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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 3
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:cytosol
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
YLoc:cytosol
plasma membrane: 18260611
plasma membrane: 27800704
plasma membrane: 28056797
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
msms PMID: 18260611 doi
SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic
Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G268300.1 Wheat cytosol 93.53 28.56
TraesCS4B01G045900.1 Wheat cytosol 93.53 28.55
HORVU4Hr1G007450.5 Barley cytosol 93.53 28.53
TraesCS4D01G046100.1 Wheat cytosol 93.36 28.5
KXG37740 Sorghum cytosol 90.97 27.63
Zm00001d013442_P061 Maize cytosol 91.31 27.35
Bra018885.1-P Field mustard cytosol 77.85 26.59
CDY22817 Canola cytosol 77.17 26.25
GSMUA_Achr1P22400_001 Banana cytosol 82.45 24.54
CDY29353 Canola cytosol 80.75 24.3
CDY64591 Canola cytosol 80.58 24.24
CDY25197 Canola cytosol 76.66 24.17
CDY48864 Canola cytosol 79.9 24.09
Bra032281.1-P Field mustard cytosol 80.58 23.56
KRH60863 Soybean cytosol 81.26 23.44
Bra018786.1-P Field mustard cytosol 80.07 23.18
AT1G49340.2 Thale cress cytosol 80.07 23.18
VIT_03s0063g02260.t01 Wine grape cytosol 78.53 22.66
KRH51547 Soybean nucleus 64.05 19.53
Os05t0180600-02 Rice cytosol 20.1 14.5
Os08t0307400-02 Rice cytosol 19.93 14.15
Solyc11g043130.1.1 Tomato nucleus 5.28 2.11
Os11t0209700-02 Rice plasma membrane 0.85 1.09
CDY48094 Canola cytosol 2.21 0.97
Protein Annotations
Gene3D:1.10.1070.11Gene3D:1.25.40.70MapMan:27.5.2.1Gene3D:3.30.1010.10UniProt:A0A0P0W249InterPro:ARM-type_fold
ProteinID:BAS86020.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004430GO:GO:0004672
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0006629GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016043GO:GO:0016301
GO:GO:0016310GO:GO:0016740GO:GO:0019538GO:GO:0030036GO:GO:0046854GO:GO:0048015
InterPro:IPR000403InterPro:IPR001263InterPro:IPR036940InterPro:Kinase-like_dom_sfEnsemblPlantsGene:Os03g0711200EnsemblPlants:Os03t0711200-01
PFAM:PF00454PFAM:PF00613InterPro:PI3/4_kinase_CSInterPro:PI3/4_kinase_cat_domInterPro:PI3/4_kinase_cat_sfInterPro:PI_Kinase
InterPro:PInositide-3_kin_accessory_domScanProsite:PS00915PFscan:PS50290PFscan:PS51545PANTHER:PTHR10048PANTHER:PTHR10048:SF15
SMART:SM00145SMART:SM00146SUPFAM:SSF48371SUPFAM:SSF56112UniParc:UPI000393A63FSEG:seg
Description
Similar to Phosphatidylinositol 4-kinase. (Os03t0711200-01)
Coordinates
chr3:-:28690392..28695611
Molecular Weight (calculated)
65950.5 Da
IEP (calculated)
6.288
GRAVY (calculated)
-0.158
Length
587 amino acids
Sequence
(BLAST)
001: RKQLLLMLSQ NEADRLEVWA QPINTKDAAT FRGKISSDKW IDHARTAFAV DPRIAFSMIM RFPTNSALSS EITQLVQTHI LELRTIPEAL PFFITPKAVD
101: ENSSLLQQLP HWAPCSVTQA LEFLTPPYKG HPRVMAYVLR VLETYPPETV TFFMPQLVQS LRYDDDKLVE GYLLGAARRS NIFAHILIWH LQGECVPDEP
201: GKEAAAPKAT AFHSLLPAVR EKIVDGFTPE ARDMFEREFE FFDKVTSISG VLFPLPKEER RAGIKRELEK ITVPGDDLYL PTATNKFVRG IQVDSGIPLQ
