Factsheet for VIT_09s0002g02840.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytoskeleton, nucleus, cytosol

Predictor Summary:

nucleus 4
mitochondrion 1
cytoskeleton 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g02890.t01	Wine grape	cytoskeleton, cytosol, plastid	33.76	87.97
VIT_09s0002g02710.t01	Wine grape	cytosol	10.77	53.62
VIT_09s0002g02870.t01	Wine grape	cytosol	10.68	52.08
VIT_09s0002g02900.t01	Wine grape	cytosol	12.65	50.34
TraesCS1B01G358500.1	Wheat	cytosol	12.14	44.65
GSMUA_Achr6P26480_001	Banana	cytosol	10.0	44.32
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, plastid	8.29	42.17
HORVU4Hr1G079270.1	Barley	cytosol	12.31	41.5
TraesCS1D01G033400.1	Wheat	cytosol	13.25	40.16
GSMUA_Achr9P05980_001	Banana	plasma membrane	9.4	37.16
GSMUA_Achr4P15380_001	Banana	cytosol, nucleus, plasma membrane	4.53	35.81
VIT_00s0211g00040.t01	Wine grape	cytosol	5.47	32.16
GSMUA_Achr4P15390_001	Banana	plasma membrane	14.1	29.95
Os09t0358000-00	Rice	cytosol	3.5	29.71
TraesCS1D01G347300.1	Wheat	cytosol, plasma membrane, plastid	9.49	26.18
TraesCS1B01G358400.1	Wheat	plasma membrane	17.35	21.66
TraesCS1B01G039600.1	Wheat	plastid	16.07	21.44
VIT_01s0010g02210.t01	Wine grape	plasma membrane	16.24	20.52
VIT_08s0040g03140.t01	Wine grape	plasma membrane	15.38	19.48
VIT_07s0005g06500.t01	Wine grape	plasma membrane	14.27	18.45
TraesCS6D01G120500.1	Wheat	cytosol	1.71	17.39
VIT_00s0211g00030.t01	Wine grape	plasma membrane	7.01	11.42

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	ProteinID:CCB59380	ProteinID:CCB59380.1	ncoils:Coil
UniProt:F6HY57	EMBL:FN596494	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PFAM:PF07714	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	ScanProsite:PS00109
PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF105	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TIGR:TC61943	TIGR:TC66302	InterPro:Tyr_kinase_AS
UniParc:UPI000210A76F	ArrayExpress:VIT_09s0002g02840	EnsemblPlantsGene:VIT_09s0002g02840	EnsemblPlants:VIT_09s0002g02840.t01	unigene:Vvi.1673	unigene:Vvi.5950
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr9:+:2596002..2603082

Molecular Weight (calculated)

128793.0 Da

IEP (calculated)

5.117

GRAVY (calculated)

-0.391

Length

1170 amino acids

Sequence
(BLAST)

