CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX91466	Canola	cytosol	67.1	97.75
CDY07242	Canola	plastid	93.06	97.05
CDX87851	Canola	cytosol	35.48	61.88
CDY21773	Canola	cytosol, nucleus, plasma membrane	46.27	61.86
CDX68373	Canola	cytosol, nucleus, plasma membrane	46.27	61.22
CDY39524	Canola	cytosol	34.96	60.71
CDY02705	Canola	cytosol	27.25	59.22
CDY72115	Canola	cytosol	35.22	59.05
CDX76454	Canola	cytosol	51.93	58.89
CDY19842	Canola	cytosol	48.59	57.45
VIT_09s0002g02710.t01	Wine grape	cytosol	33.42	55.32
CDY65586	Canola	cytosol	25.19	54.14
CDX88716	Canola	plastid	39.33	54.06
CDY42327	Canola	cytosol	44.99	52.87
KRH44235	Soybean	cytosol	26.48	47.91
GSMUA_Achr6P26480_001	Banana	cytosol	31.62	46.59
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, plastid	26.74	45.22
GSMUA_Achr4P15380_001	Banana	cytosol, nucleus, plasma membrane	16.2	42.57
CDY22854	Canola	mitochondrion	33.42	41.8
Os09t0358000-00	Rice	cytosol	14.4	40.58
TraesCS1B01G358500.1	Wheat	cytosol	32.39	39.62
GSMUA_Achr9P05980_001	Banana	plasma membrane	29.82	39.19
HORVU4Hr1G079270.1	Barley	cytosol	33.93	38.04
KRH44241	Soybean	plasma membrane, plastid	39.85	35.96
CDY55667	Canola	plastid	31.62	35.14
TraesCS1D01G033400.1	Wheat	cytosol	33.42	33.68
KRH44228	Soybean	plastid	38.82	33.04
GSMUA_Achr4P15390_001	Banana	plasma membrane	37.28	26.32
CDY33849	Canola	plasma membrane	50.9	22.45
TraesCS6D01G120500.1	Wheat	cytosol	6.43	21.74
TraesCS1D01G347300.1	Wheat	cytosol, plasma membrane, plastid	23.14	21.23
CDX68371	Canola	plasma membrane	48.07	21.2
TraesCS1B01G039600.1	Wheat	plastid	40.87	18.13
TraesCS1B01G358400.1	Wheat	plasma membrane	41.39	17.18
CDX74990	Canola	plasma membrane	36.25	15.38
CDX91333	Canola	plasma membrane	36.25	15.14
CDX79713	Canola	plasma membrane	35.99	15.01
CDY46751	Canola	plasma membrane	35.73	14.91
CDX85361	Canola	plasma membrane	34.19	14.79
CDX86282	Canola	plasma membrane	33.42	14.27
CDY01841	Canola	plasma membrane	37.02	14.13
CDX96066	Canola	plasma membrane	37.28	14.12

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:A0A078EIQ4	EnsemblPlants:CDY00634	ProteinID:CDY00634
ProteinID:CDY00634.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00110447001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF44
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EED52F	:

Description

BnaC04g22910D

Coordinates

chrLK031920:+:1077000..1079133

Molecular Weight (calculated)

44185.6 Da

IEP (calculated)

7.949

GRAVY (calculated)

-0.401

Length

389 amino acids

Sequence
(BLAST)

001: MSFSSCKQKF TLKWTIWYHI TYHSKSDKAL SSGLVRKQVD RRSAWIFSQY GFLVFIDLSN NSLSGPVPQA LLDRKNEGLA LKKQSRREAL RPSIETLKRR
101: FSYSEVMAMT NNFQKILGEG GYKQFKAEVE LLMRVHHINL VSLAGYCDER DHLALAYEYM ANRDLKEHLS GKEGSSFLDW QSRLRIAAET ALGLNYLHTG
201: CKPPMYHRDV KSTNVLLNED FQAKLGDFGL SRSFPIGSET HVSTVVVGTP GFLDPEYYQT HRLSEKSDVY SFGIVLLEII TNQLVIDQTR ENPHIAEWVR
301: FLLTSGDIES VMDPDLKGDY GSDSAWKVLE LAMSCSRLSS AERPNMAQVV HELNECLMYE KSRRGNSQDV SSKSSNEVNT STTIAPIPR

Best Arabidopsis Sequence Match ( AT1G51820.2 )
(BLAST)

001: MVPALRRLMD TKIQALRANE TREFNVTLNG EYTFGPFSPI PLKTASIVDL SPGQCDGGRC ILQVVKTLKS TLPPLLNAIE AFTVIDFPQM ETNENDVAGI
101: KNVQGTYGLS RISWQGDPCV PKQLLWDGLN CKNSDISTPP IITSLDLSSS GLTGIITQAI KNLTHLQILD LSDNNLTGEV PEFLADIKSL LVINLSGNNL
201: SGSVPPSLLQ KKGMKLNVEG NPHILCTTGS CVKKKEDGHK KKSVIVPVVA SIASIAVLIG ALVLFLILRK KRSPKVEGPP PSYMQASDGR LPRSSEPAIV
301: TKNRRFSYSQ VVIMTNNFQR ILGKGGFGMV YHGFVNGTEQ VAVKILSHSS SQGYKQFKAE VELLLRVHHK NLVGLVGYCD EGDNLALIYE YMANGDLKEH
401: MSGTRNRFIL NWGTRLKIVI ESAQGLEYLH NGCKPPMVHR DVKTTNILLN EHFEAKLADF GLSRSFLIEG ETHVSTVVAG TPGYLDPEYH RTNWLTEKSD
501: VYSFGILLLE IITNRHVIDQ SREKPHIGEW VGVMLTKGDI QSIMDPSLNE DYDSGSVWKA VELAMSCLNH SSARRPTMSQ VVIELNECLA SENARGGASR
601: DMESKSSIEV SLTFGTEVSP NAR

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g51820 [Source:UniProtKB/Swiss-Prot;Acc:C0LGG3]
SUBAcon: [plasma membrane,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.