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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra004249.1-P Field mustard cytosol 86.56 96.71
CDX96066 Canola plasma membrane 94.11 93.38
AT1G67720.1 Thale cress plasma membrane 82.63 90.64
KRG97489 Soybean plasma membrane 62.81 68.89
VIT_01s0010g02210.t01 Wine grape plasma membrane 62.51 68.79
PGSC0003DMT400027924 Potato cytosol, plasma membrane, plastid 58.98 68.69
KRH31393 Soybean plasma membrane 62.61 68.6
KRH42617 Soybean plasma membrane 62.12 67.85
Solyc05g014240.2.1 Tomato plasma membrane 61.53 67.71
KRH58723 Soybean plasma membrane 61.33 67.13
CDY39524 Canola cytosol 10.99 50.0
CDX74990 Canola plasma membrane 42.89 47.66
CDX79713 Canola plasma membrane 43.57 47.59
CDX87851 Canola cytosol 10.4 47.53
CDY46751 Canola plasma membrane 43.18 47.21
CDX91333 Canola plasma membrane 42.79 46.83
CDY72115 Canola cytosol 10.3 45.26
CDY21773 Canola cytosol, nucleus, plasma membrane 12.86 45.02
CDX91466 Canola cytosol 11.58 44.19
CDX68373 Canola cytosol, nucleus, plasma membrane 12.56 43.54
CDY19842 Canola cytosol 13.44 41.64
CDY02705 Canola cytosol 7.16 40.78
CDY42327 Canola cytosol 12.76 39.27
CDX88716 Canola plastid 10.79 38.87
CDX76454 Canola cytosol 13.05 38.78
CDY65586 Canola cytosol 6.67 37.57
CDY07242 Canola plastid 13.64 37.27
CDY00634 Canola plastid 14.13 37.02
CDY22854 Canola mitochondrion 11.19 36.66
CDY55667 Canola plastid 12.17 35.43
CDX85361 Canola plasma membrane 27.77 31.48
CDX86282 Canola plasma membrane 27.77 31.06
CDY33849 Canola plasma membrane 25.32 29.25
CDX68371 Canola plasma membrane 23.06 26.64
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.1Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078EL05EnsemblPlants:CDY01841
ProteinID:CDY01841ProteinID:CDY01841.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00113014001
InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfInterPro:Leu-rich_rpt
InterPro:Malectin-like_Carb-bd_domPFAM:PF07714PFAM:PF12819PFAM:PF13855ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR27003PANTHER:PTHR27003:SF82InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0004EE3753SEG:seg::::
Description
BnaC06g28810D
Coordinates
chrLK031929:-:783956..789749
Molecular Weight (calculated)
113379.0 Da
IEP (calculated)
7.922
GRAVY (calculated)
-0.218
Length
1019 amino acids
Sequence
(BLAST)
0001: MGLCSAQLAV TCFFIVLVPH ALSQVAEFIS IDCGGSSNYT DPKTGLGWVS DSEIIPQGKP VTLANTNSSS LQYTRRRDFP TDNKKYCYRL STKERRRYIV
