CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88716	Canola	plastid	63.44	74.2
CDY65586	Canola	cytosol	39.58	72.38
CDY21773	Canola	cytosol, nucleus, plasma membrane	56.19	63.92
CDY72115	Canola	cytosol	44.71	63.79
CDX68373	Canola	cytosol, nucleus, plasma membrane	54.98	61.9
CDX87851	Canola	cytosol	41.69	61.88
CDY39524	Canola	cytosol	41.69	61.61
CDX91466	Canola	cytosol	49.55	61.42
CDY02705	Canola	cytosol	32.63	60.34
CDX76454	Canola	cytosol	58.31	56.27
CDY19842	Canola	cytosol	53.17	53.5
VIT_09s0002g02710.t01	Wine grape	cytosol	35.05	49.36
Bra002545.1-P	Field mustard	plastid	45.62	49.03
KRH44235	Soybean	cytosol	31.72	48.84
CDY07242	Canola	plastid	51.36	45.58
CDY22854	Canola	mitochondrion	42.3	45.02
CDY00634	Canola	plastid	52.87	44.99
GSMUA_Achr6P26480_001	Banana	cytosol	33.84	42.42
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, plastid	29.31	42.17
GSMUA_Achr4P15380_001	Banana	cytosol, nucleus, plasma membrane	18.73	41.89
TraesCS1B01G358500.1	Wheat	cytosol	40.18	41.82
HORVU4Hr1G079270.1	Barley	cytosol	43.2	41.21
Os09t0358000-00	Rice	cytosol	16.62	39.86
CDY55667	Canola	plastid	40.48	38.29
KRH44241	Soybean	plasma membrane, plastid	47.73	36.66
GSMUA_Achr9P05980_001	Banana	plasma membrane	32.02	35.81
KRH44228	Soybean	plastid	46.53	33.7
TraesCS1D01G033400.1	Wheat	cytosol	38.97	33.42
GSMUA_Achr4P15390_001	Banana	plasma membrane	43.81	26.32
CDX68371	Canola	plasma membrane	58.61	22.0
TraesCS6D01G120500.1	Wheat	cytosol	7.55	21.74
TraesCS1D01G347300.1	Wheat	cytosol, plasma membrane, plastid	27.49	21.46
CDY33849	Canola	plasma membrane	54.98	20.63
TraesCS1B01G039600.1	Wheat	plastid	41.39	15.62
CDX74990	Canola	plasma membrane	42.3	15.27
TraesCS1B01G358400.1	Wheat	plasma membrane	43.2	15.26
CDX91333	Canola	plasma membrane	42.3	15.04
CDY46751	Canola	plasma membrane	41.69	14.81
CDX79713	Canola	plasma membrane	41.69	14.79
CDX85361	Canola	plasma membrane	37.46	13.79
CDX86282	Canola	plasma membrane	36.86	13.39
CDY01841	Canola	plasma membrane	39.27	12.76
CDX96066	Canola	plasma membrane	39.27	12.66

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:A0A078HWY3	UniProt:A0A078HWY3	EnsemblPlants:CDY42327
ProteinID:CDY42327	ProteinID:CDY42327.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00074571001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF44	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE8F3C	:	:	:

Description

BnaC02g17040DBnaC02g17040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HWY3]

Coordinates

chrLK032521:-:4608..6200

Molecular Weight (calculated)

36715.0 Da

IEP (calculated)

7.527

GRAVY (calculated)

-0.232

Length

331 amino acids

Sequence
(BLAST)

001: MLIIDLPLPP GTSMVNDTFA NKKSRRFTYS EVVKMTNNFQ RVIGKGGSGM VYQGTVNGSE VAIKLLSQTS TQGYEQFKAE VDLLLRVHHT NLVSLVGYCY
101: EGDHLALIYE FLPNGDLKQH LSGKGGRSII NWSVRLRIAL ETALGLEYLH VGCTPPMVHR DVKTANILLD DNFKAKLADF GLSRSFQTIA GTPGYLDPEY
201: NHSGRLGEKS DVYSFGIVLL EMITNQPVIS QTSENSHITK WVSSKLNCGD IIEIMDPNLR KDYDSNSAWR AVELAMSCAN PSYSKRPSMS QVINELKECI
301: MCENSRLSNN QGLESRAINI GLDSSVVPKA R

Best Arabidopsis Sequence Match ( AT5G59660.1 )
(BLAST)

001: MVFLIFPWKV REDDYMKNSL GLLFLLVSII HIVRAQDQQG FISLDCGLPA NELSPYEESF TGLRFSSDEK FIRSGKNGRI RENPQGYAKP FVYGNYDGFD
101: LKPKFDLYLG PNLWATVDLQ TEVNDWGNYT ANIGFGIMGN GSYITKSGSL NLLSRTYLSK SGSDLRYMKD VYDRTWVSYG ASFRTGWTQI YTALEVNNSN
201: NYAPPKDALR NAATPTNASA PLTIEWPSGS PSQEVPGTNI TFFSDPIIPK KLDITSVQSV TPKTCQEGKC SLQLTRTNRS TLPPLLNALE IYAVIQFPQS
301: ETNEIDVIAI KKIEAMYESS RINWQGDPCV PQHFIWDGLN CSNTDISTPP RITSLNLSSS GLTGNIAAAI QNLTQLEKLD LSNNNLTGGV PEFLGNMKSL
401: SFIGNNLSGS IPQTLQKKRL ELFVEGNPRL CLSDSCRKPP KKKIHVAIVA SVASAAIVVA VLILFLILRK RKSTIVQGQH LPPSTSTVDV TFANKKSKRF
501: TYLEVIKMTN NFQRVLGKGG FGMVYHGTVK GSDQVAVKVL SQSSTQGYKQ FKAEALIYEF LPNGDLKQHL SGKGGKSIIN WSIRLQIALN AALGLEYLHI
601: GCIPPMVHRD VKTANILLDE NFKAKLADFG LSRSFQVRGE SYDSTFVAGT PGYLDPEYYP TSRLAAKSDV YSYGIVLLEM ITNQPVISEK YHITEWVGSK
701: LNRGDIIEIM DPNLGGVYDS NSAWRALELA MSCADPSSSK RPTMSQVINE LKECLVCENS RMSKTRGMEY QEMNISLDTS VVPGARYPMG QTSVCEWRQF
801: LNANQSSIAG EKVSPPGTAD DEEALFFSLD GIFRRRKPPE IIILSRRLAE AC

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:TAIR;Acc:AT5G59660]
SUBAcon: [vacuole,plasma membrane,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.