Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 1
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0554050-01 | Rice | golgi | 44.19 | 3.18 |
| Os04t0563000-01 | Rice | endoplasmic reticulum, golgi | 16.28 | 1.27 |
| Os03t0169000-01 | Rice | endoplasmic reticulum, golgi, vacuole | 2.33 | 0.21 |
| Os03t0328100-01 | Rice | mitochondrion | 2.33 | 0.2 |
| Os09t0442900-01 | Rice | cytosol, plasma membrane, plastid | 2.33 | 0.16 |
| Os01t0168600-01 | Rice | mitochondrion | 0.0 | 0.0 |
| Os01t0851100-02 | Rice | plastid | 0.0 | 0.0 |
| Os02t0726500-01 | Rice | golgi, mitochondrion, peroxisome, plastid | 0.0 | 0.0 |
| Os03t0390600-02 | Rice | nucleus | 0.0 | 0.0 |
| Os04t0551300-01 | Rice | cytosol, golgi, mitochondrion, plastid | 0.0 | 0.0 |
| Os05t0451900-01 | Rice | cytosol | 0.0 | 0.0 |
| Os06t0219400-00 | Rice | mitochondrion | 0.0 | 0.0 |
| Os06t0284200-02 | Rice | mitochondrion | 0.0 | 0.0 |
| Os12t0190100-01 | Rice | golgi, mitochondrion, plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os09t0548100-01 | EnsemblPlantsGene:Os09g0548100 | ProteinID:BAH94697.1 | ProteinID:BAT09271.1 | UniParc:UPI0001B66067 | UniProt:C7J762 |
| MapMan:35.2 | : | : | : | : | : |
Description
F-box protein 502Conserved hypothetical protein. (Os09t0548100-01)
Coordinates
chr9:+:21673765..21674236
Molecular Weight (calculated)
4712.1 Da
IEP (calculated)
3.228
GRAVY (calculated)
-0.888
Length
43 amino acids
Sequence
(BLAST)
(BLAST)
1: DEEADRPDTE DDPSGIGEMI DMEAEDDSLA SRVDSVLEEI LSD
0001: MHEKDDLPQD SIADGIENDD ESNGQEEEEL DPDQGTAFVD SKEDMFVDAP EELNFDTPSK EALTTDDDDN DDLGTHFNIE KGDWEKELAG LQEQFKLLTG
0101: ENDLTGEDGN TTVDIVSRFS KFLKTAKEER IQHEVALKEL HGVISGRDDE IADLTTKISE LSSSQPVSEM GDQAQNLEHL EAATDRIMVS LSNVFGEGEL
0201: QYGSSISEKL AHLENRVSFL GAKYTEFYYG ADQLRKCLAS DVLDLSFQED FGSALGAACS ELFELKQKEA AFFERLSHLE DENRNFVEQV NREKEMCESM
0301: RTEFEKLKAE LELEKTKCTN TKEKLSMAVT KGKALVQNRD ALKHQLSEKT TELANRLTEL QEKEIALESS EVMKGQLEQS LTEKTDELEK CYAELNDRSV
0401: SLEAYELTKK ELEQSLAEKT KELEECLTKL QEMSTALDQS ELDKGELAKS DAMVASYQEM LSVRNSIIEN IETILSNIYT PEEGHSFDIV EKVRSLAEER
0501: KELTNVSQEY NRLKDLIVSI DLPEEMSQSS LESRLAWLRE SFLQGKDEVN ALQNRIESVS MSLSAEMEEK SNIRKELDDL SFSLKKMEET AERGSLEREE
0601: IVRRLVETSG LMTEGVEDHT SSDINLLVDR SFDKIEKQIR DSSDSSYGNE EIFEAFQSLL YVRDLEFSLC KEMLGEGELI SFQVSNLSDE LKIASQELAF
0701: VKEEKIALEK DLERSEEKSA LLRDKLSMAI KKGKGLVQDR EKFKTQLDEK KSEIEKLMLE LQQLGGTVDG YKNQIDMLSR DLERTKELET ELVATKEERD
0801: QLQQSLSLID TLLQKVMKSV EIIALPVDLA SEDPSEKIDR LAGYIQEVQL ARVEEQEEIE KVKSEVDALT SKLAETQTAL KLVEDALSTA EDNISRLTEE
0901: NRNVQAAKEN AELELQKAVA DASSVASELD EVLATKSTLE AALMQAERNI SDIISEKEEA QGRTATAEME QEMLQKEASI QKNKLTEAHS TINSLEETLA
1001: QTESNMDSLS KQIEDDKVLT TSLKNELEKL KIEAEFERNK MAEASLTIVS HEEALMKAEN SLSALQGEMV KAEGEISTLS SKLNVCMEEL AGSSGNSQSK
1101: SLEIITHLDN LQMLLKDGGL ISKVNEFLQR KFKSLRDVDV IARDITRNIG ENGLLAGEMG NAEVTAVLLI TLLYFQDDST EAKSLLSDLD NSVNTEPENS
