CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46751	Canola	plasma membrane	98.61	98.71
CDX74990	Canola	plasma membrane	84.78	86.26
CDX91333	Canola	plasma membrane	85.74	85.93
AT2G37050.3	Thale cress	plasma membrane	85.96	85.87
VIT_08s0040g03140.t01	Wine grape	plasma membrane	69.13	69.81
KRG95921	Soybean	plasma membrane, vacuole	69.45	69.6
KRH67635	Soybean	plasma membrane, vacuole	69.02	69.1
KRH32393	Soybean	plasma membrane	67.95	68.69
PGSC0003DMT400004363	Potato	plasma membrane	67.2	67.56
Solyc09g007280.2.1	Tomato	plasma membrane	66.77	67.13
KRH19805	Soybean	plasma membrane	68.27	67.05
GSMUA_Achr6P33110_001	Banana	plasma membrane	58.52	59.74
KXG28180	Sorghum	cytosol	4.18	59.09
Zm00001d041941_P001	Maize	plasma membrane	48.45	56.71
EES04305	Sorghum	plasma membrane	57.45	53.55
TraesCS3D01G543900.2	Wheat	plasma membrane	54.34	52.27
TraesCS3B01G603800.1	Wheat	plasma membrane	54.34	52.16
HORVU3Hr1G117680.4	Barley	plasma membrane	54.23	51.95
TraesCS3A01G538300.1	Wheat	plasma membrane, plastid	54.77	51.51
CDY39524	Canola	cytosol	12.0	50.0
CDX87851	Canola	cytosol	11.9	49.78
CDY72115	Canola	cytosol	11.79	47.41
CDY19842	Canola	cytosol	15.43	43.77
CDY01841	Canola	plasma membrane	47.59	43.57
CDY21773	Canola	cytosol, nucleus, plasma membrane	13.5	43.3
CDX68373	Canola	cytosol, nucleus, plasma membrane	13.61	43.2
CDX96066	Canola	plasma membrane	47.48	43.14
CDX91466	Canola	cytosol	12.22	42.7
CDX76454	Canola	cytosol	15.54	42.27
CDY02705	Canola	cytosol	8.04	41.9
CDX88716	Canola	plastid	12.65	41.7
CDY42327	Canola	cytosol	14.79	41.69
CDY65586	Canola	cytosol	7.4	38.12
CDY00634	Canola	plastid	15.01	35.99
CDY07242	Canola	plastid	14.36	35.92
CDY22854	Canola	mitochondrion	11.68	35.05
CDY55667	Canola	plastid	13.08	34.86
Os01t0976900-00	Rice	mitochondrion	24.65	34.85
CDY33849	Canola	plasma membrane	30.23	31.97
CDX85361	Canola	plasma membrane	30.65	31.81
CDX86282	Canola	plasma membrane	30.55	31.28
CDX68371	Canola	plasma membrane	25.83	27.32

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:A0A078CX48	EnsemblPlants:CDX79713
ProteinID:CDX79713	ProteinID:CDX79713.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00132523001
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Malectin-like_Carb-bd_dom	PFAM:PF07714	PFAM:PF12819	PFAM:PF13855	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF141	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0004EE4602	SEG:seg	:	:	:	:

Description

BnaC03g20490D

Coordinates

chrLK031818:+:1834099..1838961

Molecular Weight (calculated)

103464.0 Da

IEP (calculated)

5.736

GRAVY (calculated)

-0.223

Length

933 amino acids

Sequence
(BLAST)