0101: RTTFLYGSLG SEEAYPKFQL YLDATRWATV SVTEVNRVYV EELIVRATSS YVDVCVCCAI TGSPFMSTLE LRPLNLSMYA TDYEDNFFLK VAARVNFGAP
0201: SMDALRYPDD PYDRIWESDV NRRPNYLVGV APGTIRINTS KPVNTLTREY PPMKVMQTAV VGTQGLISYR LNLEDFPANA RAYAYFAEIE DLGANETRKF
0301: QLVQPYFPGY SNAVVNIAEN ANGSYTLYEP SYMNVTFDFV LSFSFGKTKD STRGPLLNAI EISKYLQISL KTDKNDVSVL DAIRSMSPGS DWANEGGDPC
0401: VPVLWSWISC SSTSPPRVTK IALSRKNIRG EFLPEINHME ALTELRLDGN GLTGVLPDLS KLVNLKIMHL ENNQLSGSLP AYLGHLPNLQ ELFIDNNSFR
0501: GTIPSALLKG KVLFKYNNNP ELQNEGKQKH YWLILGISIA AVAILLLLAG GGLVLLYVLR KKKSADKGNS TGTKKKGLAA YSAVRGGHLL DEGVAYFISL
0601: PILEEATDNF SKRVGKGSFG SVYYGRMKDG KEVAVKITAD PSSHLNRQFV TEVALLSRIH HRNLVPLIGY CEEADRRLLV YEYMHNGTLG DHLHGTSDYK
0701: PLDWPTRLQI AQDAAKGLEY LHTGCNPSII HRDVKSSNIL LDINMRAKVS DFGLSRQTEE DVTHVSSVAK GTVGYLDPEY YASQQLTEKS DVYSFGVVLF
0801: ELLSGKKPVS AEDFGPELNI VHWARSLIRK GDVYGIIDPC IVGNVKIESI WRVAEVANQC VEQRGHNRPR MQEVIVAIQE AVRIERGNEN GLKSSSSSSS
0901: KAQTSRKTLL TSFLEMESPD ISRNSLAPAA RFDLSQARSL IRKGDVYGII DPCIVGNVKI ESTWRVAELA NQCVEQRGHN RPRMQEVIVA IQEAVRIERG
1001: NENGLKVIEF EQLKGAIIS
Best Arabidopsis Sequence Match ( AT1G67720.1 )
(BLAST)
001: MGLCLAQLAV TCLFLVPFVL SQVTEFVSID CGCSSNYTDP RTGLGWVSDS EIIKQGKPVT LANTNWNSMQ YRRRRDFPTD NKKYCYRLST KERRRYIVRT
101: TFLYGGLGSE EAYPKFQLYL DATKWATVTI QEVSRVYVEE LIVRATSSYV DVCVCCAITG SPFMSTLELR PLNLSMYATD YEDNFFLKVA ARVNFGAPNM
201: DALRYPDDPY DRIWESDINK RPNYLVGVAP GTTRINTSKT INTLTREYPP MKVMQTAVVG TQGLISYRLN LEDFPANARA YAYFAEIEEL GANETRKFKL
301: VQPYFPDYSN AVVNIAENAN GSYTLYEPSY MNVTLDFVLT FSFGKTKDST QGPLLNAIEI SKYLPISVKT DRSDVSVLDA IRSMSPDSDW ASEGGDPCIP
401: VLWSWVNCSS TSPPRVTKIA LSRKNLRGEI PPGINYMEAL TELWLDDNEL TGTLPDMSKL VNLKIMHLEN NQLSGSLPPY LAHLPNLQEL SIENNSFKGK
501: IPSALLKGKV LFKYNNNPEL QNEAQRKHFW QILGISIAAV AILLLLVGGS LVLLCALRKT KRADKGDSTE TKKKGLVAYS AVRGGHLLDE GVAYFISLPV
601: LEEATDNFSK KVGRGSFGSV YYGRMKDGKE VAVKITADPS SHLNRQFVTE VALLSRIHHR NLVPLIGYCE EADRRILVYE YMHNGSLGDH LHGSSDYKPL
701: DWLTRLQIAQ DAAKGLEYLH TGCNPSIIHR DVKSSNILLD INMRAKVSDF GLSRQTEEDL THVSSVAKGT VGYLDPEYYA SQQLTEKSDV YSFGVVLFEL
801: LSGKKPVSAE DFGPELNIVH WARSLIRKGD VCGIIDPCIA SNVKIESVWR VAEVANQCVE QRGHNRPRMQ EVIVAIQDAI RIERGNENGL KSSSSSSSKA
901: QSSRKTLLTS FLELESPDIS RNSLAPAAR
Arabidopsis Description
Probable LRR receptor-like serine/threonine-protein kinase At1g67720 [Source:UniProtKB/Swiss-Prot;Acc:C0LGI2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.