Factsheet for TraesCS1B01G039600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G033400.1	Wheat	cytosol	33.52	76.17
TraesCS1B01G358500.1	Wheat	cytosol	25.88	71.38
TraesCS1B01G358400.1	Wheat	plasma membrane	61.23	57.31
CDX87851	Canola	cytosol	13.91	54.71
CDY72115	Canola	cytosol	13.8	52.16
GSMUA_Achr6P26480_001	Banana	cytosol	15.39	51.14
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, plastid	12.88	49.13
CDY39524	Canola	cytosol	12.54	49.11
Bra030691.1-P	Field mustard	cytosol	17.1	48.7
HORVU4Hr1G079270.1	Barley	cytosol	18.7	47.26
GSMUA_Achr9P05980_001	Banana	plasma membrane	15.51	45.95
CDX91466	Canola	cytosol	13.8	45.32
VIT_09s0002g02710.t01	Wine grape	cytosol	12.09	45.11
CDX76454	Canola	cytosol	17.45	44.61
Bra019480.1-P	Field mustard	cytosol	15.51	43.87
VIT_09s0002g02870.t01	Wine grape	cytosol	11.97	43.75
KRH44235	Soybean	cytosol	10.72	43.72
CDY21773	Canola	cytosol, nucleus, plasma membrane	14.48	43.64
Os09t0358000-00	Rice	cytosol	6.84	43.48
CDY19842	Canola	cytosol	16.31	43.47
AT3G46410.1	Thale cress	cytosol	14.37	43.3
AT3G46355.1	Thale cress	cytosol	14.25	42.96
CDX68373	Canola	cytosol, nucleus, plasma membrane	14.25	42.52
CDY42327	Canola	cytosol	15.62	41.39
CDY00634	Canola	plastid	18.13	40.87
CDY07242	Canola	plastid	17.33	40.75
CDY02705	Canola	cytosol	8.21	40.22
CDY22854	Canola	mitochondrion	14.14	39.87
KRH44241	Soybean	plasma membrane, plastid	19.38	39.44
CDY65586	Canola	cytosol	7.98	38.67
Bra018919.1-P	Field mustard	plasma membrane	11.17	37.69
Bra002545.1-P	Field mustard	plastid	13.23	37.66
CDX88716	Canola	plastid	12.09	37.46
AT1G51620.2	Thale cress	cytosol	14.25	37.2
KRH44228	Soybean	plastid	19.27	36.98
VIT_09s0002g02900.t01	Wine grape	cytosol	12.31	36.73
AT2G28960.2	Thale cress	plasma membrane	36.6	36.48
AT1G51910.1	Thale cress	plasma membrane	36.37	36.42
CDY55667	Canola	plastid	14.37	36.0
CDY33849	Canola	plasma membrane	36.15	35.94
Bra030415.1-P	Field mustard	plasma membrane	28.05	35.91
VIT_09s0002g02890.t01	Wine grape	cytoskeleton, cytosol, plastid	18.36	35.86
AT3G45920.1	Thale cress	cytosol	7.75	35.42
TraesCS5B01G154600.2	Wheat	plasma membrane	31.7	30.15
CDX68371	Canola	plasma membrane	29.99	29.82
TraesCS3B01G603800.1	Wheat	plasma membrane	31.01	27.98
TraesCS2B01G227700.1	Wheat	plasma membrane	18.47	27.6
VIT_09s0002g02840.t01	Wine grape	cytoskeleton, cytosol, nucleus	21.44	16.07

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	InterPro:Malectin-like_Carb-bd_dom	PFAM:PF07714	PFAM:PF12819	PFAM:PF13855
PRINTS:PR00019	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27003
PANTHER:PTHR27003:SF247	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00369	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1B01G039600	EnsemblPlants:TraesCS1B01G039600.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:19047408..19051551

Molecular Weight (calculated)

96823.8 Da

IEP (calculated)

6.561

GRAVY (calculated)

-0.265

Length

877 amino acids

Sequence
(BLAST)

