Factsheet for AT2G28960.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 8
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G46355.1	Thale cress	cytosol	22.16	67.01
AT3G46410.1	Thale cress	cytosol	22.05	66.67
AT3G45920.1	Thale cress	cytosol	12.95	59.38
VIT_09s0002g02710.t01	Wine grape	cytosol	15.68	58.72
KRH44235	Soybean	cytosol	13.18	53.95
AT1G51910.1	Thale cress	plasma membrane	48.41	48.63
GSMUA_Achr6P26480_001	Banana	cytosol	14.32	47.73
AT1G51620.2	Thale cress	cytosol	18.07	47.32
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, plastid	12.27	46.96
TraesCS1B01G358500.1	Wheat	cytosol	16.36	45.28
HORVU4Hr1G079270.1	Barley	cytosol	17.5	44.38
KRH44241	Soybean	plasma membrane, plastid	21.59	44.08
GSMUA_Achr4P15380_001	Banana	cytosol, nucleus, plasma membrane	7.27	43.24
GSMUA_Achr9P05980_001	Banana	plasma membrane	14.2	42.23
Os09t0358000-00	Rice	cytosol	6.48	41.3
KRH44228	Soybean	plastid	20.8	40.04
TraesCS1D01G033400.1	Wheat	cytosol	17.27	39.38
GSMUA_Achr4P15390_001	Banana	plasma membrane	24.09	38.48
TraesCS1D01G347300.1	Wheat	cytosol, plasma membrane, plastid	17.73	36.79
TraesCS1B01G039600.1	Wheat	plastid	36.48	36.6
TraesCS1B01G358400.1	Wheat	plasma membrane	38.3	35.97
AT2G37050.3	Thale cress	plasma membrane	32.05	30.19
AT1G67720.1	Thale cress	plasma membrane	30.23	28.63
AT5G48740.1	Thale cress	plasma membrane	28.86	28.38
TraesCS6D01G120500.1	Wheat	cytosol	2.73	20.87

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	EntrezGene:817445	UniProt:A0A178W0E8
ProteinID:AAC33224.1	ProteinID:ANM62343.1	ArrayExpress:AT2G28960	EnsemblPlantsGene:AT2G28960	RefSeq:AT2G28960	TAIR:AT2G28960
RefSeq:AT2G28960-TAIR-G	EnsemblPlants:AT2G28960.2	UniProt:C0LGL4	EMBL:FJ708704	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Malectin-like_Carb-bd_dom	RefSeq:NP_180462.2	ProteinID:OAP10803.1	PFAM:PF00069	PFAM:PF12819	PFAM:PF13855
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF44	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI000034EDBE	SEG:seg	:	:	:

Description

Probable LRR receptor-like serine/threonine-protein kinase At2g28960 [Source:UniProtKB/Swiss-Prot;Acc:C0LGL4]

Coordinates

chr2:-:12437718..12442592

Molecular Weight (calculated)

98970.3 Da

IEP (calculated)

6.302

GRAVY (calculated)

-0.278

Length

880 amino acids

Sequence
(BLAST)

001: MEGRRQRLLV FIFGALAITH LVQAQPPDQR GFISLDCGLP VNESPYTDPR TGLTFSSDAD FILSGLRGEA GDDNTYIYRQ YKDLRYFPDG IRNCYNLKVE
101: QGINYLIRAG FGYGNYDGLN VYPKFDLHVG PNMWIAVDLE FGKDREIIYM TTSNLLQICL VKTGSTIPMI STLELRPLRN DSYLTQFGPL DLIYRRAYSS
201: NSTGFIRYPD DIFDRKWDRY NEFETDVNTT LNVRSSSPFQ VPEAVSRMGI TPENASLPLR FYVSLDDDSD KVNVYFHFAE IQALRGNETR EFDIELEEDI
301: IQSAYSPTML QSDTKYNLSP HKCSSGLCYL KLVRTPRSTL PPLISAIEAF KVVDFPYAET NPNDVAAMKD IEAFYGLKMI SWQGDPCVPE LLKWEDLKCS
401: YTNKSTPPRI ISLDLSSRGL KGVIAPAFQN LTELRKLDLS NNSFTGGVPE FLASMKSLSI INLNWNDLTG PLPKLLLDRE KNGLKLTIQG NPKLCNDASC
501: KNNNNQTYIV PVVASVASVL IIIAVLILIL VFKKRRPTQV DSLPTVQHGL PNRPSIFTQT KRFTYSEVEA LTDNFERVLG EGGFGVVYHG ILNGTQPIAV
601: KLLSQSSVQG YKEFKAEVEL LLRVHHVNLV SLVGYCDEES NLALLYEYAP NGDLKQHLSG ERGGSPLKWS SRLKIVVETA QGLEYLHTGC KPPMVHRDVK
701: TTNILLDEHF QAKLADFGLS RSFPVGGETH VSTAVAGTPG YLDPEYYRTN RLNEKSDVYS FGIVLLEIIT SRPVIQQTRE KPHIAAWVGY MLTKGDIENV
801: VDPRLNRDYE PTSVWKALEI AMSCVNPSSE KRPTMSQVTN ELKQCLTLEN SKRGVREDMG SRSSVEMSTS FTTEINPKAR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.