	cytosol	23.28	22.46
KRH68554	Soybean	cytosol	23.15	22.26
KRH39191	Soybean	cytosol	24.28	21.04
KRH38546	Soybean	cytosol	13.89	19.82
KRH33856	Soybean	cytosol	24.03	19.45
KRH41185	Soybean	cytosol	26.16	19.32
KRH59901	Soybean	cytosol	26.16	19.24
KRH68465	Soybean	cytosol	24.53	19.23
KRG96746	Soybean	cytosol	24.66	19.22
KRH41631	Soybean	cytosol	24.78	18.79
KRH69263	Soybean	cytosol	23.53	18.69
KRH74459	Soybean	cytosol	24.53	18.46
KRH31841	Soybean	cytosol	23.28	18.38
KRG96486	Soybean	cytosol	23.15	18.34
KRH39483	Soybean	cytosol	24.41	18.28
KRH68226	Soybean	cytosol	23.03	17.88
KRH43838	Soybean	cytosol	23.4	17.88
KRH13631	Soybean	cytosol	22.9	17.55
KRH66897	Soybean	cytosol	22.03	17.53
KRG95233	Soybean	cytosol	22.65	17.49
KRH60336	Soybean	cytosol	27.03	17.43
KRH14189	Soybean	cytosol	24.66	17.31
KRH46431	Soybean	cytosol, plastid	24.03	16.84
KRG98432	Soybean	cytosol	23.9	16.77
KRH28979	Soybean	cytosol, plastid	26.28	16.55
KRH76479	Soybean	plastid	26.16	16.47
KRH39362	Soybean	cytosol	25.78	16.23
KRH07792	Soybean	cytosol	25.66	16.13
KRH73940	Soybean	cytosol	24.78	13.55
KRH12947	Soybean	cytosol	0.25	13.33

Protein Annotations

EntrezGene:100808278	MapMan:13.4.1.6	MapMan:20.1.3.12	Gene3D:3.40.850.10	EMBL:ACUP02008360	ncoils:Coil
EnsemblPlantsGene:GLYMA_13G251100	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0005871	GO:GO:0005874	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016787	GO:GO:0016887	UniProt:I1M2H1	InterPro:IPR001752	InterPro:IPR036961
EnsemblPlants:KRH21648	ProteinID:KRH21648	ProteinID:KRH21648.1	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom
InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067
PANTHER:PTHR24115	PANTHER:PTHR24115:SF464	SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI000233B64D	SEG:seg

Description

hypothetical protein

Coordinates

chr13:+:35830329..35836497

Molecular Weight (calculated)

89713.3 Da

IEP (calculated)

7.175

GRAVY (calculated)

-0.677

Length

799 amino acids

Sequence
(BLAST)

001: MASRIENRPP RSLSNKKGAT EEVFSDKRRR IGSERMERQG GRGRAPLGAL KADANDGAGA EGSECSTVDF TKEEVEALLM EKTNTKENRY DNKKKMDQMG
101: DLIKRLKLCV RWFKRVEEGY ILQKEKLQTD LQSAEKKCLD IENEMKIKIA ELDETISNLR VTISSLEERI AKEASDKLEA IACYGKEQEA RSAAEQMQAS
201: ISTELERVRE EKSTAERKAI SNEDLYKRSQ EYNMSLQQYN SRLQSDLEIT NEAHKRLETE KATIVENLSN VRGHNKALQD QLASLKASQD EAAKQKEMLT
301: NELKCLREEL KQIRDDRDRQ QLQVQTLMGD VEKYKEYTGK SCAQLDTLTI KTNALEGTCS SQRDQINMLQ QQLIAEREKS KMADLSASET RTVFEDQKRI
401: ICELQERLAE KEFQVIEGEK LRKKLHNTIL ELKGNIRVFC RVRPLLPDDG PGTDMVVSYP TSTEALGRGI ELLQSGQKYP FTFDKVFNHE ASQQDVFTEI
501: SQLVQSALDG YKVCIFAYGQ TGSGKTYTMM GRPDAPDLKG LIPRSLEQIF EISQSLKDQG WTFKMQASVL EIYNETLRDL LSSNRSSGID STRIENGVPV
601: SGKQPYTIMH DVNGNTHVSD LTIKNVSSAS EISSLLQQAA QSRSVGRTHM NEQSSRSHFV FTLRISGTNS NTDQQVQGVL NLIDLAGSER LSRSGATGDR
701: LKETQAINKS LSSLSDVIFA LAKKQEHVPF RNSKLTYLLQ PCLGGDSKTL MFVNISPDPS STGESLCSLR FAAGVNACEI GIPRRQTSTR SLDSRLSSG

Best Arabidopsis Sequence Match ( AT4G21270.1 )
(BLAST)

001: MASRNQNRPP RSPNAKKEGL GGISFDKRRK VETQGGTGRR QAFSAVNKQD VTMNSDVGSI EECGKVDFTK DEILALLSER AKAGKFDTKA KIEQMTDIIK
101: RLKVCVKWFQ QADETHVQEK ENLKVSLESS EQKYNHKELE ARTKEEELQA TISKLEENVV SLHEKLAKEE SSTQDAIECH RREKEARVAA EKVQASLGEE
201: LDKVKEEKMA AKQKVTSLED MYKRLQEYNT SLQQYNSKLQ TDLETVRAAL TRAEKEKSSI LENLSTLRGH SKSLQDQLSS SRVLQDDAIK QKDSLLSEVT
301: NLRNELQQVR DDRDRQVVQS QKLSEEIRKY QENVGKSSQE LDILTAKSGS LEETCSLQKE RLNMLEQQLA IANERQKMAD ASVSLTRTEF EEQKHLLCEL
401: QDRLADMEHQ LCEGELLRKK LHNTILELKG NIRVFCRVRP LLPDDGGRHE ATVIAYPTST EAQGRGVDLV QSGNKHPFTF DKVFNHEASQ EEVFFEISQL
501: VQSALDGYKV CIFAYGQTGS GKTYTMMGRP EAPDQKGLIP RSLEQIFQAS QSLGAQGWKY KMQVSMLEIY NETIRDLLST NRTTSMDLVR ADSGTSGKQY
601: TITHDVNGHT HVSDLTIFDV CSVGKISSLL QQAAQSRSVG KTQMNEQSSR SHFVFTMRIS GVNESTEQQV QGVLNLIDLA GSERLSKSGA TGDRLKETQA
701: INKSLSALSD VIFALAKKED HVPFRNSKLT YLLQPCLGGD SKTLMFVNIS PDPTSAGESL CSLRFAARVN ACEIGIPRRQ TSTKLLDSRL SYG

Arabidopsis Description

KIN14CKinesin-like protein KIN-14C [Source:UniProtKB/Swiss-Prot;Acc:Q07970]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.