001: MNYNISAEYL GFSRRGHNLR SFPDGVRNCY TLRSLVSGLK YLIRAGFLYG NYDGLNRPPA SFDLHIGVNF WKTVNMSTWG ADQGNTATVE AIIVVPNDLL
101: QVCLVNTGSG TPFISSLDLR PLKRTFYPQA TAEQGLVMLA RLNAAPVNKT GTIRYPDDPH DRLWYPWFDA TIWAEISTTE RVYGVGDDLF EVPWKVMQTA
201: IVTRNTSKNI WFGWESLDAE PRDDDPSRPG YVAILHFAEL QLLNASNGEL RQFYINLNDE LAYPTGFTPE HLVSNAIYDT KPSRHSGYNF SINATANSTL
301: PPILNAVEVY YVIPTTNLGT DSQDASAAMV IKAKYGVRKN WMGDPCFPRT MAWDGLNCSY AAANPPRITS INLSSSGLKS DISSSFTHLK ALQYLDLSNN
401: NLTGSIPDAL SQLSSLTVID LSGNQLNGSI PSGLLKRIQD GSLDLRHGNN PNMCTDGNSC QLAAIRKSKL AIYVAVPILV VIVSVSLLVL FFLRRRNQQK
501: GSMKNRTTVK PQNEEAMSTS YGGDDDSLRL VENRRFTYEE LERITNGFDR VLGQGGFGYV YDGFLEDGTQ VAVKLRSHSS NQGVKEFLAE AQILTRIHHK
601: NLVSMIGYCK DGEYMALVYE YMAQGTLREH IAGSGRTGGC LPWRQRLKNA LEPAQGLEYL HMGCNPPLIH RDVKATNILL NARLEAKIAD FGLTKAFDYH
701: NNTLLFTNTL AFTPGYVDPE YQATMQPTTK SDVYSFGVVL LELVTGKPAI LSDPEPTSIV LWARQRLARG NMEGVVDARM QGGYDINGVW KVAEIALKCT
801: TQGSAQRPTM ADVVTQLQEC VELEEGRAPS FHTGGSSGDD NHNAYGSAQS TNVSSNTAFE TELRIPTVAT DPGPTAR

Best Arabidopsis Sequence Match ( AT1G51850.2 )
(BLAST)

001: MERHCVLVAT FLLMLHIVHA QDQIGFISVD CGLAPRESPY NEAKTGLTYT SDDGLVNVGK PGRIAKEFEP LADKPTLTLR YFPEGVRNCY NLNVTSDTNY
101: LIKATFVYGN YDGLNVGPNF DLYFGPNLWT TVSSNDTIKE IIHVTKTNSL QVCLIKTGIS IPFINVLELR PMKKNMYVTQ GESLNYLFRV YISNSSTRIR
201: FPDDVYDRKW YPYFDNSWTQ VTTTLDVNTS LTYELPQSVM AKAATPIKAN DTLNITWTVE PPTTKFYSYM HFAELQTLRA NDAREFNVTM NGIYTYGPYS
301: PKPLKTETIY DKIPEQCDGG ACLLQVVKTL KSTLPPLLNA IEAFTVIDFP QMETNGDDVD AIKNVQDTYG ISRISWQGDP CVPKLFLWDG LNCNNSDNST
401: SPIITSLDLS SSGLTGSITQ AIQNLTNLQE LDLSDNNLTG EIPDFLGDIK SLLVINLSGN NLSGSVPPSL LQKKGMKLNV EGNPHLLCTA DSCVKKGEDG
501: HKKKSVIVPV VASIASIAVL IGALVLFFIL RKKKSPKVEG PPPSYMQASD GRSPRSSEPA IVTKNRRFTY SQVAIMTNNF QRILGKGGFG MVYHGFVNGT
601: EQVAVKILSH SSSQGYKEFK AEVELLLRVH HKNLVGLVGY CDEGENMALI YEYMANGDLK EHMSGTRNRF TLNWGTRLKI VVESAQGLEY LHNGCKPPMV
701: HRDVKTTNIL LNEHFQAKLA DFGLSRSFPI EGETHVSTVV AGTPGYLDPE YYKTNWLTEK SDVYSFGIVL LELITNRPVI DKSREKPHIA EWVGVMLTKG
801: DINSIMDPNL NEDYDSGSVW KAVELAMSCL NPSSARRPTM SQVVIELNEC IASENSRGGA SRDMDSKSSI EVSLTFDTEL SPTAR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:TAIR;Acc:AT1G51850]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.