Factsheet for VIT_09s0002g02870.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g02710.t01	Wine grape	cytosol	50.83	51.91
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, plastid	45.42	47.39
GSMUA_Achr6P26480_001	Banana	cytosol	49.58	45.08
GSMUA_Achr4P15380_001	Banana	cytosol, nucleus, plasma membrane	26.67	43.24
Os09t0358000-00	Rice	cytosol	22.92	39.86
GSMUA_Achr9P05980_001	Banana	plasma membrane	47.5	38.51
VIT_09s0002g02900.t01	Wine grape	cytosol	45.0	36.73
TraesCS1B01G358500.1	Wheat	cytosol	42.5	32.08
VIT_00s0211g00040.t01	Wine grape	cytosol	26.25	31.66
HORVU4Hr1G079270.1	Barley	cytosol	42.5	29.39
VIT_09s0002g02890.t01	Wine grape	cytoskeleton, cytosol, plastid	50.83	27.17
TraesCS1D01G033400.1	Wheat	cytosol	42.08	26.17
TraesCS6D01G120500.1	Wheat	cytosol	10.42	21.74
GSMUA_Achr4P15390_001	Banana	plasma membrane	48.33	21.05
TraesCS1D01G347300.1	Wheat	cytosol, plasma membrane, plastid	28.75	16.27
TraesCS1B01G039600.1	Wheat	plastid	43.75	11.97
TraesCS1B01G358400.1	Wheat	plasma membrane	44.17	11.31
VIT_01s0010g02210.t01	Wine grape	plasma membrane	41.67	10.8
VIT_09s0002g02840.t01	Wine grape	cytoskeleton, cytosol, nucleus	52.08	10.68
VIT_07s0005g06500.t01	Wine grape	plasma membrane	40.0	10.61
VIT_08s0040g03140.t01	Wine grape	plasma membrane	40.83	10.61
VIT_00s0211g00030.t01	Wine grape	plasma membrane	5.83	1.95

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	ProteinID:CCB59381	ProteinID:CCB59381.1	UniProt:F6HY58	EMBL:FN596494
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF105	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000210A770	ArrayExpress:VIT_09s0002g02870	EnsemblPlantsGene:VIT_09s0002g02870
EnsemblPlants:VIT_09s0002g02870.t01	RefSeq:XP_002276980	RefSeq:XP_002276980.1	:	:	:

Description

No Description!

Coordinates

chr9:+:2628293..2630417

Molecular Weight (calculated)

26446.4 Da

IEP (calculated)

6.085

GRAVY (calculated)

-0.269

Length

240 amino acids

Sequence
(BLAST)

001: MANGNLREHL SGAGKDTPVL SWEQRLQIAV DAAQAFEYLH EGCKPPIIHR DVKTSNILLD GKLQAKVADF GLSRFMPSES RTIVSTQVAG TPGYLDPEYY
101: ISNNLNEKSD VYAFGIVLLE LVTGHPAIIP GHENTHLVDW LSPRLAGGEI RSIVDSRLNG DFNPNSAWKL VETAMACVPR SSIQRPTMSQ VVADLKECLQ
201: MEMHRNKSAS QSRTYQDTAS SANSIDLFAV ELDVSMPHAR

Best Arabidopsis Sequence Match ( AT1G51800.1 )
(BLAST)

001: MAFSSCFLLV LLQIFSALLL CLAQDQSGFI SLDCGSPRET SFREKTTNIT YISDANFINT GVGGSIKQGY RTQFQQQTWN LRSFPQGIRN CYTLNLTIGD
101: EYLIRANFLH GGYDDKPSTQ FELYLGPNLW STVTTTNETE ASIFEMIHIL TTDRLQICLV KTGNATPFIS ALELRKLMNT TYLTRQGSLQ TFIRADVGAT
201: VNQGYRYGID VFDRVWTPYN FGNWSQISTN QSVNINNDYQ PPEIAMVTAS VPTDPDAAMN ISLVGVERTV QFYVFMHFAE IQELKSNDTR EFNIMYNNKH
301: IYGPFRPLNF TTSSVFTPTE VVADANGQYI FSLQRTGNST LPPLLNAMEI YSVNLLPQQE TDRKEVDAMM NIKSAYGVNK IDWEGDPCVP LDYKWSGVNC
401: TYVDNETPKI ISLDLSTSGL TGEILEFISD LTSLEVLDLS NNSLTGSVPE FLANMETLKL INLSGNELNG SIPATLLDKE RRGSITLSIE GNTGLCSSTS
501: CATTKKKKKN TVIAPVAASL VSVFLIGAGI VTFLILKRKK RTKLGLNPNS GTGTTPLHSR SHHGFEPPVI AKNRKLTYID VVKITNNFER VLGRGGFGVV
601: YYGVLNNEPV AVKMLTESTA LGYKQFKAEV ELLLRVHHKD LTCLVGYCEE GDKMSLIYEF MANGDLKEHL SGKRGPSILT WEGRLRIAAE SAQGLEYLHN
701: GCKPQIVHRD IKTTNILLNE KFQAKLADFG LSRSFPLGTE THVSTIVAGT PGYLDPEYYR TNWLTEKSDV FSFGVVLLEL VTNQPVIDMK REKSHIAEWV
801: GLMLSRGDIN SIVDPKLQGD FDPNTIWKVV ETAMTCLNPS SSRRPTMTQV VMDLKECLNM EMARNMGSRM TDSTNDSSIE LSMNFTTELN PGAR

Arabidopsis Description

IOS1LRR receptor-like serine/threonine-protein kinase IOS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8I6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.