301: SAAKVPIMIT FNVVDRDGDP NDVKPQACIF KVGDDCRQDV LALQVIALLR DIFQAVGLNL YLFPYGVLPT GPERGIIEVV PNTRSRNQMG ETTDGGLLEI
401: FQQDYGPVGS PSFEAAREMF MISSAGYAVA SLLLQPKDRH NGNLLFDSHG RLVHIDFGFI LEISPGGNMG FESAHFKLSH EMTQLLDPSG TMKSDTWNQF
501: LRLCVKGYLA GRRHMNGIIT TVNLMVDSGL PCFSRGEPIA NLRKRFHPEM NEREAANFMV RTCVDAYNKW TTAGYDLIQY LQQGIEK
Best Arabidopsis Sequence Match ( AT1G49340.3 )
(BLAST)
0001: MEALTELCDI IAKNPKQFSE KLAWICGRCP QTEWLLAESP RVSRSHLNAV LAVARIISKN PESIDNRAKS VVNEFLSAIP ASFRRSFWPH SFPSQLISSF
0101: YCDFLSYLSC AADLSPEFGT EVARFTGEVV IAAIAPSSGD SDGDPAISKA FLVALSQHFP SILQSDGDKL ITMLLDQFVL NRAPASPKEQ RQQNSANSET
0201: DTSSSQGSPI STNRYPSGKT EMASPGDEVA SHGSNLSSKS SSSVVMNGGS IVWKSGVDQL SFGFSEGSGG ANPVFRQQVA SFEDESIESL EKQEIAFRLI
0301: THILDKVKID SKLQDQVRFI AKRQLQSMSA FLKSRKRDWN EQGQVLKTRV NAKLSVYQAA AKMKIKSLVS LETDGKTSKR LVLETLALLL DAADACLTSV
0401: WRKMKACEEL FDSLLSGIAK IAVARGGQPL RVLLIRLKPL PDQGAMLESI FKTSCVIIES AWAKDRAPVD NFIMGLASSI RERNDYEEQV DREKQVPAVQ
0501: LNVIRLLADL NVAVKKPEVA DMILPLFIES LEEGDASTPS FLRLQLLDAV SRIATLGFDK SYRETVVLMT RSYLSKLSSV GSVESKTSAP EATTERVETL
0601: PAGFLTIASG LMDTKLRSDY RHRLLSLCSD VGLAAESKSG GSGVDFLGPL LPAVAEICSD FDPTMDVEPS LLKLFRNLWF YIALFGLAPP IVKTPTPPLK
0701: STSNSVNSVG SMSATALQAV GGPYMWDNQW ALAVQRIAQG TPPLVVSSVK WLEDELELNA LHNPGSRRGN GNEKVASTQR LALSTALGGR VDVAAMNTIS
0801: GVKATYLLAV AFLEIIRFIS NGGILNGESS VSASRSAFSC VFEYLKTPNL TPAVSQCLTA IVHRAFETAV SWLEDRISLT GKDARNRELT TYAHACFLIK
0901: SMSQRDEHVR DISVNLLTQL RDKFPQVLWH SSCLDSLLFS VHDNTPSTVV NDPAWTAAVR SLYQKVVREW IIISLSYAPC TSQGLLQDKL CKANTWQRAQ
1001: TTTDVVSLLS EIKIGTGKNE LWSGIRTANI PAVMAAAAAA SGANLKVSEA FNLEVLGTGV VSATVKCNHA GEIAGMRRLY NSIGGFQSGS TPSGFGGGLQ
1101: RLISGAFSQA PQPEDDSFNE MLIARFVRLL QQFVNTAEKG GEVEKSQFRE TCSQATALLL SNLGGESKTN VEGFSQLLRL LCWCPAYIST PDAMETGIFI
1201: WTWLVSAAPQ LVSLVLAELV DAWIWTIDTK RGLFASDVRY SGPAAKLRPH LSPGEPEDPP ESDPVDQIVA HRLWLGFLID RFEVVRHNSA EQLLLLGRML
1301: QRSTDLEWCF TRHPAAAGTF FSLMLLGLKF CSCQTQGNMQ KFRSGLQLLE DRIYRTSLGW FAHQPEWYDV NIPNFCHSEA LSVSVFVHFL SNELSESSQS
1401: DSKGKPRESG NLIDVTDQYH PVWGEMDNYT LGKEKRKQLL LMLCQHEADR LDVWAQPISS KDSPYSRLKI SSEKWTEYAK TAFSVDPRIA LSVASRFPAN
1501: ASVKSEVTQL VQTNIVDLRT IPEALPYFVT PKNVEENSVL LQQLPHWAAC SITQALEFLT PAYKGHPRVM AYVLRVLESY PPERVTFFMP QLVQSLRYDD
1601: GRLVEGYLLR ATQRSDIFAH ILIWHLQGED VQETPKDGSI DKNAAFQEIL PQVRQHIIDG FSPNALDMFT REFDFFDKVT SISGVLFPLP KEERRAGIRR
1701: ELEKIEMQGD DLYLPTAPNK LVRGIRVDSG IPLQSAAKVP IMITFNVIDR DGDHSDVKPQ ACIFKVGDDC RQDVLALQVI SLLRDIFQAA GLNLYLFPYG
1801: VLPTGAERGI IEVVPNTRSR SQMGETTDGG LYEIFQQDYG PVGSTTFETA RENFLISSAG YAVASLLLQP KDRHNGNLLF DDVGRLVHID FGFILETSPG
1901: GNMRFESAHF KLSHEMTQLL DPSGVMKSKT WHQFVSLCVK GYLAARRQMD GIISTVQMML ESGLPCFSRG DPIGNLRKRF HPEMSEREAA HFMIHVCTDA
2001: YNKWTTAGYD LIQYLQQGIE K
Arabidopsis Description
PI4KA1Phosphatidylinositol 4-kinase alpha 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXA1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.