Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- nucleus 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0553700-01 | Rice | plasma membrane | 13.83 | 9.7 |
| Os09t0359700-00 | Rice | cytosol | 9.57 | 8.29 |
Protein Annotations
| MapMan:12.2.3 | Gene3D:2.60.40.1490 | EntrezGene:4339550 | ProteinID:AAT58727.1 | EMBL:AK103746 | InterPro:ASF1-like |
| InterPro:ASF1-like_sf | ProteinID:BAF18179.1 | ProteinID:BAS95243.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006333 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | InterPro:IPR036747 |
| EnsemblPlantsGene:Os05g0553800 | EnsemblPlants:Os05t0553800-01 | PFAM:PF04729 | PANTHER:PTHR12040 | PANTHER:PTHR12040:SF0 | UniProt:Q6I632 |
| SUPFAM:SSF101546 | UniParc:UPI00003B338D | RefSeq:XP_015639753.1 | : | : | : |
Description
Similar to Anti-silencing protein-like (Anti-silencing function 1b) (Anti- silencing factor 1-like protein). (Os05t0553800-01);Hypothetical conserved gene. (Os05t0553800-02)
Coordinates
chr5:+:27534280..27537659
Molecular Weight (calculated)
21106.6 Da
IEP (calculated)
3.991
GRAVY (calculated)
-0.479
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAVNITNVA VLDNPTAFLN PFQFEISYEC LIPLDDDLEW KLIYVGSAED ENYDQQLESV LVGPVNVGTY RFVLQADPPD PSKIREEDII GVTVLLLTCS
101: YMGQEFMRVG YYVNNDYDDE QLREEPPAKL LIDRVQRNIL ADKPRVTKFP INFHPEPSTS AGQQQQEPQT ASPENHTGGE GSKPAADQ
101: YMGQEFMRVG YYVNNDYDDE QLREEPPAKL LIDRVQRNIL ADKPRVTKFP INFHPEPSTS AGQQQQEPQT ASPENHTGGE GSKPAADQ
001: MSSINITNVT VLDNPAPFVN PFQFEISYEC LTSLKDDLEW KLIYVGSAED ETYDQVLESV LVGPVNVGNY RFVLQADSPD PLKIREEDII GVTVLLLTCS
101: YMDQEFIRVG YYVNNDYDDE QLREEPPTKV LIDKVQRNIL TDKPRVTKFP INFHPENEQT LGDGPAPTEP FADSVVNGEA PVFLEQPQKL QEIEQFDDSD
201: VNGEAIALLD QPQNLQET
101: YMDQEFIRVG YYVNNDYDDE QLREEPPTKV LIDKVQRNIL TDKPRVTKFP INFHPENEQT LGDGPAPTEP FADSVVNGEA PVFLEQPQKL QEIEQFDDSD
201: VNGEAIALLD QPQNLQET
Arabidopsis Description
ASF1BHistone chaperone ASF1B [Source:UniProtKB/Swiss-Prot;Acc:Q9LS09]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.