Factsheet for VIT_09s0002g02890.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytoskeleton, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
cytoskeleton 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g02710.t01	Wine grape	cytosol	27.17	51.91
VIT_09s0002g02870.t01	Wine grape	cytosol	27.17	50.83
VIT_09s0002g02900.t01	Wine grape	cytosol	31.4	47.96
TraesCS1B01G358500.1	Wheat	cytosol	31.18	44.03
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, plastid	21.6	42.17
GSMUA_Achr6P26480_001	Banana	cytosol	24.72	42.05
HORVU4Hr1G079270.1	Barley	cytosol	30.51	39.48
TraesCS1D01G033400.1	Wheat	cytosol	33.18	38.6
GSMUA_Achr9P05980_001	Banana	plasma membrane	23.39	35.47
GSMUA_Achr4P15380_001	Banana	cytosol, nucleus, plasma membrane	11.14	33.78
VIT_09s0002g02840.t01	Wine grape	cytoskeleton, cytosol, nucleus	87.97	33.76
VIT_00s0211g00040.t01	Wine grape	cytosol	13.59	30.65
Os09t0358000-00	Rice	cytosol	9.13	29.71
GSMUA_Achr4P15390_001	Banana	plasma membrane	32.29	26.32
TraesCS1D01G347300.1	Wheat	cytosol, plasma membrane, plastid	20.49	21.7
TraesCS1B01G039600.1	Wheat	plastid	35.86	18.36
TraesCS1B01G358400.1	Wheat	plasma membrane	34.97	16.76
VIT_01s0010g02210.t01	Wine grape	plasma membrane	32.74	15.87
VIT_08s0040g03140.t01	Wine grape	plasma membrane	31.85	15.48
VIT_07s0005g06500.t01	Wine grape	plasma membrane	29.84	14.81
TraesCS6D01G120500.1	Wheat	cytosol	3.56	13.91
VIT_00s0211g00030.t01	Wine grape	plasma membrane	12.69	7.94

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	ProteinID:CCB59383	ProteinID:CCB59383.1	UniProt:F6HY60
EMBL:FN596494	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003
PANTHER:PTHR27003:SF105	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000210A772	ArrayExpress:VIT_09s0002g02890	EnsemblPlantsGene:VIT_09s0002g02890	EnsemblPlants:VIT_09s0002g02890.t01	:	:

Description

No Description!

Coordinates

chr9:+:2647826..2651601

Molecular Weight (calculated)

49855.6 Da

IEP (calculated)

5.773

GRAVY (calculated)

-0.259

Length

449 amino acids

Sequence
(BLAST)

001: MPSEGGSYVS TAIVGTPGYI DPEYDKTSVP SKKTDIYSFG IVLLELISGR PAIIKITKES PCNIADWVHL VTAKGDIKMI VDPRLQGEFD PNSAQRAVET
101: AMYCVPVSSI DRPTMNIVVK PNEDDKTFEP KNQHLTYFEV ERITDNFQKE LGRGASSIVY HGHLSNGTEV AVKKLSPSSI LGSKQFKTEA QLLTRVHHKN
201: LVSLFGYCDE GSNMVLIYEY MAKGNVKAYL SGKTEAVLSW EQRLQIAIDA AQALEYLHNG CNPPIIHRDI KTENILLNEK LQAKVADFGW SKSMPAEGGS
301: YVLTAIVGTP GYLDPEYHRS SVPNEKTDVY SFGIVLLELI SGRPAIIKIT KENLCNITNW VHHIIAKGDI RMIVDPRLQG EFETNSARRT IETAMSCVSF
401: SSTERPTMSD IVVELRECLK IAMAHERTNN LEEDHDSAGI EAAMTAEER

Best Arabidopsis Sequence Match ( AT1G51800.1 )
(BLAST)

001: MAFSSCFLLV LLQIFSALLL CLAQDQSGFI SLDCGSPRET SFREKTTNIT YISDANFINT GVGGSIKQGY RTQFQQQTWN LRSFPQGIRN CYTLNLTIGD
101: EYLIRANFLH GGYDDKPSTQ FELYLGPNLW STVTTTNETE ASIFEMIHIL TTDRLQICLV KTGNATPFIS ALELRKLMNT TYLTRQGSLQ TFIRADVGAT
201: VNQGYRYGID VFDRVWTPYN FGNWSQISTN QSVNINNDYQ PPEIAMVTAS VPTDPDAAMN ISLVGVERTV QFYVFMHFAE IQELKSNDTR EFNIMYNNKH
301: IYGPFRPLNF TTSSVFTPTE VVADANGQYI FSLQRTGNST LPPLLNAMEI YSVNLLPQQE TDRKEVDAMM NIKSAYGVNK IDWEGDPCVP LDYKWSGVNC
401: TYVDNETPKI ISLDLSTSGL TGEILEFISD LTSLEVLDLS NNSLTGSVPE FLANMETLKL INLSGNELNG SIPATLLDKE RRGSITLSIE GNTGLCSSTS
501: CATTKKKKKN TVIAPVAASL VSVFLIGAGI VTFLILKRKK RTKLGLNPNS GTGTTPLHSR SHHGFEPPVI AKNRKLTYID VVKITNNFER VLGRGGFGVV
601: YYGVLNNEPV AVKMLTESTA LGYKQFKAEV ELLLRVHHKD LTCLVGYCEE GDKMSLIYEF MANGDLKEHL SGKRGPSILT WEGRLRIAAE SAQGLEYLHN
701: GCKPQIVHRD IKTTNILLNE KFQAKLADFG LSRSFPLGTE THVSTIVAGT PGYLDPEYYR TNWLTEKSDV FSFGVVLLEL VTNQPVIDMK REKSHIAEWV
801: GLMLSRGDIN SIVDPKLQGD FDPNTIWKVV ETAMTCLNPS SSRRPTMTQV VMDLKECLNM EMARNMGSRM TDSTNDSSIE LSMNFTTELN PGAR

Arabidopsis Description

IOS1LRR receptor-like serine/threonine-protein kinase IOS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8I6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.