Factsheet for PGSC0003DMT400045511

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

nucleus 2
cytosol 1
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g060110.2.1	Tomato	plasma membrane, vacuole	96.79	96.79
VIT_07s0005g06500.t01	Wine grape	plasma membrane	74.11	74.03
KRH07483	Soybean	plasma membrane	67.59	65.07
Bra037463.1-P	Field mustard	plasma membrane	64.05	64.4
CDX85361	Canola	plasma membrane	64.05	64.4
AT5G48740.1	Thale cress	plasma membrane	63.27	63.91
CDX86282	Canola	plasma membrane	62.83	62.35
GSMUA_Achr3P19480_001	Banana	mitochondrion, plasma membrane, plastid, vacuole	62.83	59.66
PGSC0003DMT400078790	Potato	plastid	26.11	32.37
PGSC0003DMT400027924	Potato	cytosol, plasma membrane, plastid	30.53	31.54
PGSC0003DMT400004363	Potato	plasma membrane	31.31	30.5

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102586519	MapMan:18.4.1.1	Gene3D:2.60.120.430	Gene3D:3.30.200.20	Gene3D:3.80.10.10
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	UniProt:M1BHS6	InterPro:Malectin-like_Carb-bd_dom	PFAM:PF00069
PFAM:PF12819	EnsemblPlantsGene:PGSC0003DMG401017656	PGSC:PGSC0003DMG401017656	EnsemblPlants:PGSC0003DMT400045511	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF248	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000296C7B4
RefSeq:XP_006356776.1	SEG:seg	:	:	:	:

Description

Kinase [Source:PGSC_GENE;Acc:PGSC0003DMG401017656]

Coordinates

chr9:-:43843155..43847963

Molecular Weight (calculated)

101139.0 Da

IEP (calculated)

6.114

GRAVY (calculated)

-0.091

Length

904 amino acids

Sequence
(BLAST)

001: MELHWCYYSW FLLSSIFIKV AFCDPEGFLS LSCGGNTTYV DSSNITWTPD GAYISAGNMT TVDFLEGSSS STLPVRFFSD SPRRKCYKIP VKNVSSLVLV
101: RTQFVYKNYD GHNKPPAFSV SLGRAITTNV NLTHIDPWIE EFIWPVDKDI LSLCFHSLQD GGFPVISSLE LRPLPQEAYS NALGDFPNKL LRKCYRINCG
201: YNWSLRYPID KYDRIWDADE DFSPFHVSSG FDIQANFNMT VLKENPPAAV LQTGRVLARW SDMTYKFPID HQGDYHIVLY FAGILPVSPS FDVLINGHVV
301: RSNYTVNRWE VSSLFFTMKG IESLNITLKT VHYYPYINAL EVYEILDIPL ETSSTTVSAL QVIHQSTGLD LDWEDDPCSP KSWEHIECEA NLVTSLELFD
401: VNLRSISPTF GDLLDLKSLD LHNTSLAGEI QNIGSLQHLK KLNLSFNQLT AFGSELEDLI NLQILDLHNN SFQGTVPDSV GELKDLHLLN LENNKLQGPL
501: PQSLNRESLQ VLSSGNLCLS FTMSLCNEFS RNPTIETPQV TVFAPIKHKR HNRFIVILGA VGGAVFVLFV VFISVLLYMR RRKSGDTYAS RTAAEMKNWN
601: AAKVFSYKEI KAATNNFKEV IGRGSFGSVY LGKLPDGKQV AVKVRFDKTQ LGADSFINEV SLLSQISHPT LVSLEGFCHE SKQQILVYEY LPGGSLADNL
701: YGAMSKKLTL SWVRRLKIAV DAAKGLDYLH NGSEPRIIHR DVKSSNILLD ADINAKVSDF GLSKQVTQSD ATHVSTVVKG TAGYLDPEYY STRQLTEKSD
801: IYSFGVVLLE LICGREPLSH SGSPDSFNLV LWAKPYLQAG AFEIVDESIK GTFDTESMRK AALIASRSVE RDALRRPSIA EVLAELKDAY SIQLSYLASE
901: GLAN

Best Arabidopsis Sequence Match ( AT5G48740.1 )
(BLAST)

001: MLFWVLLSSF CVFCFSSPDG FLSLSCGGSS YTAAYNISWV SDNDYIETGN TTTVTYAEGN STSSVPIRLF PDPQGRQCYK LPVRKDLSSV LIRATFVYRN
101: YDSQNSPPAF HVSLGRRITS TVDLRTNDPW IEELVWPVNN DSLLLCLLAV KGRGIPVISS LEVRPLPLGS YKYSLEGSPD IILRRSYRIN SGYTNGTIRY
201: PSDPFDRIWD PDQSYSPFHA SWSFNGLTKL NSFNITENPP ASVLKTARIL ARKESLSYTL SLHTPGDYYI ILYFAGILSL SPSFSVTIND EVKQSDYTVT
301: SSEAGTLYFT QKGISKLNIT LRKIKFNPQV SALEVYEILQ IPPEASSTTV SALKVIEQFT GQDLGWQDDP CTPLPWNHIE CEGNRVTSLF LSKINLRSIS
401: PTFGDLLDLK TLDLHNTSLT GAIQNVGSLK DLQKLNLSFN QLESFGSELE DLVNLEVLDL QNNSLQGSVP ETLGKLKKLR LLNLENNNLV GPLPQSLNIT
501: GLEVRITGNP CLSFSSISCN NVSSTIDTPQ VTIPINKKQR KQNRIAILLG VSGGALFATF LVFVFMSIFT RRQRNKERDI TRAQLKMQNW NASRIFSHKE
601: IKSATRNFKE VIGRGSFGAV YRGKLPDGKQ VAVKVRFDRT QLGADSFINE VHLLSQIRHQ NLVSFEGFCY EPKRQILVYE YLSGGSLADH LYGPRSKRHS
701: LNWVSRLKVA VDAAKGLDYL HNGSEPRIIH RDVKSSNILL DKDMNAKVSD FGLSKQFTKA DASHITTVVK GTAGYLDPEY YSTLQLTEKS DVYSFGVVLL
801: ELICGREPLS HSGSPDSFNL VLWARPNLQA GAFEIVDDIL KETFDPASMK KAASIAIRCV GRDASGRPSI AEVLTKLKEA YSLQLSYLAA SAHTD

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At5g48740 [Source:UniProtKB/Swiss-Prot;Acc:C0LGV0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.