CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65586	Canola	cytosol	44.52	69.61
CDY42327	Canola	cytosol	74.2	63.44
CDY02705	Canola	cytosol	36.75	58.1
CDY21773	Canola	cytosol, nucleus, plasma membrane	59.72	58.08
CDX68373	Canola	cytosol, nucleus, plasma membrane	60.07	57.82
CDX91466	Canola	cytosol	51.94	55.06
CDX87851	Canola	cytosol	40.99	52.02
CDY39524	Canola	cytosol	39.58	50.0
VIT_09s0002g02710.t01	Wine grape	cytosol	40.99	49.36
CDY72115	Canola	cytosol	40.28	49.14
KRH44235	Soybean	cytosol	36.04	47.44
CDX76454	Canola	cytosol	56.89	46.94
CDY19842	Canola	cytosol	51.94	44.68
GSMUA_Achr6P26480_001	Banana	cytosol	40.99	43.94
Bra002545.1-P	Field mustard	plastid	47.35	43.51
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, plastid	35.34	43.48
CDY07242	Canola	plastid	52.65	39.95
GSMUA_Achr4P15380_001	Banana	cytosol, nucleus, plasma membrane	20.85	39.86
CDY00634	Canola	plastid	54.06	39.33
Os09t0358000-00	Rice	cytosol	19.08	39.13
GSMUA_Achr9P05980_001	Banana	plasma membrane	37.46	35.81
CDY22854	Canola	mitochondrion	38.87	35.37
TraesCS1B01G358500.1	Wheat	cytosol	38.16	33.96
HORVU4Hr1G079270.1	Barley	cytosol	40.99	33.43
CDY55667	Canola	plastid	37.1	30.0
KRH44241	Soybean	plasma membrane, plastid	44.52	29.23
TraesCS1D01G033400.1	Wheat	cytosol	37.1	27.2
KRH44228	Soybean	plastid	43.46	26.91
GSMUA_Achr4P15390_001	Banana	plasma membrane	42.76	21.96
CDX68371	Canola	plasma membrane	57.24	18.37
TraesCS6D01G120500.1	Wheat	cytosol	7.07	17.39
CDY33849	Canola	plasma membrane	50.88	16.33
TraesCS1D01G347300.1	Wheat	cytosol, plasma membrane, plastid	22.97	15.33
CDX74990	Canola	plasma membrane	41.34	12.76
CDX79713	Canola	plasma membrane	41.7	12.65
CDX91333	Canola	plasma membrane	41.34	12.57
CDY46751	Canola	plasma membrane	41.34	12.55
TraesCS1B01G039600.1	Wheat	plastid	37.46	12.09
TraesCS1B01G358400.1	Wheat	plasma membrane	39.22	11.85
CDX85361	Canola	plasma membrane	36.04	11.35
CDX86282	Canola	plasma membrane	36.04	11.2
CDY01841	Canola	plasma membrane	38.87	10.79
CDX96066	Canola	plasma membrane	38.87	10.71

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:A0A078DHJ0	EnsemblPlants:CDX88716	ProteinID:CDX88716
ProteinID:CDX88716.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00148766001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF44
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EF3109	:

Description

BnaA03g09330D

Coordinates

chrLK031856:+:648946..650387

Molecular Weight (calculated)

31394.6 Da

IEP (calculated)

6.846

GRAVY (calculated)

-0.277

Length

283 amino acids

Sequence
(BLAST)

001: MRRYTSNPNF PPPLRAFVQQ INTRRVDLLL RVHHTHLVSL VGYCYEGDNL ALVYEFLSNG DLKQHLSGKG GRSIINWSTR LQIALEAASG LEYLHIGCTP
101: PMVHRDIKTA NILLDENLKA KLADFGLSRS FQGGGESHDT AVAGTLGYLD PEYNHSGRLG EKSDVYSFGI VLLEMITNQP VINQTSNNSH ITQCVGFKLN
201: RGDIAEIMDP NLHKDYDFNS AWRALELAMS CANPSSSKRP SMSQVINEIK ECLVCAKSGI GKNLELEPQE IMSSDTSMVP MAR

Best Arabidopsis Sequence Match ( AT5G59650.1 )
(BLAST)

001: MDSPCWLLLL LLGAFAIIGC VQAQDQQEFI SLDCGLPMTE PSSYTESVTG LRFSSDAEFI QTGESGKIQA SMENDYLKPY TRLRYFPEER RNCYSLSVDK
101: NRKYLIRARF IYGNYDGRNS NPIFELHLGP NLWATIDLQK FVNGTMEEIL HTPTSNSLNV CLVKTGTTTP LISALELRPL GNNSYLTDGS LNLFVRIYLN
201: KTDGFLRYPD DIYDRRWHNY FMVDDWTQIF TTLEVTNDNN YEPPKKALAA AATPSNASAP LTISWPPDNP GDQYYLYSHF SEIQDLQTND TREFDILWDG
301: AVVEEGFIPP KLGVTTIHNL SPVTCKGENC IYQLIKTSRS TLPSLLNALE IYTVIQFPRS ETNENDVVAV KNIEAAYKLS RIRWQGDPCV PQKYAWDGLN
401: CSNNTDVSKP PRVLSLNLSS SGLTGIIAAA IQNLTHLEKL DLSNNTLTGV VPEFLAQMKS LVIINLSGNN LSGPLPQGLR REGLELLVQG NPRLCLSGSC
501: TEKNSKKKFP VVIVASVASV AIIVAVLVII FVLSKKKSST VGALQPPLSM PMVHDNSPEP SIETKKRRFT YSEVIKMTNN FQRVVGEGGF GVVCHGTING
601: SEQVAVKVLS QSSSQGYKHF KAEVDLLLRV HHTNLVSLVG YCDERDHLAL IYEFLPKGDL RQHLSGKSGG SFINWGNRLR IALEAALGLE YLHSGCTPPI
701: VHRDIKTTNI LLDEQLKAKL ADFGLSRSFP IGGETHISTV VAGTPGYLDP EYYQTTRLGE KSDVYSFGIV LLEIITNQPV IDQSRSKSHI SQWVGFELTR
801: GDITKIMDPN LNGDYESRSV WRVLELAMSC ANPSSVNRPN MSQVANELKE CLVSENLREN MNMDSQNSLK VSMSFDTELF PRAR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:TAIR;Acc:AT5G59650]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.