CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39362	Soybean	cytosol	95.83	95.98
KRH76479	Soybean	plastid	80.72	80.85
KRH28979	Soybean	cytosol, plastid	80.33	80.46
VIT_04s0044g02020.t01	Wine grape	plastid	76.71	76.89
Bra005043.1-P	Field mustard	cytosol	9.28	74.68
PGSC0003DMT400024387	Potato	cytosol, plastid	74.11	74.47
Solyc02g068340.2.1	Tomato	nucleus	74.04	74.39
Os04t0666900-01	Rice	cytosol	67.51	71.38
GSMUA_Achr3P11630_001	Banana	cytosol	71.75	70.75
AT5G65930.3	Thale cress	cytosol	70.42	70.7
TraesCS2B01G514800.1	Wheat	cytosol	67.51	70.21
CDY18577	Canola	cytosol	69.55	69.88
CDX81427	Canola	cytosol	69.55	69.88
TraesCS2A01G487500.1	Wheat	cytosol	69.63	69.8
Bra037195.1-P	Field mustard	cytosol	69.39	69.78
GSMUA_Achr1P06170_001	Banana	cytosol, plastid	69.39	69.67
Zm00001d001928_P006	Maize	cytosol, plastid	69.39	69.34
EES13049	Sorghum	cytosol	69.32	69.32
TraesCS2D01G487700.1	Wheat	cytosol	69.47	69.04
CDY55105	Canola	cytosol	67.98	68.68
HORVU2Hr1G108840.1	Barley	plastid	69.0	68.57
Zm00001d026548_P049	Maize	cytosol	68.69	67.99
Bra031801.1-P	Field mustard	cytosol	68.06	67.53
CDY57771	Canola	cytosol, plastid	67.58	62.43
KRH04655	Soybean	cytosol	12.12	27.5
KRH27115	Soybean	cytosol	15.81	26.38
KRH55613	Soybean	cytosol	16.13	26.28
KRH22225	Soybean	cytosol	15.74	26.25
KRH21648	Soybean	nucleus	16.13	25.66
KRH25893	Soybean	cytosol	16.13	25.66
KRH33069	Soybean	cytosol	6.37	25.55
KRH10687	Soybean	nucleus	15.89	25.25
KRH33051	Soybean	cytosol	6.53	24.85
KRH41997	Soybean	nucleus	15.42	24.81
KRH49904	Soybean	nucleus	15.11	24.4
KRG92857	Soybean	cytosol	14.16	23.14
KRH33944	Soybean	cytosol	13.77	22.41
KRG96836	Soybean	cytosol	14.08	21.62
KRH68554	Soybean	cytosol	14.08	21.54
KRH43838	Soybean	cytosol	16.6	20.17
KRH13631	Soybean	cytosol	16.29	19.85
KRH38546	Soybean	cytosol	8.73	19.82
KRH74459	Soybean	cytosol	16.44	19.68
KRH68465	Soybean	cytosol	15.66	19.53
KRG96746	Soybean	cytosol	15.66	19.41
KRH39483	Soybean	cytosol	16.29	19.4
KRH33856	Soybean	cytosol	14.71	18.95
KRH69263	Soybean	cytosol	14.79	18.69
KRH31841	Soybean	cytosol	14.87	18.68
KRG96486	Soybean	cytosol	14.79	18.63
KRH68226	Soybean	cytosol	14.95	18.46
KRH39191	Soybean	cytosol	12.98	17.9
KRH59901	Soybean	cytosol	15.26	17.86
KRH14189	Soybean	cytosol	15.97	17.84
KRH66897	Soybean	cytosol	14.08	17.83
KRH41185	Soybean	cytosol	15.03	17.65
KRG95233	Soybean	cytosol	14.08	17.29
KRH46431	Soybean	cytosol, plastid	15.34	17.11
KRG98432	Soybean	cytosol	15.18	16.94
KRH41631	Soybean	cytosol	13.45	16.22
KRH60336	Soybean	cytosol	15.26	15.66
KRH73940	Soybean	cytosol	16.05	13.96
KRH12947	Soybean	cytosol	0.08	6.67

Protein Annotations

Gene3D:1.20.80.10	Gene3D:1.25.40.530	EntrezGene:100810661	Gene3D:2.30.29.30	MapMan:20.1.3.12	Gene3D:3.10.20.90
Gene3D:3.40.850.10	EMBL:ACUP02010108	InterPro:Band_41_domain	ncoils:Coil	InterPro:FERM/acyl-CoA-bd_prot_sf	InterPro:FERM_2
InterPro:FERM_N	InterPro:FERM_central	InterPro:FERM_domain	EnsemblPlantsGene:GLYMA_16G111200	GO:GO:0000166	GO:GO:0003674
GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005871	GO:GO:0007018
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	GO:GO:0016887	UniProt:I1MMS6
InterPro:IPR000299	InterPro:IPR000857	InterPro:IPR001752	InterPro:IPR011993	InterPro:IPR014352	InterPro:IPR036961
InterPro:IPR038185	ProteinID:KRH07791.1	EnsemblPlants:KRH07792	ProteinID:KRH07792	ProteinID:KRH07792.1	ProteinID:KRH07793.1
InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:MyTH4_dom	InterPro:MyTH4_dom_sf
InterPro:P-loop_NTPase	PFAM:PF00225	PFAM:PF00373	PFAM:PF00784	PFAM:PF09379	InterPro:PH-like_dom_sf
PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50057	PFscan:PS50067	PFscan:PS51016	PANTHER:PTHR24115
PANTHER:PTHR24115:SF162	SMART:SM00129	SMART:SM00139	SMART:SM00295	SUPFAM:SSF47031	SUPFAM:SSF50729
SUPFAM:SSF52540	UniParc:UPI000233B61C	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr16:+:24455709..24466232

