Factsheet for TraesCS1D01G033400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87851	Canola	cytosol	31.09	53.81
GSMUA_Achr6P26480_001	Banana	cytosol	36.79	53.79
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, plastid	30.31	50.87
CDY72115	Canola	cytosol	29.79	49.57
CDY39524	Canola	cytosol	27.98	48.21
Bra030691.1-P	Field mustard	cytosol	37.05	46.43
GSMUA_Achr9P05980_001	Banana	plasma membrane	34.72	45.27
VIT_09s0002g02710.t01	Wine grape	cytosol	27.46	45.11
CDX91466	Canola	cytosol	31.09	44.94
HORVU4Hr1G079270.1	Barley	cytosol	40.16	44.67
KRH44235	Soybean	cytosol	24.87	44.65
CDX76454	Canola	cytosol	39.12	44.02
AT3G46410.1	Thale cress	cytosol	32.9	43.64
CDX68373	Canola	cytosol, nucleus, plasma membrane	33.16	43.54
CDY21773	Canola	cytosol, nucleus, plasma membrane	32.64	43.3
AT3G46355.1	Thale cress	cytosol	32.38	42.96
Bra019480.1-P	Field mustard	cytosol	34.46	42.9
CDY19842	Canola	cytosol	36.53	42.86
VIT_09s0002g02870.t01	Wine grape	cytosol	26.17	42.08
Os09t0358000-00	Rice	cytosol	14.77	41.3
CDY02705	Canola	cytosol	18.65	40.22
TraesCS1D01G347300.1	Wheat	cytosol, plasma membrane, plastid	43.52	39.62
CDY42327	Canola	cytosol	33.42	38.97
Bra018919.1-P	Field mustard	plasma membrane	25.39	37.69
CDY65586	Canola	cytosol	17.62	37.57
VIT_09s0002g02900.t01	Wine grape	cytosol	28.5	37.41
CDY22854	Canola	mitochondrion	30.05	37.3
CDX88716	Canola	plastid	27.2	37.1
AT3G45920.1	Thale cress	cytosol	18.13	36.46
KRH44241	Soybean	plasma membrane, plastid	38.6	34.57
AT1G51620.2	Thale cress	cytosol	29.79	34.23
TraesCS1B01G039600.1	Wheat	plastid	76.17	33.52
CDY00634	Canola	plastid	33.68	33.42
CDY07242	Canola	plastid	32.12	33.24
VIT_09s0002g02890.t01	Wine grape	cytoskeleton, cytosol, plastid	38.6	33.18
Bra002545.1-P	Field mustard	plastid	25.65	32.14
KRH44228	Soybean	plastid	37.82	31.95
CDY55667	Canola	plastid	27.72	30.57
TraesCS6D01G120500.1	Wheat	cytosol	8.29	27.83
Bra030415.1-P	Field mustard	plasma membrane	36.79	20.73
TraesCS2D01G208100.1	Wheat	plasma membrane	30.31	18.34
AT2G28960.2	Thale cress	plasma membrane	39.38	17.27
AT1G51910.1	Thale cress	plasma membrane	38.34	16.89
CDY33849	Canola	plasma membrane	37.82	16.55
CDX68371	Canola	plasma membrane	35.23	15.42
TraesCS5D01G161800.1	Wheat	plasma membrane	36.53	15.29
TraesCS3D01G543900.2	Wheat	plasma membrane	36.27	14.43
VIT_09s0002g02840.t01	Wine grape	cytoskeleton, cytosol, nucleus	40.16	13.25

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003
PANTHER:PTHR27003:SF247	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS1D01G033400	EnsemblPlants:TraesCS1D01G033400.1	TIGR:cd14066	SEG:seg	:	:

Description

No Description!

Coordinates

chr1D:-:13362256..13368219

Molecular Weight (calculated)

43305.5 Da

IEP (calculated)

7.306

GRAVY (calculated)

-0.467

Length

386 amino acids

Sequence
(BLAST)

001: MLRRRKQQQG SMNNMTTIKP QNKEEMSTRH GGASDSLRLV QNRRFTYKEL EMITNGFERV LAQGGFGRVY DGFLEDGTQV AVKLRSHSSK QGVNEFLTEA
101: QILNRIHHKN LVTMIGYCKD GEYMALVYEY MSQGTLQEHI AGSDRSLPWR QRLRIALEYA QGLEYLHKGC NPPLIHRDVK ATNILLNARL EAKIADFGLS
201: KAFNNHDGNY VSTNTIVGTP GYVDPEYQAT VQPTTKSDVY SFGVVLLELV TGKPALLSEM EPMNIIHWVR QRLARGNMED VVDVRMHGGC NVNVVSKVAE
301: IALNCTALAS AQRPTMADVV VQLQECMELD EGRTRDFNTD DSNNDDSSWN YNAYASGQST DVSRNAAFGT ELRMPTVGLR LAPTTR

Best Arabidopsis Sequence Match ( AT1G51850.1 )
(BLAST)

001: MERHCVLVAT FLLMLHIVHA QDQIGFISVD CGLAPRESPY NEAKTGLTYT SDDGLVNVGK PGRIAKEFEP LADKPTLTLR YFPEGVRNCY NLNVTSDTNY
101: LIKATFVYGN YDGLNVGPNF DLYFGPNLWT TVCLIKTGIS IPFINVLELR PMKKNMYVTQ GESLNYLFRV YISNSSTRIR FPDDVYDRKW YPYFDNSWTQ
201: VTTTLDVNTS LTYELPQSVM AKAATPIKAN DTLNITWTVE PPTTKFYSYM HFAELQTLRA NDAREFNVTM NGIYTYGPYS PKPLKTETIY DKIPEQCDGG
301: ACLLQVVKTL KSTLPPLLNA IEAFTVIDFP QMETNGDDVD AIKNVQDTYG ISRISWQGDP CVPKLFLWDG LNCNNSDNST SPIITSLDLS SSGLTGSITQ
401: AIQNLTNLQE LDLSDNNLTG EIPDFLGDIK SLLVINLSGN NLSGSVPPSL LQKKGMKLNV EGNPHLLCTA DSCVKKGEDG HKKKSVIVPV VASIASIAVL
501: IGALVLFFIL RKKKSPKVEG PPPSYMQASD GRSPRSSEPA IVTKNRRFTY SQVAIMTNNF QRILGKGGFG MVYHGFVNGT EQVAVKILSH SSSQGYKEFK
601: AEVELLLRVH HKNLVGLVGY CDEGENMALI YEYMANGDLK EHMSGTRNRF TLNWGTRLKI VVESAQGLEY LHNGCKPPMV HRDVKTTNIL LNEHFQAKLA
701: DFGLSRSFPI EGETHVSTVV AGTPGYLDPE YYKTNWLTEK SDVYSFGIVL LELITNRPVI DKSREKPHIA EWVGVMLTKG DINSIMDPNL NEDYDSGSVW
801: KAVELAMSCL NPSSARRPTM SQVVIELNEC IASENSRGGA SRDMDSKSSI EVSLTFDTEL SPTAR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:TAIR;Acc:AT1G51850]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.