Factsheet for VIT_07s0005g06500.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400045511	Potato	plasma membrane, vacuole	74.03	74.11
Solyc09g060110.2.1	Tomato	plasma membrane, vacuole	73.7	73.78
KRH07483	Soybean	plasma membrane	71.49	68.9
Bra037463.1-P	Field mustard	plasma membrane	66.63	67.07
CDX85361	Canola	plasma membrane	66.52	66.96
AT5G48740.1	Thale cress	plasma membrane	65.97	66.7
CDX86282	Canola	plasma membrane	65.3	64.87
GSMUA_Achr3P19480_001	Banana	mitochondrion, plasma membrane, plastid, vacuole	63.65	60.5
VIT_09s0002g02870.t01	Wine grape	cytosol	10.61	40.0
VIT_09s0002g02710.t01	Wine grape	cytosol	10.06	38.72
VIT_00s0211g00040.t01	Wine grape	cytosol	8.29	37.69
VIT_09s0002g02900.t01	Wine grape	cytosol	11.93	36.73
VIT_08s0040g03140.t01	Wine grape	plasma membrane	33.15	32.47
VIT_01s0010g02210.t01	Wine grape	plasma membrane	32.6	31.86
VIT_09s0002g02890.t01	Wine grape	cytoskeleton, cytosol, plastid	14.81	29.84
VIT_00s0211g00030.t01	Wine grape	plasma membrane	23.09	29.11
VIT_09s0002g02840.t01	Wine grape	cytoskeleton, cytosol, nucleus	18.45	14.27

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100263624	wikigene:100263624	MapMan:18.4.1.1	Gene3D:2.60.120.430	Gene3D:3.30.200.20
Gene3D:3.80.10.10	ProteinID:CBI37326	ProteinID:CBI37326.3	UniProt:D7U3K7	EMBL:FN596502	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100263624
wikigene:LOC100263624	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	InterPro:Malectin-like_Carb-bd_dom	PFAM:PF00069
PFAM:PF12819	PFAM:PF13855	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51450
PANTHER:PTHR27003	PANTHER:PTHR27003:SF248	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00369
SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00015CBD97
ArrayExpress:VIT_07s0005g06500	EnsemblPlantsGene:VIT_07s0005g06500	EnsemblPlants:VIT_07s0005g06500.t01	RefSeq:XP_002268160	RefSeq:XP_002268160.2	SEG:seg

Description

No Description!

Coordinates

chr7:+:11795348..11800270

Molecular Weight (calculated)

100270.0 Da

IEP (calculated)

5.738

GRAVY (calculated)

-0.041

Length

905 amino acids

Sequence
(BLAST)

001: MDTVCFWVCF FLLFWLGNVG FCYQDGFLSL SCGATADFVD STNISWVSDS TYVDTGNTTT IDFIEGTSSS HVPIRFFPDS KGRKCYRLPV KNVSSVVLVR
101: TQFVYKNYDG LAKPPAFSVS LGTAITTTAN LTVSDPWTEE FVWSVNQDIL PLCLHALPGG GVPVISSLEV RPLPQRAYTS GMEDFPNKSL RKCYRINCGY
201: ANGSLRYPLD SYDRIWDADQ SFSPFHLSTG FNIQLSFNLS SIEESPPLAV LQTARVLARR DALAYYFPLD KLGDYYIVLY FAGILPVSPT FDVLINGDVV
301: WSSYTVKNSE ATALFFTRKG IKSLSITLKN ISFNPLINAI EVYEMVDIPS ETSSTTVSAL QVIQQSTGLD LGWQDDPCSP TPWDHISCQG SLVTSLGLPN
401: INLRSISPTF GDLLDLRTLD LHNTSLTGKI QNLDSLQHLE KLNLSFNQLT SFGSDLENLI SLQILDLQNN SLEGTVPESL GELKDLHLLN LENNKLQGTL
501: PDSLNRESLE VRSSGNLCLS FSISTCSEVP SNPSIETPQV TIFNKKQHDD HNLRTIILGA VGGVLFAVIV TSLLVFLYMR RKRTEVTYSE RAGVDMRNWN
601: AAARIFSHKE IKAATNNFKE VIGRGSFGSV YIGKLPDGKL VAVKVRFDRT QLGADSFINE VHLLSQIRHQ NLVSLEGFCH ESKQQILVYE YLPGGSLADN
701: LYGANGRRIT LSWVRRLKIA VDAAKGLDYL HNGSNPRIIH RDVKCSNILL DMEMNAKVCD FGLSKQVTQA DATHVTTVVK GTAGYLDPEY YSTQQLTEKS
801: DVYSFGVVLL ELICGREPLS HSGTPDSFNL VLWAKPYLQA GAFEIVDESI KGNFDVESMR KAALIASRSV ERDAAQRPVM AEVLAELKEA YSIQLSYLAS
901: CGHLN

Best Arabidopsis Sequence Match ( AT5G48740.1 )
(BLAST)

001: MLFWVLLSSF CVFCFSSPDG FLSLSCGGSS YTAAYNISWV SDNDYIETGN TTTVTYAEGN STSSVPIRLF PDPQGRQCYK LPVRKDLSSV LIRATFVYRN
101: YDSQNSPPAF HVSLGRRITS TVDLRTNDPW IEELVWPVNN DSLLLCLLAV KGRGIPVISS LEVRPLPLGS YKYSLEGSPD IILRRSYRIN SGYTNGTIRY
201: PSDPFDRIWD PDQSYSPFHA SWSFNGLTKL NSFNITENPP ASVLKTARIL ARKESLSYTL SLHTPGDYYI ILYFAGILSL SPSFSVTIND EVKQSDYTVT
301: SSEAGTLYFT QKGISKLNIT LRKIKFNPQV SALEVYEILQ IPPEASSTTV SALKVIEQFT GQDLGWQDDP CTPLPWNHIE CEGNRVTSLF LSKINLRSIS
401: PTFGDLLDLK TLDLHNTSLT GAIQNVGSLK DLQKLNLSFN QLESFGSELE DLVNLEVLDL QNNSLQGSVP ETLGKLKKLR LLNLENNNLV GPLPQSLNIT
501: GLEVRITGNP CLSFSSISCN NVSSTIDTPQ VTIPINKKQR KQNRIAILLG VSGGALFATF LVFVFMSIFT RRQRNKERDI TRAQLKMQNW NASRIFSHKE
601: IKSATRNFKE VIGRGSFGAV YRGKLPDGKQ VAVKVRFDRT QLGADSFINE VHLLSQIRHQ NLVSFEGFCY EPKRQILVYE YLSGGSLADH LYGPRSKRHS
701: LNWVSRLKVA VDAAKGLDYL HNGSEPRIIH RDVKSSNILL DKDMNAKVSD FGLSKQFTKA DASHITTVVK GTAGYLDPEY YSTLQLTEKS DVYSFGVVLL
801: ELICGREPLS HSGSPDSFNL VLWARPNLQA GAFEIVDDIL KETFDPASMK KAASIAIRCV GRDASGRPSI AEVLTKLKEA YSLQLSYLAA SAHTD

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At5g48740 [Source:UniProtKB/Swiss-Prot;Acc:C0LGV0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.