Factsheet for VIT_09s0002g02900.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g02710.t01	Wine grape	cytosol	37.41	46.81
VIT_09s0002g02870.t01	Wine grape	cytosol	36.73	45.0
GSMUA_Achr6P26480_001	Banana	cytosol	33.33	37.12
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, plastid	28.91	36.96
TraesCS1B01G358500.1	Wheat	cytosol	37.76	34.91
GSMUA_Achr9P05980_001	Banana	plasma membrane	32.65	32.43
HORVU4Hr1G079270.1	Barley	cytosol	37.07	31.41
VIT_09s0002g02890.t01	Wine grape	cytoskeleton, cytosol, plastid	47.96	31.4
GSMUA_Achr4P15380_001	Banana	cytosol, nucleus, plasma membrane	15.31	30.41
Os09t0358000-00	Rice	cytosol	13.61	28.99
TraesCS1D01G033400.1	Wheat	cytosol	37.41	28.5
VIT_00s0211g00040.t01	Wine grape	cytosol	16.67	24.62
GSMUA_Achr4P15390_001	Banana	plasma membrane	39.46	21.05
TraesCS1D01G347300.1	Wheat	cytosol, plasma membrane, plastid	23.81	16.51
VIT_09s0002g02840.t01	Wine grape	cytoskeleton, cytosol, nucleus	50.34	12.65
TraesCS1B01G358400.1	Wheat	plasma membrane	40.14	12.59
TraesCS1B01G039600.1	Wheat	plastid	36.73	12.31
VIT_08s0040g03140.t01	Wine grape	plasma membrane	38.1	12.12
VIT_07s0005g06500.t01	Wine grape	plasma membrane	36.73	11.93
VIT_01s0010g02210.t01	Wine grape	plasma membrane	37.07	11.77
TraesCS6D01G120500.1	Wheat	cytosol	4.42	11.3
VIT_00s0211g00030.t01	Wine grape	plasma membrane	12.59	5.15

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	ProteinID:CCB59384	ProteinID:CCB59384.1	UniProt:F6HY61
EMBL:FN596494	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714
PIRSF:PIRSF000654	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF105	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI000210A773	ArrayExpress:VIT_09s0002g02900	EnsemblPlantsGene:VIT_09s0002g02900	EnsemblPlants:VIT_09s0002g02900.t01
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr9:+:2652219..2653725

Molecular Weight (calculated)

32871.0 Da

IEP (calculated)

8.269

GRAVY (calculated)

-0.060

Length

294 amino acids

Sequence
(BLAST)

001: MKLDMEHLCP VYLGHFRNRI ELAVKKLSAL NRGFRKFQTE ASFSIAELLT RVHHKNLVSP LGYHFESSSM TLIYEYMGPG SLRKYLSGIH FSNTQYNLWK
101: QRIGIALDVA QGLEYLHNGC KTPIIQRDIK SANILLNEKN EKLQAKVADF GLSRSVPNED PAYLSTVVVG TCHYLDPKYF LTAGLSEEND VYGFGIVLLE
201: LISGQPAVAK SSVGTVHLLQ CVPLLLLDTG EITAIVDPRL NIERFDIYSA RKLVGTAMAC VKCNSPKRPI MSDVADKLKQ CMNYLARTIG DAEE

Best Arabidopsis Sequence Match ( AT1G51850.1 )
(BLAST)

001: MERHCVLVAT FLLMLHIVHA QDQIGFISVD CGLAPRESPY NEAKTGLTYT SDDGLVNVGK PGRIAKEFEP LADKPTLTLR YFPEGVRNCY NLNVTSDTNY
101: LIKATFVYGN YDGLNVGPNF DLYFGPNLWT TVCLIKTGIS IPFINVLELR PMKKNMYVTQ GESLNYLFRV YISNSSTRIR FPDDVYDRKW YPYFDNSWTQ
201: VTTTLDVNTS LTYELPQSVM AKAATPIKAN DTLNITWTVE PPTTKFYSYM HFAELQTLRA NDAREFNVTM NGIYTYGPYS PKPLKTETIY DKIPEQCDGG
301: ACLLQVVKTL KSTLPPLLNA IEAFTVIDFP QMETNGDDVD AIKNVQDTYG ISRISWQGDP CVPKLFLWDG LNCNNSDNST SPIITSLDLS SSGLTGSITQ
401: AIQNLTNLQE LDLSDNNLTG EIPDFLGDIK SLLVINLSGN NLSGSVPPSL LQKKGMKLNV EGNPHLLCTA DSCVKKGEDG HKKKSVIVPV VASIASIAVL
501: IGALVLFFIL RKKKSPKVEG PPPSYMQASD GRSPRSSEPA IVTKNRRFTY SQVAIMTNNF QRILGKGGFG MVYHGFVNGT EQVAVKILSH SSSQGYKEFK
601: AEVELLLRVH HKNLVGLVGY CDEGENMALI YEYMANGDLK EHMSGTRNRF TLNWGTRLKI VVESAQGLEY LHNGCKPPMV HRDVKTTNIL LNEHFQAKLA
701: DFGLSRSFPI EGETHVSTVV AGTPGYLDPE YYKTNWLTEK SDVYSFGIVL LELITNRPVI DKSREKPHIA EWVGVMLTKG DINSIMDPNL NEDYDSGSVW
801: KAVELAMSCL NPSSARRPTM SQVVIELNEC IASENSRGGA SRDMDSKSSI EVSLTFDTEL SPTAR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:TAIR;Acc:AT1G51850]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.