Factsheet for VIT_00s0211g00040.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g02710.t01	Wine grape	cytosol	34.17	28.94
VIT_09s0002g02870.t01	Wine grape	cytosol	31.66	26.25
Os07t0568100-01	Rice	plasma membrane	69.35	23.96
Zm00001d021829_P001	Maize	plasma membrane	68.34	23.49
EER97395	Sorghum	plasma membrane	67.84	23.44
TraesCS2B01G227700.1	Wheat	plasma membrane	68.84	23.34
TraesCS2A01G200300.1	Wheat	plasma membrane	68.34	22.78
GSMUA_Achr9P09200_001	Banana	plasma membrane	70.35	22.26
PGSC0003DMT400078790	Potato	plastid	78.39	21.4
TraesCS2D01G208100.1	Wheat	plasma membrane	68.34	21.32
KRH74447	Soybean	plasma membrane	80.4	17.41
KRH39505	Soybean	plasma membrane	79.9	17.3
Solyc02g091590.2.1	Tomato	plasma membrane	77.89	17.16
VIT_09s0002g02900.t01	Wine grape	cytosol	24.62	16.67
VIT_09s0002g02890.t01	Wine grape	cytoskeleton, cytosol, plastid	30.65	13.59
HORVU2Hr1G058820.21	Barley	plasma membrane	45.23	12.95
VIT_07s0005g06500.t01	Wine grape	plasma membrane	37.69	8.29
VIT_01s0010g02210.t01	Wine grape	plasma membrane	36.68	7.88
VIT_08s0040g03140.t01	Wine grape	plasma membrane	36.18	7.79
VIT_09s0002g02840.t01	Wine grape	cytoskeleton, cytosol, nucleus	32.16	5.47
VIT_00s0211g00030.t01	Wine grape	plasma membrane	0.5	0.14

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	ProteinID:CCB50020	ProteinID:CCB50020.1	UniProt:F6HCS5	EMBL:FN595522
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF143	InterPro:Prot_kinase_dom
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI0002109886	ArrayExpress:VIT_00s0211g00040	EnsemblPlantsGene:VIT_00s0211g00040	EnsemblPlants:VIT_00s0211g00040.t01
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:12820417..12822332

Molecular Weight (calculated)

22336.5 Da

IEP (calculated)

4.632

GRAVY (calculated)

-0.327

Length

199 amino acids

Sequence
(BLAST)

001: MDHNMSAKVA DFGFSKYAPQ EGDSGVSLEV RGTAGYLDPE YYSTQHLSAK SDVFSYGVVL LEIISGREPL NIHRPRNEWS LVEWAKPYIR DSKIEEIVDP
101: SIKGGYHAEA MWRVVEVALA CIEPYSAYRP CMVDIVRELE DALIIENNAS EYMKSIDSFG GSNRFSIEKI ERKVVLPPTP TLTDPSPDIL QALTPPQPR

Best Arabidopsis Sequence Match ( AT1G49100.1 )
(BLAST)

001: MEKYFHGVLC VFIITVAFIH VVQAQDPNGF ITLDCGLLPD GSPYTNPSTG LTFTSDSSFI ESGKNGRVSK DSERNFEKAF VTLRYFPDGE RNCYNLNVTQ
101: GTNYLIRAAF LYGNYDGLNT VPNFDLFIGP NKVTTVNFNA TGGGVFVEII HMSRSTPLDI CLVKTGTTTP MISTLELRPL RSDTYISAIG SSLLLYFRGY
201: LNDSGVVLRY PDDVNDRRWF PFSYKEWKIV TTTLNVNTSN GFDLPQGAMA SAATRVNDNG TWEFPWSLED STTRFHIYLH FAELQTLLAN ETREFNVLLN
301: GKVYYGPYSP KMLSIDTMSP QPDSTLTCKG GSCLLQLVKT TKSTLPPLIN AIELFTVVEF PQSETNQDEV IAIKKIQLTY GLSRINWQGD PCVPEQFLWA
401: GLKCSNINSS TPPTITFLNL SSSGLTGIIS PSIQNLTHLQ ELDLSNNDLT GDVPEFLADI KSLLIINLSG NNFSGQLPQK LIDKKRLKLN VEGNPKLLCT
501: KGPCGNKPGE GGHPKKSIIV PVVSSVALIA ILIAALVLFL VLRKKNPSRS KENGRTSRSS EPPRITKKKK FTYVEVTEMT NNFRSVLGKG GFGMVYHGYV
601: NGREQVAVKV LSHASKHGHK QFKAEVELLL RVHHKNLVSL VGYCEKGKEL ALVYEYMANG DLKEFFSGKR GDDVLRWETR LQIAVEAAQG LEYLHKGCRP
701: PIVHRDVKTA NILLDEHFQA KLADFGLSRS FLNEGESHVS TVVAGTIGYL DPEYYRTNWL TEKSDVYSFG VVLLEIITNQ RVIERTREKP HIAEWVNLMI
801: TKGDIRKIVD PNLKGDYHSD SVWKFVELAM TCVNDSSATR PTMTQVVTEL TECVTLENSR GGKSQNMGST SSSEVTMTFD TEVNPVAR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4I065]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.