Factsheet for VIT_09s0002g02710.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44235	Soybean	cytosol	48.94	53.49
CDY02705	Canola	cytosol	39.57	51.96
VIT_09s0002g02870.t01	Wine grape	cytosol	51.91	50.83
CDY65586	Canola	cytosol	38.72	50.28
GSMUA_Achr6P26480_001	Banana	cytosol	55.32	49.24
AT3G45920.1	Thale cress	cytosol	38.72	47.4
CDX91466	Canola	cytosol	53.19	46.82
AT3G46355.1	Thale cress	cytosol	56.6	45.7
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, plastid	44.68	45.65
CDX68373	Canola	cytosol, nucleus, plasma membrane	56.17	44.9
AT3G46410.1	Thale cress	cytosol	54.47	43.99
CDY21773	Canola	cytosol, nucleus, plasma membrane	54.04	43.64
CDY39524	Canola	cytosol	41.28	43.3
GSMUA_Achr4P15380_001	Banana	cytosol, nucleus, plasma membrane	27.23	43.24
CDX87851	Canola	cytosol	40.43	42.6
CDX76454	Canola	cytosol	62.13	42.57
Bra030691.1-P	Field mustard	cytosol	55.74	42.53
CDY19842	Canola	cytosol	57.87	41.34
CDX88716	Canola	plastid	49.36	40.99
Bra019480.1-P	Field mustard	cytosol	54.04	40.97
GSMUA_Achr9P05980_001	Banana	plasma membrane	48.94	38.85
Os09t0358000-00	Rice	cytosol	22.55	38.41
Bra018919.1-P	Field mustard	plasma membrane	41.7	37.69
VIT_09s0002g02900.t01	Wine grape	cytosol	46.81	37.41
CDY72115	Canola	cytosol	36.6	37.07
CDY42327	Canola	cytosol	49.36	35.05
VIT_00s0211g00040.t01	Wine grape	cytosol	28.94	34.17
Bra002545.1-P	Field mustard	plastid	44.68	34.09
CDY07242	Canola	plastid	53.19	33.51
CDY00634	Canola	plastid	55.32	33.42
TraesCS1B01G358500.1	Wheat	cytosol	45.11	33.33
CDY22854	Canola	mitochondrion	41.28	31.19
HORVU4Hr1G079270.1	Barley	cytosol	43.83	29.68
KRH44241	Soybean	plasma membrane, plastid	53.62	29.23
TraesCS1D01G033400.1	Wheat	cytosol	45.11	27.46
AT1G51620.2	Thale cress	cytosol	39.15	27.38
VIT_09s0002g02890.t01	Wine grape	cytoskeleton, cytosol, plastid	51.91	27.17
KRH44228	Soybean	plastid	51.91	26.7
CDY55667	Canola	plastid	37.87	25.43
GSMUA_Achr4P15390_001	Banana	plasma membrane	48.09	20.51
TraesCS6D01G120500.1	Wheat	cytosol	8.94	18.26
Bra030415.1-P	Field mustard	plasma membrane	51.49	17.66
TraesCS1D01G347300.1	Wheat	cytosol, plasma membrane, plastid	29.36	16.27
AT1G51910.1	Thale cress	plasma membrane	58.72	15.75
AT2G28960.2	Thale cress	plasma membrane	58.72	15.68
CDY33849	Canola	plasma membrane	56.6	15.08
CDX68371	Canola	plasma membrane	52.77	14.06
TraesCS1B01G039600.1	Wheat	plastid	45.11	12.09
VIT_08s0040g03140.t01	Wine grape	plasma membrane	46.38	11.8
TraesCS1B01G358400.1	Wheat	plasma membrane	46.81	11.74
VIT_09s0002g02840.t01	Wine grape	cytoskeleton, cytosol, nucleus	53.62	10.77
VIT_01s0010g02210.t01	Wine grape	plasma membrane	41.7	10.58
VIT_07s0005g06500.t01	Wine grape	plasma membrane	38.72	10.06
VIT_00s0211g00030.t01	Wine grape	plasma membrane	6.38	2.09

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	ProteinID:CCB59370	ProteinID:CCB59370.1	UniProt:F6HY47	EMBL:FN596494
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF44	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000210A767	ArrayExpress:VIT_09s0002g02710	EnsemblPlantsGene:VIT_09s0002g02710	EnsemblPlants:VIT_09s0002g02710.t01

Description

No Description!

Coordinates

chr9:-:2460725..2462005

Molecular Weight (calculated)

26283.4 Da

IEP (calculated)

4.640

GRAVY (calculated)

-0.222

Length

235 amino acids

Sequence
(BLAST)

001: MGLIYEYMVN GDLKRHLSDN YFMMPSVLSW EERLRIATDA AQGLDYLHDG CKPSIIHRDI KSTNILLNER FQAKLADFGL SRAFPIEGSS HVSTAVVGTP
101: GYLDPELTEK SDVFSFGVVL LEIITSQPAI SKDREKTHII EWVSCMLANG DIKNTVDPRL QGEFDINSAW KAVEVAMCCV SPTSTERPAM HYVVMELKQC
201: LEMEASQKEG HEPESKDSIG ITTEDQSTEI IPLAR

Best Arabidopsis Sequence Match ( AT1G51800.1 )
(BLAST)

001: MAFSSCFLLV LLQIFSALLL CLAQDQSGFI SLDCGSPRET SFREKTTNIT YISDANFINT GVGGSIKQGY RTQFQQQTWN LRSFPQGIRN CYTLNLTIGD
101: EYLIRANFLH GGYDDKPSTQ FELYLGPNLW STVTTTNETE ASIFEMIHIL TTDRLQICLV KTGNATPFIS ALELRKLMNT TYLTRQGSLQ TFIRADVGAT
201: VNQGYRYGID VFDRVWTPYN FGNWSQISTN QSVNINNDYQ PPEIAMVTAS VPTDPDAAMN ISLVGVERTV QFYVFMHFAE IQELKSNDTR EFNIMYNNKH
301: IYGPFRPLNF TTSSVFTPTE VVADANGQYI FSLQRTGNST LPPLLNAMEI YSVNLLPQQE TDRKEVDAMM NIKSAYGVNK IDWEGDPCVP LDYKWSGVNC
401: TYVDNETPKI ISLDLSTSGL TGEILEFISD LTSLEVLDLS NNSLTGSVPE FLANMETLKL INLSGNELNG SIPATLLDKE RRGSITLSIE GNTGLCSSTS
501: CATTKKKKKN TVIAPVAASL VSVFLIGAGI VTFLILKRKK RTKLGLNPNS GTGTTPLHSR SHHGFEPPVI AKNRKLTYID VVKITNNFER VLGRGGFGVV
601: YYGVLNNEPV AVKMLTESTA LGYKQFKAEV ELLLRVHHKD LTCLVGYCEE GDKMSLIYEF MANGDLKEHL SGKRGPSILT WEGRLRIAAE SAQGLEYLHN
701: GCKPQIVHRD IKTTNILLNE KFQAKLADFG LSRSFPLGTE THVSTIVAGT PGYLDPEYYR TNWLTEKSDV FSFGVVLLEL VTNQPVIDMK REKSHIAEWV
801: GLMLSRGDIN SIVDPKLQGD FDPNTIWKVV ETAMTCLNPS SSRRPTMTQV VMDLKECLNM EMARNMGSRM TDSTNDSSIE LSMNFTTELN PGAR

Arabidopsis Description

IOS1LRR receptor-like serine/threonine-protein kinase IOS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8I6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.