Molecular Weight (calculated)

143751.0 Da

IEP (calculated)

6.808

GRAVY (calculated)

-0.474

Length

1271 amino acids

Sequence
(BLAST)

0001: MITDVPPSMT QNGRSSRYSF GSSNGNGDTP AQNGSAVINV DDYDSDSSNF APSTPSTMSM AVPAELGGAV PLINRFQVDG FLKLMQKQIQ SAGKHGFFSK
0101: RSVGPQVREK VTFEDMLSFQ KDPIPTSLLK LNVDFVSRAT KLFQIILKYM GIDPSDRVTP ISLDERVELV GKLYKQSLKR PELRDELFVQ ISKQTRNNPE
0201: RQYLIKAWEL MYLCASSMSP SKDISSYLSE YIHNIANGVA TDSEIQVLAL NTLNALKHSV KAGPRHIIPG REEIEALLTG RKLTTIVFFL DETFEEITYD
0301: MSTTVANAVE ELAGLIKLST YSSFSLFECR KVVTGSKAPD LGNEEYIGLD ANKYIGDLLA EFKAAKDRSK GEILHCKLIF KKKLFRESDE AVTEPMFVQL
0401: SYVQMQHDYI LGNYPVGRDD AAQLSALQIL AEIGFLSTPE SCIDWNSLLE RFLPRQISMT RAKREWEYDI LSRYRSLENL TKDDARQQFL RILRALPYGN
0501: SVFFNVRKID DPIGLLPGRI ILGINKRGIH FFRPVPKEYL HSAELRDIMQ FGSSNTAVFF KMRVAGVLHI FQFETKQGEE ICVALQTHIN DVMLRRYSKA
0601: RSAAGGGSGS LNGDISNNSK TPNMELYEKR VQELSKHIEE SKKNADQLLE ELRVKQKQEE KMQEELDDLK ESLKANKQNL DAVTSDRDSL VSLCNEKDKE
0701: LQAAILDKRN MESRMAKLNN AVIENTAKKD LANAGNRQVT QKLEDELKVC KYELLSANET IESLKSEKLI LEQKLSALEK RNAGEISSLK WKLEQERKVV
0801: KSEAYELERR LEGCRQELLT AKAIISVKDS EFDALQNNLK ELEELREMKE DIDRKNEQTA AILKIQGAQL AEMESLYKEE QVLRKRYFNV IEDMKGKIRV
0901: YCRLRPLSEK EIVEKEREVL TAVDEFTVEY PWKDEKLKQY IYDRVFDANA TQESVFEDTK YLVQSAVDGY NVCIFAYGQT GSGKTFTIYG SDINPGLTPR
1001: AIAELFRILR RDNNKYSFSL KAYMVELYQD TLIDLLLPKN GKPLKLDIKK DSTGMVVVEN VTVMSISTIE ELNSIIQRGS ERRHISGTQM NDESSRSHLI
1101: LSIVIESTNL QSQSVAKGKL SFVDLAGSER VKKSGSTGSQ LKEAQSINKS LSALGDVISS LSSGGQHTPY RNHKLTMLMS DSLGGNAKTL MFVNVAPTES
1201: NLDETNNSLM YASRVRSIVN DPNKNVSSKE VARLKKLVAY WKQQAGRTLE YDDLEEIQDE RPTKENGNGN R

Best Arabidopsis Sequence Match ( AT1G09170.2 )
(BLAST)

001: MATEQQDSQL CLATILEDFL KQRNIQVSVG VDSSSLKKAD ETFGGRDLPV DPSDLRRYEA ARWVRNTLGV VGGRDLPADP SEEDFRIALR SGILLCNVLN
101: RVKPGAVPKV VEAPNDPLVN QDGAALSAFQ YFENLRNFLV FVEEMGIPTF EVSDFEKGGK SARIVECVLA LKSYREWKQS GGSGTWRYIL NSKPTTFGIA
201: KQYKRKDSEV PVDAVTNSPS STPSSEQPLL DQSDSNTKND GTASSIDAIV RAVFSDMKQE DIPVIVEDML KSVMVEYERR LATQNELLLM SAGNRDKLGS
301: GDLGRTISGN EETLSDASYG EENVTEIVNN NMEASQDSNV EELENQDYEL YAISKEKTEK QQLIIERQQT HTEELKHDLK AVKAGLSLLQ MKYQQEFTSL
401: GKHLHGLTYA ATGYQRVLEE NRKLYNQVQD LKGSIRVYCR VRPFLPGQKS VLTTVDHLED STLSIATPSK YGKEGQKTFT FNKVFGPSAS QEAVFADTQP
501: LIRSVLDGYN VCIFAYGQTG SGKTFTMMGP NELTDETLGV NYRALSDLFH LSSVRKETFS YNISVQMLEI YNEQVRDLLA TNGQTSRLEI RNSTQDGINV
601: PEATLVPVST TSDVIHLMNI GQKNRAVSAT AMNDRSSRSH SCLTVHVQGK DLTSGVTLRG SMHLVDLAGS ERIDKSEVTG DRLKEAQHIN KSLSALGDVI
701: ASLSQKNNHI PYRNSKLTQL LQDALGGQAK TLMFIHISPE LEDLGETLST LKFAERVATV DLGAARVNKD TSEVKELKEQ IASLKLALAR KESGADQTQL
801: QRPLTPDKLL RKKSLGVSSS FSKSANSTRQ VQTKHKPSQI DDVNSIEVKG TRKLIHQTKQ IKLVNTFCSD YFMMCSEITC RVKVTLHLAL TYKD

Arabidopsis Description

P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain [Source:TAIR;Acc:AT1G09170]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.