CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39524	Canola	cytosol	60.99	60.71
CDY72115	Canola	cytosol	60.09	57.76
CDX91466	Canola	cytosol	60.99	50.94
CDX68373	Canola	cytosol, nucleus, plasma membrane	64.57	48.98
CDY21773	Canola	cytosol, nucleus, plasma membrane	62.33	47.77
CDY19842	Canola	cytosol	70.4	47.72
CDX76454	Canola	cytosol	70.85	46.06
CDY02705	Canola	cytosol	34.53	43.02
CDY42327	Canola	cytosol	61.88	41.69
CDX88716	Canola	plastid	52.02	40.99
CDY65586	Canola	cytosol	33.18	40.88
VIT_09s0002g02710.t01	Wine grape	cytosol	42.6	40.43
KRH44235	Soybean	cytosol	37.22	38.6
TraesCS1B01G358500.1	Wheat	cytosol	53.81	37.74
CDY07242	Canola	plastid	60.99	36.46
GSMUA_Achr6P26480_001	Banana	cytosol	43.05	36.36
CDY00634	Canola	plastid	61.88	35.48
HORVU4Hr1G079270.1	Barley	cytosol	54.26	34.87
CDY22854	Canola	mitochondrion	48.43	34.73
KRH44241	Soybean	plasma membrane, plastid	61.88	32.02
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, plastid	32.74	31.74
TraesCS1D01G033400.1	Wheat	cytosol	53.81	31.09
CDY55667	Canola	plastid	48.43	30.86
KRH44228	Soybean	plastid	61.44	29.98
GSMUA_Achr9P05980_001	Banana	plasma membrane	39.01	29.39
Os09t0358000-00	Rice	cytosol	16.14	26.09
GSMUA_Achr4P15380_001	Banana	cytosol, nucleus, plasma membrane	16.59	25.0
GSMUA_Achr4P15390_001	Banana	plasma membrane	56.05	22.69
TraesCS1D01G347300.1	Wheat	cytosol, plasma membrane, plastid	37.67	19.81
CDY33849	Canola	plasma membrane	71.75	18.14
CDX68371	Canola	plasma membrane	63.23	15.99
TraesCS1B01G039600.1	Wheat	plastid	54.71	13.91
TraesCS1B01G358400.1	Wheat	plasma membrane	54.71	13.02
CDX74990	Canola	plasma membrane	49.33	12.0
CDX79713	Canola	plasma membrane	49.78	11.9
CDX91333	Canola	plasma membrane	49.33	11.82
CDY46751	Canola	plasma membrane	49.33	11.8
CDX85361	Canola	plasma membrane	43.95	10.9
CDX86282	Canola	plasma membrane	43.05	10.54
CDY01841	Canola	plasma membrane	47.53	10.4
CDX96066	Canola	plasma membrane	47.53	10.32
TraesCS6D01G120500.1	Wheat	cytosol	2.69	5.22

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:A0A078DF12	EnsemblPlants:CDX87851	ProteinID:CDX87851
ProteinID:CDX87851.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00147026001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003
PANTHER:PTHR27003:SF44	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EBA1D6	SEG:seg	:	:	:	:

Description

BnaC06g09130D

Coordinates

chrLK031852:-:688745..689866

Molecular Weight (calculated)

24979.8 Da

IEP (calculated)

6.598

GRAVY (calculated)

-0.301

Length

223 amino acids

Sequence
(BLAST)

001: MTNNFQRVLG KGGFGTVYHG NLDDAQVAVK MLSHSSAQGY KEFKAEVELL LRVHHRHLVG LVGYCDDGDN LALIYEYMAN GDLRENMSGL EYLHNGCRPP
101: MVHRDVKTTN ILLNDRSGAK LADFGLSRSF SIDGECHVST VVAGTPGYLD PEYYRTNWLS EKSDVYSFRV VLLEIVTNQP VIDKTRERPH INEWVGFMLT
201: KGDIRSIVDK LALGCVQGRS DTP

Best Arabidopsis Sequence Match ( AT1G51860.1 )
(BLAST)

001: MKSLHWFLHL LIIAFTVLRS VEAQNQAGFI SLDCGLVPKE TTYTEKSTNI TYKSDVDYID SGLVGKINDA YKTQFQQQVW AVRSFPVGQR NCYNVNLTAN
101: NKYLIRGTFV YGNYDGLNQF PSFDLHIGPN KWSSVKILGV TNTSMHEIIH VVPQDSLEVC LVKTGPTTPF ISSLEVRPLN NESYLTQSGS LMLFARVYFP
201: SSSSSFIRYD EDIHDRVWNS FTDDETVWIS TDLPIDTSNS YDMPQSVMKT AAVPKNASEP WLLWWTLDEN TAQSYVYMHF AEVQNLTANE TREFNITYNG
301: GLRWFSYLRP PNLSISTIFN PRAVSSSNGI FNFTFAMTGN STLPPLLNAL EIYTVVDILQ LETNKDEVSA MMNIKETYGL SKKISWQGDP CAPQLYRWEG
401: LNCSYPDSEG SRIISLNLNG SELTGSITSD ISKLTLLTVL DLSNNDLSGD IPTFFAEMKS LKLINLSGNP NLNLTAIPDS LQQRVNSKSL TLILGENLTL
501: TPKKESKKVP MVAIAASVAG VFALLVILAI FFVIKRKNVK AHKSPGPPPL VTPGIVKSET RSSNPSIITR ERKITYPEVL KMTNNFERVL GKGGFGTVYH
601: GNLDGAEVAV KMLSHSSAQG YKEFKAEVEL LLRVHHRHLV GLVGYCDDGD NLALIYEYMA NGDLRENMSG KRGGNVLTWE NRMQIAVEAA QGLEYLHNGC
701: RPPMVHRDVK TTNILLNERC GAKLADFGLS RSFPIDGECH VSTVVAGTPG YLDPEYYRTN WLSEKSDVYS FGVVLLEIVT NQPVIDKTRE RPHINDWVGF
801: MLTKGDIKSI VDPKLMGDYD TNGAWKIVEL ALACVNPSSN RRPTMAHVVM ELNDCVALEN ARRQGSEEMY SMGSVDYSLS STSDFAPGAR

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g51860 [Source:UniProtKB/Swiss-Prot;Acc:C0LGG4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.