Factsheet for GSMUA_Achr6P34450_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 4
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular	16.78	75.49
GSMUA_Achr8P17390_001	Banana	cytosol	56.43	75.4
TraesCS5D01G161800.1	Wheat	plasma membrane	68.41	68.11
HORVU5Hr1G048950.2	Barley	plasma membrane	68.3	67.93
TraesCS5A01G156400.2	Wheat	plasma membrane	68.19	67.9
KXG22750	Sorghum	plasma membrane	68.85	67.88
TraesCS5B01G154600.2	Wheat	plasma membrane	68.08	67.79
EES09072	Sorghum	plasma membrane	69.17	67.63
Os12t0102500-01	Rice	plasma membrane	67.43	67.21
Zm00001d052306_P004	Maize	plasma membrane	66.78	66.99
Os11t0102900-01	Rice	plasma membrane	67.21	66.77
GSMUA_Achr6P33110_001	Banana	plasma membrane	63.83	64.11
Solyc12g039080.1.1	Tomato	cytosol	20.04	62.16
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, plastid	10.46	41.74
GSMUA_Achr6P26480_001	Banana	cytosol	11.76	40.91
HORVU2Hr1G048130.1	Barley	mitochondrion	11.33	37.55
GSMUA_Achr4P15390_001	Banana	plasma membrane	21.9	36.48
GSMUA_Achr4P15380_001	Banana	cytosol, nucleus, plasma membrane	5.77	35.81
GSMUA_Achr9P05980_001	Banana	plasma membrane	11.33	35.14
GSMUA_Achr9P09200_001	Banana	plasma membrane	20.59	30.05
GSMUA_Achr3P19480_001	Banana	mitochondrion, plasma membrane, plastid, vacuole	30.39	29.31

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr6G34450_001	EnsemblPlants:GSMUA_Achr6P34450_001	EnsemblPlants:GSMUA_Achr6T34450_001	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675
InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M0TCN8	InterPro:Malectin-like_Carb-bd_dom	PFAM:PF07714
PFAM:PF12819	PFAM:PF13855	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003
PANTHER:PTHR27003:SF141	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0002961B58	SEG:seg	:

Description

Putative Probable LRR receptor-like serine/threonine-protein kinase At1g67720 [Source:GMGC_GENE;Acc:GSMUA_Achr6G34450_001]

Coordinates

chr6:-:33055812..33062256

Molecular Weight (calculated)

102499.0 Da

IEP (calculated)

6.017

GRAVY (calculated)

-0.183

Length

918 amino acids

Sequence
(BLAST)

001: MVLDVKINLS YLPNFSDAGF ISLDCGGTDE YTDDIGLEWT PDSNIIHGQT ASISIPGESR KQYMKVRYFP ADSSKYCYTL SVKSRTRYLV RATFLYGNFD
101: RSNVYPKFDI FLGATYWSTI VISDAATIEV QELVLLTSSP TVSVCLSNAS TGQPFISTLE LRQFNGSLYY TIYETQFFLK LSARINFGAE STDSVRFPDD
201: PFDRIWESDA KRRANYLVDV APGTERVSTT MPIDVSTFEM PPEKVMQTAV VGQNGSLTYR LDLDGFPGYG WAFSYFAEIE ELSPNETRKF KLVVPGMPAY
301: SKPTVNVQEN AQGKYRLYEP GYTNVSLPFV FSFGFKKTND SSRGPILNAL EIYVYLQINY GSQDGNLSYS SIWIYCNLHK NIIMSGDPCL PASWSWVQCS
401: TDPQPRIISI FLSGKNLTGD IPTELSKLAG LVEIHLDGNS LTGLIPDFSR SVNLNKIHLE NNELTGPLPS YLANLPSLKE LYVQNNHLIG VIPKGLLNKN
501: IILNYSGNKG LHKESKDLYH VIIIVFSVLG ACLFLLSIII CCLFLRKTRK NLPKDDVPNV QPAQKLGTFF SEVSAETAHR YTLSEIEDAT GKFERRIGSG
601: GFGIVYYGKM VDGKEIAVKV LTNDSYQGIR EFLNEVTLLS RIHHRNLVTF LGYSQQDGRN ILVYEFMQNG TLKEHLRGPL AHERNLGWIN RLEIAEDAAK
701: GIEYLHTGCF PTIIHRDLKS SNILLDKHMR AKVADFGLSK PAVDGSHISS IVRGTVGYLD PEYYTSQQLT EKSDVYSFGV ILLELISGQE PISSESFGLN
801: CRNIVAWAKS HVESGNIEAI IDPSLRDDYN VQSVWKIAEI SIMCVNPHGS QRPSITEVLK EIQGAIEVER GSRLGGDHTM GPQSKNSTDH SMNSNAGELA
901: TPEQNVTFPE FFLGPGLR

Best Arabidopsis Sequence Match ( AT2G37050.1 )
(BLAST)

001: MVRISLLLLC LLVSTCLFTS SSAQAPGFVS LDCGGAEPFT DELGLKWSPD NHLIYGETAN ISSVNETRTQ YTTLRHFPAD SRKYCYTLNV TSRNRYLIRA
101: TFLYGNFDNS NNVYPKFDIS LGATHWATIV ISETYIIETA ELVFLASSPT VSVCLSNATT GQPFISTLEL RQLSGSMYGS MLSEDRFYLS VAARINFGAE
201: SEASVRYPDD PYDRIWESDL QKKPNYLVDV AAGTVRVSTT LPIESRVDDR PPQKVMQTAV VGTNGSLTYR MNLDGFPGFG WAFTYFAEIE DLAEDESRKF
301: RLVLPEQPEY SKSVVNIKEN TQRPYRVYAP GYPNITLPFV LNFRFAKTAD SSRGPILNAM EISKYLRKSD GSVDATVMAN VASLYSSTEW AQEGGDPCSP
401: SPWSWVQCNS DPQPRVVAIK LSSMNLTGNI PSDLVKLTGL VELWLDGNSF TGPIPDFSRC PNLEIIHLEN NRLTGKIPSS LTKLPNLKEL YLQNNVLTGT
501: IPSDLAKDVI SNFSGNLNLE KSGDKGKKLG VIIGASVGAF VLLIATIISC IVMCKSKKNN KLGKTSELTN RPLPIQRVSS TLSEAHGDAA HCFTLYEIEE
601: ATKKFEKRIG SGGFGIVYYG KTREGKEIAV KVLANNSYQG KREFANEVTL LSRIHHRNLV QFLGYCQEEG KNMLVYEFMH NGTLKEHLYG VVPRDRRISW
701: IKRLEIAEDA ARGIEYLHTG CVPAIIHRDL KTSNILLDKH MRAKVSDFGL SKFAVDGTSH VSSIVRGTVG YLDPEYYISQ QLTEKSDVYS FGVILLELMS
801: GQEAISNESF GVNCRNIVQW AKMHIDNGDI RGIIDPALAE DDYSLQSMWK IAEKALLCVK PHGNMRPSMS EVQKDIQDAI RIEKEALAAR GGISDEFSRS
901: SAHSSSLNMG MLDLAGSQSY VSIDESVLQP TAR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGM1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.