Factsheet for GSMUA_Achr4P15390_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
EpiLoc:	plasma membrane
MultiLoc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P15380_001	Banana	cytosol, nucleus, plasma membrane	19.96	74.32
CDX87851	Canola	cytosol	22.69	56.05
CDY39524	Canola	cytosol	21.96	54.02
GSMUA_Achr6P26480_001	Banana	cytosol	25.41	53.03
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, plastid	21.78	52.17
CDY72115	Canola	cytosol	21.42	50.86
KRH44235	Soybean	cytosol	19.24	49.3
Bra030691.1-P	Field mustard	cytosol	27.04	48.38
VIT_09s0002g02870.t01	Wine grape	cytosol	21.05	48.33
VIT_09s0002g02710.t01	Wine grape	cytosol	20.51	48.09
CDX91466	Canola	cytosol	23.05	47.57
CDY19842	Canola	cytosol	27.77	46.5
CDY21773	Canola	cytosol, nucleus, plasma membrane	24.14	45.7
Bra019480.1-P	Field mustard	cytosol	25.59	45.48
CDX76454	Canola	cytosol	27.77	44.61
AT3G46355.1	Thale cress	cytosol	23.41	44.33
GSMUA_Achr9P05980_001	Banana	plasma membrane	23.77	44.26
CDX68373	Canola	cytosol, nucleus, plasma membrane	23.41	43.88
CDY42327	Canola	cytosol	26.32	43.81
HORVU4Hr1G079270.1	Barley	cytosol	27.59	43.8
AT3G46410.1	Thale cress	cytosol	23.05	43.64
KRH44241	Soybean	plasma membrane, plastid	33.58	42.92
CDX88716	Canola	plastid	21.96	42.76
CDY02705	Canola	cytosol	13.79	42.46
CDY65586	Canola	cytosol	13.79	41.99
AT3G45920.1	Thale cress	cytosol	14.52	41.67
KRH44228	Soybean	plastid	33.76	40.7
CDY22854	Canola	mitochondrion	22.5	39.87
VIT_09s0002g02900.t01	Wine grape	cytosol	21.05	39.46
Bra002545.1-P	Field mustard	plastid	21.42	38.31
Os09t0358000-00	Rice	cytosol	9.44	37.68
CDY07242	Canola	plastid	25.41	37.53
CDY00634	Canola	plastid	26.32	37.28
Bra018919.1-P	Field mustard	plasma membrane	17.06	36.15
AT1G51620.2	Thale cress	cytosol	21.78	35.71
CDY55667	Canola	plastid	21.6	34.0
VIT_09s0002g02890.t01	Wine grape	cytoskeleton, cytosol, plastid	26.32	32.29
GSMUA_Achr8P17390_001	Banana	cytosol	36.66	29.4
GSMUA_Achr9P09200_001	Banana	plasma membrane	31.03	27.19
AT2G28960.2	Thale cress	plasma membrane	38.48	24.09
AT1G51910.1	Thale cress	plasma membrane	38.29	24.09
CDY33849	Canola	plasma membrane	36.66	22.9
GSMUA_Achr6P34450_001	Banana	plasma membrane, vacuole	36.48	21.9
Bra030415.1-P	Field mustard	plasma membrane	26.5	21.31
GSMUA_Achr6P33110_001	Banana	plasma membrane	34.3	20.68
GSMUA_Achr3P19480_001	Banana	mitochondrion, plasma membrane, plastid, vacuole	34.12	19.75
CDX68371	Canola	plasma membrane	28.49	17.8
VIT_09s0002g02840.t01	Wine grape	cytoskeleton, cytosol, nucleus	29.95	14.1
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular	0.36	0.98

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr4G15390_001	EnsemblPlants:GSMUA_Achr4P15390_001	EnsemblPlants:GSMUA_Achr4T15390_001	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675
InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M0SP54	PFAM:PF07714	PFAM:PF13855
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27003	PANTHER:PTHR27003:SF44
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI000295BBFC	SEG:seg	:	:

Description

Putative Probable LRR receptor-like serine/threonine-protein kinase At1g51880 [Source:GMGC_GENE;Acc:GSMUA_Achr4G15390_001]

Coordinates

chr4:-:11598985..11607973

Molecular Weight (calculated)

60725.9 Da

IEP (calculated)

6.932

GRAVY (calculated)

-0.142

Length

551 amino acids

Sequence
(BLAST)

001: MLVDAMAEIR LQYQLKRNWM GDPCAPKAYT WDGLNCSYGP DPPRIISINL TSAGLSGEIS SSFAMLKAVK HLYLSQNNFN GTIPDSLGSL SSLQVLDLSC
101: NNLTGNIPDS LGLLSSLQVL NLSGNNFNGS VPDTLLKKAA TGLLTLRVDK KGCTKVPSSS TKHKTHVVVI ISVVSGLLLL VVVLIVIVWS TRRLRGQDSN
201: TFVQPQSEDH FLQRDHQVSF EGRQFTYAQL VNITNNFTRV IGKGGFGMIY HGCLETGKQV AIKMCFVSSP QGMKEFLAEA QNLTRIYHRN LVSLVGYCMD
301: GNCPTLVYEY MKQGSLQEHL RGLAGHSRGL SWGQRLQIAL NAAQGLEYLH RGCKPPIIHR DVKTSNILLN EELEARIADF GLSKSFHSDE QTHVSTESVV
401: GTPGYIDPEY HQTYQLTEKS DVYSFGVVLL ELITGRPPLV PGSGNTHIVQ WITPHLSRGS IDDIVDESLR GEYDPTCAWK ILDLAIRCTA NKGSQRPTMF
501: EVVMQLRSCL ELVIASDKCE NENVYSGDFN VDQESASDIG TNMPGPTVPT R

Best Arabidopsis Sequence Match ( AT1G51850.1 )
(BLAST)

001: MERHCVLVAT FLLMLHIVHA QDQIGFISVD CGLAPRESPY NEAKTGLTYT SDDGLVNVGK PGRIAKEFEP LADKPTLTLR YFPEGVRNCY NLNVTSDTNY
101: LIKATFVYGN YDGLNVGPNF DLYFGPNLWT TVCLIKTGIS IPFINVLELR PMKKNMYVTQ GESLNYLFRV YISNSSTRIR FPDDVYDRKW YPYFDNSWTQ
201: VTTTLDVNTS LTYELPQSVM AKAATPIKAN DTLNITWTVE PPTTKFYSYM HFAELQTLRA NDAREFNVTM NGIYTYGPYS PKPLKTETIY DKIPEQCDGG
301: ACLLQVVKTL KSTLPPLLNA IEAFTVIDFP QMETNGDDVD AIKNVQDTYG ISRISWQGDP CVPKLFLWDG LNCNNSDNST SPIITSLDLS SSGLTGSITQ
401: AIQNLTNLQE LDLSDNNLTG EIPDFLGDIK SLLVINLSGN NLSGSVPPSL LQKKGMKLNV EGNPHLLCTA DSCVKKGEDG HKKKSVIVPV VASIASIAVL
501: IGALVLFFIL RKKKSPKVEG PPPSYMQASD GRSPRSSEPA IVTKNRRFTY SQVAIMTNNF QRILGKGGFG MVYHGFVNGT EQVAVKILSH SSSQGYKEFK
601: AEVELLLRVH HKNLVGLVGY CDEGENMALI YEYMANGDLK EHMSGTRNRF TLNWGTRLKI VVESAQGLEY LHNGCKPPMV HRDVKTTNIL LNEHFQAKLA
701: DFGLSRSFPI EGETHVSTVV AGTPGYLDPE YYKTNWLTEK SDVYSFGIVL LELITNRPVI DKSREKPHIA EWVGVMLTKG DINSIMDPNL NEDYDSGSVW
801: KAVELAMSCL NPSSARRPTM SQVVIELNEC IASENSRGGA SRDMDSKSSI EVSLTFDTEL SPTAR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:TAIR;Acc:AT1G51850]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.