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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 9
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:plasma membrane
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os11t0102900-01 Rice plasma membrane 99.35 99.03
TraesCS5B01G154600.2 Wheat plasma membrane 82.19 82.1
TraesCS5D01G161800.1 Wheat plasma membrane 82.19 82.1
TraesCS5A01G156400.2 Wheat plasma membrane 81.98 81.89
HORVU5Hr1G048950.2 Barley plasma membrane 81.98 81.8
EES09072 Sorghum plasma membrane 83.06 81.47
KXG22750 Sorghum plasma membrane 82.3 81.42
Zm00001d052306_P004 Maize plasma membrane 79.48 80.0
GSMUA_Achr8P17390_001 Banana cytosol 51.79 69.43
GSMUA_Achr6P34450_001 Banana plasma membrane, vacuole 67.21 67.43
Solyc12g039080.1.1 Tomato cytosol 19.0 59.12
HORVU2Hr1G048130.1 Barley mitochondrion 10.97 36.46
Os09t0358000-00 Rice cytosol 5.21 34.78
Os01t0976900-00 Rice mitochondrion 24.21 33.79
Os07t0568100-01 Rice plasma membrane 19.33 30.9
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.1Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:4351245ProteinID:ABA95578.2
EMBL:AK101189ProteinID:BAT15458.1ProteinID:EEE52591.1GO:GO:0000166GO:GO:0003674GO:GO:0003676
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538InterPro:IPR000719
InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfInterPro:Malectin-like_Carb-bd_domEnsemblPlantsGene:Os12g0102500EnsemblPlants:Os12t0102500-01
PFAM:PF00069PFAM:PF12819ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27003
PANTHER:PTHR27003:SF141InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSUniProt:Q2QYY2SMART:SM00220SUPFAM:SSF52058
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0000D89BCBRefSeq:XP_015619671.1
RefSeq:XP_015619672.1SEG:seg::::
Description
Serine/threonine protein kinase-related domain containing protein. (Os12t0102500-01);Serine/threonine protein kinase-related domain containing protein. (Os12t0102500-02)
Coordinates
chr12:-:112744..120226
Molecular Weight (calculated)
101949.0 Da
IEP (calculated)
5.396
GRAVY (calculated)
-0.177
Length
921 amino acids
Sequence
(BLAST)
001: MPSASAALVL LFVAFSLSNA QPGFISLDCG GDDDYTDGIG IQWTSDAKFV SAGQKANLLL QNQQLQQYTT VRSFPADNRK YCYTMNVRNR TRYLVRATFL
101: YGNFDNSNVY PKFDLSLGPT PWTTVVIDDA TTPVVQEAII LAAAPTLSVC LSNASTGQPF ISTLELRQFN GSLYYTTDEK QFFLRLSARI NFGAESNASV
201: RYPDDPFDRI WESDLVRRAN YLVDVAPGTE RISTTKPIFV STNEEPPQRV MQTAVVGKNG SLTYRIDLED FPGNAWGVSY FAEIEDLTPN QTRKFKLVIP
301: GKPEFSKPTV DVEENAQGKY RLYEPGYTNI PLPFVFSFGF KKTNDSSEGP ILNAMEIYKY IEISVGSQDA NIMASLVSRY PEAGWAQEGG DPCLPASWSW
401: VQCSSEAAPR IFSISLSGKN ITGSIPVELT KLSGLVELKL DGNSFTGQIP DFTGCHDLQY IHLEDNQLTG ALPPSLGELP NLKELYIQNN KLSGEVPQAL
501: FKKSIIFNFS GNSDLRMGHS NTGRTIVIIV CAVVGAILIL VAAIVCYLFT CKRKKKSSDE TVVIAAPAKK LGSFFSEVAT ESAHRFALSE IEDATDKFDR
601: RIGSGGFGIV YYGKLTDGRE IAVKLLTNDS YQGIREFLNE VTLLSRIHHR NLVSFLGYSQ QDGKNILVYE FMHNGTLKEH LRGGPDDVKI NSWVKRLEIA
701: EDAAKGIEYL HTGCSPTIIH RDLKSSNILL DKNMRAKVAD FGLSKPVVDG SHVSSIVRGT VGYLDPEYYI SQQLTEKSDM YSFGVILLEL ISGHEPISND
801: NFGLHCRNIV EWARSHMESG DIHGIIDQSL DAGYDLQSVW KIAEVATMCV KPKGVLRPSI SEVLKEIQDA IAIELQRELP SSIHHLMSKT SPSEAVNTTG
901: SLQDLEQNAS FDELLMRPGL R
Best Arabidopsis Sequence Match ( AT2G37050.3 )
(BLAST)
001: MVRISLLLLC LLVSTCLFTS SSAQAPGFVS LDCGGAEPFT DELGLKWSPD NHLIYGETAN ISSVNETRTQ YTTLRHFPAD SRKYCYTLNV TSRNRYLIRA
101: TFLYGNFDNS NNVYPKFDIS LGATHWATIV ISETYIIETA ELVFLASSPT VSVCLSNATT GQPFISTLEL RQLSGSMYGS MLSEDRFYLS VAARINFGAE
201: SEASVRYPDD PYDRIWESDL QKKPNYLVDV AAGTVRVSTT LPIESRVDDR PPQKVMQTAV VGTNGSLTYR MNLDGFPGFG WAFTYFAEIE DLAEDESRKF
301: RLVLPEQPEY SKSVVNIKEN TQRPYRVYAP GYPNITLPFV LNFRFAKTAD SSRGPILNAM EISKYLRKSD GSVDATVMAN VASLYSSTEW AQEGGDPCSP
401: SPWSWVQCNS DPQPRVVAIK LSSMNLTGNI PSDLVKLTGL VELWLDGNSF TGPIPDFSRC PNLEIIHLEN NRLTGKIPSS LTKLPNLKEL YLQNNVLTGT
501: IPSDLAKDVI SNFSGNLNLE KSGDKGKKLG VIIGASVGAF VLLIATIISC IVMCKSKKNN KLGKTSAELT NRPLPIQRVS STLSEAHGDA AHCFTLYEIE
601: EATKKFEKRI GSGGFGIVYY GKTREGKEIA VKVLANNSYQ GKREFANEVT LLSRIHHRNL VQFLGYCQEE GKNMLVYEFM HNGTLKEHLY GVVPRDRRIS
701: WIKRLEIAED AARGIEYLHT GCVPAIIHRD LKTSNILLDK HMRAKVSDFG LSKFAVDGTS HVSSIVRGTV GYLDPEYYIS QQLTEKSDVY SFGVILLELM
801: SGQEAISNES FGVNCRNIVQ WAKMHIDNGD IRGIIDPALA EDDYSLQSMW KIAEKALLCV KPHGNMRPSM SEVQKDIQDA IRIEKEALAA RGGISDEFSR
901: SSAHSSSLNM GMLDLAGSQS YVSIDESVLQ PTAR
Arabidopsis Description
Leucine-rich repeat protein kinase family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGM1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.