0001: MVLVYEHMAE GNLKEYLSGK KEIVLSWEQR LQIAIDAAQA LEYLHDACNP PIIHRDVKPE NILLTKKFQA KVADFGWSRS LPSEGGSYVS TAIVGTPGYI
0101: DPEYNRTSLP SKKTDVYSFG IVLLEVISGQ PVIIKITKES SCNIADWVRL VTAKGDIKMI VDPRLQGEFE ANSAWRAVET AMSCVLLSST DRPTMSHVVV
0201: ELKECLKIAM VHERTDNAEE DQGPVSIEAV HERTDNVEED CDPFGSEAAY ERTDDAAEDH GPLGVEAAHE VTNNAKEDQG PVGIEAPHER NDSGREGHGS
0301: VGIGAAHKRN DNGEEDQCPV GIEAAHERHD DGKEDHGPDG IEAAHEITDN AEEDQGLVGI EATQERTDIV EENHGPVGIE AAHERNDNDE EDHGPVGIEA
0401: THERTDNVEE NHGPLGSEAA MAIQERTNSY GAAKEKKKEK KKNVVVSPVA SITSVVVPSD IVVKPNEDDK TFEPKNQHLT YSEIERITEN FQKELGKGAS
0501: AIVYHGHLSN GTEVAVKKLS PSSILGSKQF KTEAQLLTRV HHKNLVSLFG YCDEGSNMVL IYEYMAKGNL KAYLSGKTEA ALSWEQRLRI AIDAAQALEY
0601: LHNGCNPPII HRDVKTENIL LNEKLQAKVA DFGWSKSMPV EGGSYVSTAI VGTPGYLDPE YHRNSVPNEK TDVYSFGIVL LELISSRPAI IKITEDNRCN
0701: ITYWVRPIIA KGDIRMIVDP RLQGKFETNS ARRAIETAMS CVSLSSTDRP TMSDIIVELR ECLKIVMTHE RTKEGHASVG IEAAMTVQES FNGNQDFLTT
0801: GSNAKAAEKE KEKDEKKKKK KKKNFIGPAV TSITSVLVPS GALASLGKSK KKWPHAKDKS YSEVARITNN FQQVIGCGAF ASVYLGYLSD GTEVAVKLLS
0901: SSTRGSQDLQ TEAQLLTRIR HKNLVSLHGY HDEGSIIALI YEYMVKGSLR KYLSDENEVV LSWKQRIGIA LDVAQGLEYL HDGCRPPIIH RDVTSANILL
1001: NEKLQAKVAD MGLSRSLPID DLTDISTVVV GTPGYLDPEY FQSNRVSMKS DVYSFGVVLL ELVSGQPALI KSTNGITDHL INWVRPLIDR REIRGIVDPR
1101: LNGDFDISSA WKAVETAMAC VRFSSVDRPT MSDIAYELKG CVNCLAIATG DVEEDLGSFI IEDAMLHQPS

Best Arabidopsis Sequence Match ( AT1G51805.2 )
(BLAST)

001: MESHRVFVAT FMLILHLVQA QDQPGFINVD CGLLPRDSPY NALGTGLVYT SDVGLVSSGK TGKIAKEFEE NNSTPNLTLR YFPDGARNCY NLNVSRDTNY
101: MIKATFVYGN YDGHKDEPNF DLYLGPNLWA TVSRSETVEE IIHVTKSDSL QVCLAKTGDF IPFINILELR PLKKNVYPDD IYDRVWHASF LENNWAQVST
201: TLGVNVTDNY DLSQDVMATG ATPLNDSETL NITWNVEPPT TKVYSYMHFA ELETLRANDT REFNVMLNGN DLFGPYSPIP LKTETETNLK PEECEDGACI
301: LQLVKTSKST LPPLLNAIEA FTVIDFLQVE TDEDDAAAIK NVQNAYGLIN RSSWQGDPCV PKQYSWDGLK CSYSDSTPPI INFLDLSASG LTGIIAPAIQ
401: NLTHLEILAL SNNNLTGEVP EFLADLKSIM VIDLRGNNLS GPVPASLLQK KGLMLHLDDN PHILCTTGSC MHKGEGEKKS IIVPVVASIV SLAVIIGALI
501: LFLVFRKKKA SKVEGTLPSY MQASDGRSPR SSEPAIVTKN KRFTYSQVVI MTNNFQRILG KGGFGIVYHG FVNGVEQVAV KILSHSSSQG YKQFKAEVEL
601: LLRVHHKNLV GLVGYCDEGE NMALIYEYMA NGDLKEHMSG TRNRFILNWE TRLKIVIDSA QGLEYLHNGC KPLMVHRDVK TTNILLNEHF EAKLADFGLS
701: RSFPIGGETH VSTVVAGTPG YLDPEYYKTN RLTEKSDVYS FGIVLLEMIT NRPVIDQSRE KPYISEWVGI MLTKGDIISI MDPSLNGDYD SGSVWKAVEL
801: AMSCLNPSST RRPTMSQVLI ALNECLVSEN SRGGASRDMD SKSSLEVSLT FDTDVSPMAR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4IB63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.