Factsheet for GSMUA_Achr3P19480_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, plastid, vacuole

Predictor Summary:

plastid 3
vacuole 1
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0005g06500.t01	Wine grape	plasma membrane	60.5	63.65
PGSC0003DMT400045511	Potato	plasma membrane, vacuole	59.66	62.83
Solyc09g060110.2.1	Tomato	plasma membrane, vacuole	59.03	62.17
AT5G48740.1	Thale cress	plasma membrane	54.41	57.88
Bra037463.1-P	Field mustard	plasma membrane	54.62	57.84
CDX85361	Canola	plasma membrane	54.52	57.73
KRH07483	Soybean	plasma membrane	55.46	56.23
CDX86282	Canola	plasma membrane	53.26	55.65
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, plastid	8.93	36.96
GSMUA_Achr6P26480_001	Banana	cytosol	9.98	35.98
GSMUA_Achr4P15390_001	Banana	plasma membrane	19.75	34.12
GSMUA_Achr8P17390_001	Banana	cytosol	23.11	32.02
GSMUA_Achr9P05980_001	Banana	plasma membrane	9.87	31.76
GSMUA_Achr4P15380_001	Banana	cytosol, nucleus, plasma membrane	4.94	31.76
GSMUA_Achr9P09200_001	Banana	plasma membrane	20.38	30.84
GSMUA_Achr6P34450_001	Banana	plasma membrane, vacuole	29.31	30.39
GSMUA_Achr6P33110_001	Banana	plasma membrane	27.94	29.1
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular	5.99	27.94

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr3G19480_001	EnsemblPlants:GSMUA_Achr3P19480_001	EnsemblPlants:GSMUA_Achr3T19480_001	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675
InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M0SG14	InterPro:Malectin-like_Carb-bd_dom
PFAM:PF07714	PFAM:PF12819	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51450
PANTHER:PTHR27003	PANTHER:PTHR27003:SF248	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00369
SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0002955710
SEG:seg	:	:	:	:	:

Description

Probable LRR receptor-like serine/threonine-protein kinase At5g48740 [Source:GMGC_GENE;Acc:GSMUA_Achr3G19480_001]

Coordinates

chr3:-:20845758..20855316

Molecular Weight (calculated)

105533.0 Da

IEP (calculated)

6.510

GRAVY (calculated)

-0.020

Length

952 amino acids

Sequence
(BLAST)

001: MPSWLMLTSS YLACTRPGFL SLSCGGSTSF VDSGNNISWV PDGPYVTAGN ATAANFVQGG STSQLPLRFF ADSGPGSRAC FRLPVGNLPL VLVRPRFVYG
101: NYDGMHRPPV FAVSLGRAIA GFVNLSQADP WVEEFVWRRE KGAALPFCLH SVAGGGSPVI SSLEVRPLPE GAYGTRLQEF GDNLLRKRFR INCGYVDDEP
201: LRYPLDYHDR LWDADEGFSP SHLAAAFHIP VSFDLTGIKE NPPASVLQTA RVLARKTALT YNFPLDKLGD YYVALYFAGI MPVSSSFDVL INGDVVHSDY
301: TVEHGKVGSI FFMGKKIESL NITFRNNSFY PQVNGIEIYE VLEVPVECST TTVSALQVIR QSTGFDFGWE DDPCSPKPWM HVGCDGNLVT SLKLSDMDLG
401: AITPTFGDLL DLKILDLHNT SIAGEITNLG TLQKLEILNL SFNKLTSFGS DFNTMVSLQI LDLHNNSLEG AVPDGLGSLN YLHLLNLENN RLHGVLPQSL
501: KKERLEVRTS GNLCLSFSSM CNNFSNHPSI PTPQVTVFDM ERPLHSNRKT VIIAIATIGS VCFAILLILL AMIVQRRRRK EDDVISRTYT AREMQRWSAA
601: RIFSYKEIKA ATNNFRDVIG SGGFGSVYLG KLSDGKLVAV KVRLDKTQLG ADSFFNEVNI HKILSMITLE SPIAINYESF SFLFIKLLVL LYSKFTFHFL
701: KFYSLDLQVH LLSQVRHQNL VSLEGFCHES KQQILVYEYL PGGSLADNLY GSNSKRATLN WARRLKIAVD AAKGLDYLHN GSNPRIIHRD VKCSNILLDA
801: EINAKVSDFG LSKQVLQVDA THVTTAVKGT AGYLDPEYYA TQQLTEKSDV YSFGVVLLEM ICGREPLNGM FWILKNEHEV VYDTMDGMTD SFEIVDENIK
901: GAFNPESMKK AASVAIRCVE RDASHRPTIA EVLAELKEAY SIQLTSMSSE AT

Best Arabidopsis Sequence Match ( AT5G48740.1 )
(BLAST)

001: MLFWVLLSSF CVFCFSSPDG FLSLSCGGSS YTAAYNISWV SDNDYIETGN TTTVTYAEGN STSSVPIRLF PDPQGRQCYK LPVRKDLSSV LIRATFVYRN
101: YDSQNSPPAF HVSLGRRITS TVDLRTNDPW IEELVWPVNN DSLLLCLLAV KGRGIPVISS LEVRPLPLGS YKYSLEGSPD IILRRSYRIN SGYTNGTIRY
201: PSDPFDRIWD PDQSYSPFHA SWSFNGLTKL NSFNITENPP ASVLKTARIL ARKESLSYTL SLHTPGDYYI ILYFAGILSL SPSFSVTIND EVKQSDYTVT
301: SSEAGTLYFT QKGISKLNIT LRKIKFNPQV SALEVYEILQ IPPEASSTTV SALKVIEQFT GQDLGWQDDP CTPLPWNHIE CEGNRVTSLF LSKINLRSIS
401: PTFGDLLDLK TLDLHNTSLT GAIQNVGSLK DLQKLNLSFN QLESFGSELE DLVNLEVLDL QNNSLQGSVP ETLGKLKKLR LLNLENNNLV GPLPQSLNIT
501: GLEVRITGNP CLSFSSISCN NVSSTIDTPQ VTIPINKKQR KQNRIAILLG VSGGALFATF LVFVFMSIFT RRQRNKERDI TRAQLKMQNW NASRIFSHKE
601: IKSATRNFKE VIGRGSFGAV YRGKLPDGKQ VAVKVRFDRT QLGADSFINE VHLLSQIRHQ NLVSFEGFCY EPKRQILVYE YLSGGSLADH LYGPRSKRHS
701: LNWVSRLKVA VDAAKGLDYL HNGSEPRIIH RDVKSSNILL DKDMNAKVSD FGLSKQFTKA DASHITTVVK GTAGYLDPEY YSTLQLTEKS DVYSFGVVLL
801: ELICGREPLS HSGSPDSFNL VLWARPNLQA GAFEIVDDIL KETFDPASMK KAASIAIRCV GRDASGRPSI AEVLTKLKEA YSLQLSYLAA SAHTD

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At5g48740 [Source:UniProtKB/Swiss-Prot;Acc:C0LGV0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.