1201: QGSAADEDEI SSSLRKMAEG VRLRNKTLEN NFEGFSTSID TLIATLMQNM TAARADVLNI VGHNSSLEEQ VRSVENIVRE QENTISALQK DLSSLISACG
1301: AAARELQLEV KNNLLELVQF QENENGGEME STEDPQELHV SECAQRIKEL SSAAEKACAT LKLFETTNNA AATVIRDMEN RLTEASVALE KAVLERDLNQ
1401: TKVSSSEAKV ESLEELCQDL KLQVKEEKWH EKEVELSTLY DKLLVQEQGN FYLLLSLISL NLHHIITTIL KCHVLLLRIA EAKENLIPAS DMRTLFDKIN
1501: GIEVPSVDLV NGLDPQSPYD VKKLFAIVDS VTEMQHQIDI LSYGQKELNS TLAEKDLEIQ GLKKATEAES TTELELVKAK NELSKLISGL EKLLGILASN
1601: NPVVDPNFSE SWTLVQALEK KITSLLLESE SSKSRAQELG LKLAGSEKLV DKLSLRVKEF EEKLQTKAIQ PDIVQERSIF ETPRAPSTSE ISEIEDKGAL
1701: GIKSISPVPT AAQVRTVRKG STDHLSINID SESEHLMNNN ETDEDKGHVF KSLNMSGLIP TQGKIIADRV DGIWVSGGRV LMSRPQARLG VMVYSLLLHL
1801: WLLASIL
0101: ENDLTGEDGN TTVDIVSRFS KFLKTAKEER IQHEVALKEL HGVISGRDDE IADLTTKISE LSSSQPVSEM GDQAQNLEHL EAATDRIMVS LSNVFGEGEL
0201: QYGSSISEKL AHLENRVSFL GAKYTEFYYG ADQLRKCLAS DVLDLSFQED FGSALGAACS ELFELKQKEA AFFERLSHLE DENRNFVEQV NREKEMCESM
0301: RTEFEKLKAE LELEKTKCTN TKEKLSMAVT KGKALVQNRD ALKHQLSEKT TELANRLTEL QEKEIALESS EVMKGQLEQS LTEKTDELEK CYAELNDRSV
0401: SLEAYELTKK ELEQSLAEKT KELEECLTKL QEMSTALDQS ELDKGELAKS DAMVASYQEM LSVRNSIIEN IETILSNIYT PEEGHSFDIV EKVRSLAEER
0501: KELTNVSQEY NRLKDLIVSI DLPEEMSQSS LESRLAWLRE SFLQGKDEVN ALQNRIESVS MSLSAEMEEK SNIRKELDDL SFSLKKMEET AERGSLEREE
0601: IVRRLVETSG LMTEGVEDHT SSDINLLVDR SFDKIEKQIR DSSDSSYGNE EIFEAFQSLL YVRDLEFSLC KEMLGEGELI SFQVSNLSDE LKIASQELAF
0701: VKEEKIALEK DLERSEEKSA LLRDKLSMAI KKGKGLVQDR EKFKTQLDEK KSEIEKLMLE LQQLGGTVDG YKNQIDMLSR DLERTKELET ELVATKEERD
0801: QLQQSLSLID TLLQKVMKSV EIIALPVDLA SEDPSEKIDR LAGYIQEVQL ARVEEQEEIE KVKSEVDALT SKLAETQTAL KLVEDALSTA EDNISRLTEE
0901: NRNVQAAKEN AELELQKAVA DASSVASELD EVLATKSTLE AALMQAERNI SDIISEKEEA QGRTATAEME QEMLQKEASI QKNKLTEAHS TINSLEETLA
1001: QTESNMDSLS KQIEDDKVLT TSLKNELEKL KIEAEFERNK MAEASLTIVS HEEALMKAEN SLSALQGEMV KAEGEISTLS SKLNVCMEEL AGSSGNSQSK
1101: SLEIITHLDN LQMLLKDGGL ISKVNEFLQR KFKSLRDVDV IARDITRNIG ENGLLAGEMG NAEVTAVLLI TLLYFQDDST EAKSLLSDLD NSVNTEPENS
1201: QGSAADEDEI SSSLRKMAEG VRLRNKTLEN NFEGFSTSID TLIATLMQNM TAARADVLNI VGHNSSLEEQ VRSVENIVRE QENTISALQK DLSSLISACG
1301: AAARELQLEV KNNLLELVQF QENENGGEME STEDPQELHV SECAQRIKEL SSAAEKACAT LKLFETTNNA AATVIRDMEN RLTEASVALE KAVLERDLNQ
1401: TKVSSSEAKV ESLEELCQDL KLQVKEEKWH EKEVELSTLY DKLLVQEQGN FYLLLSLISL NLHHIITTIL KCHVLLLRIA EAKENLIPAS DMRTLFDKIN
1501: GIEVPSVDLV NGLDPQSPYD VKKLFAIVDS VTEMQHQIDI LSYGQKELNS TLAEKDLEIQ GLKKATEAES TTELELVKAK NELSKLISGL EKLLGILASN
1601: NPVVDPNFSE SWTLVQALEK KITSLLLESE SSKSRAQELG LKLAGSEKLV DKLSLRVKEF EEKLQTKAIQ PDIVQERSIF ETPRAPSTSE ISEIEDKGAL
1701: GIKSISPVPT AAQVRTVRKG STDHLSINID SESEHLMNNN ETDEDKGHVF KSLNMSGLIP TQGKIIADRV DGIWVSGGRV LMSRPQARLG VMVYSLLLHL
1801: WLLASIL
Arabidopsis Description
TGN-related, localized SYP41 interacting protein [Source:UniProtKB/TrEMBL;Acc:F4I9A1]
SUBAcon: [cytosol,nucleus,golgi]
SUBAcon: [cytosol,nucleus,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.