001: MSELEMMRVS LLLSCLLAST CLFTSSSAQS AGFVSLDCGG TEPFTDELGL NWTPDDHHLF GATANISSLN ETKTQYTTLR HFPADSRKYC YTLNVTSRNR
101: YLVRATFLYG NFDSNNVYPK FDISLGATHW TTIVISEAAT VETAELVFLA SSPSVSVCLS NATTGQPFIS TLELRQLNGS MYLTEFEDKF HLSVSARINF
201: GAETEDPVRY PDDPYDRIWE SDLLKKANYL VDVAAGTMRV STTSPIDNGA VMDKPPQKVM QTAVVGTNGS LTYRMNLEGF PGNGRAFTYF AEIEDLAEDE
301: SRKFRLILPD HPEYSKSIVD VKENTQRAYK VYEPGYVNIT LPYVLNFRFA KTADSSRGPI LNAMEISKYL EKSDGSVDAS VMADLASLYS STVWGQEGGD
401: PCLPSPWSWV TCSSDPQPRV VTVKLSDMNL TGEIPSELTQ LTGLVELLLD GNSLTGSIPD FSRCLNLKII HLENNRLTGK IPSSLAKLPN LTELYLQNNM
501: LTGEIPSSLT KNVISNFSGN YNLKEGGDKG RKLGVIIGAS VGAIVLLIVT IISLMCMCKL KEDNKMRKTS AELTTRPTHV QRASSTLSEA HGDAAHCFTL
601: YEIEEATNKF EKRIGSGGFG IVYYGLTKDG KEIAVKVLGN NSYQGKREFA NEVTLLSRIH HRNLVQFLGY CQEEGRNMLV YEFMHNGTLK EHLYGVVPRD
701: RRISWIKRLE IAEDAARGIE YLHTGCVPAI IHRDLKTSNI LLDKHMRAKV SDFGLSKLAV DGTSHVSSIV RGTVGYLDPE YYISQQLTEK SDVYSFGVIL
801: LELISGQEAI SNENFGVNCR NIVQWAKMHI DNGDIRGIID PALAEDDYSL QSMWKIAEKA LLCVKPHGNM RPSMSEVQKD IQDAIRMEKE ALVGRGGMSD
901: EFSRSSAHSS SFNMGMRDNY VSIDESVLTP TAR

Best Arabidopsis Sequence Match ( AT2G37050.3 )
(BLAST)

001: MVRISLLLLC LLVSTCLFTS SSAQAPGFVS LDCGGAEPFT DELGLKWSPD NHLIYGETAN ISSVNETRTQ YTTLRHFPAD SRKYCYTLNV TSRNRYLIRA
101: TFLYGNFDNS NNVYPKFDIS LGATHWATIV ISETYIIETA ELVFLASSPT VSVCLSNATT GQPFISTLEL RQLSGSMYGS MLSEDRFYLS VAARINFGAE
201: SEASVRYPDD PYDRIWESDL QKKPNYLVDV AAGTVRVSTT LPIESRVDDR PPQKVMQTAV VGTNGSLTYR MNLDGFPGFG WAFTYFAEIE DLAEDESRKF
301: RLVLPEQPEY SKSVVNIKEN TQRPYRVYAP GYPNITLPFV LNFRFAKTAD SSRGPILNAM EISKYLRKSD GSVDATVMAN VASLYSSTEW AQEGGDPCSP
401: SPWSWVQCNS DPQPRVVAIK LSSMNLTGNI PSDLVKLTGL VELWLDGNSF TGPIPDFSRC PNLEIIHLEN NRLTGKIPSS LTKLPNLKEL YLQNNVLTGT
501: IPSDLAKDVI SNFSGNLNLE KSGDKGKKLG VIIGASVGAF VLLIATIISC IVMCKSKKNN KLGKTSAELT NRPLPIQRVS STLSEAHGDA AHCFTLYEIE
601: EATKKFEKRI GSGGFGIVYY GKTREGKEIA VKVLANNSYQ GKREFANEVT LLSRIHHRNL VQFLGYCQEE GKNMLVYEFM HNGTLKEHLY GVVPRDRRIS
701: WIKRLEIAED AARGIEYLHT GCVPAIIHRD LKTSNILLDK HMRAKVSDFG LSKFAVDGTS HVSSIVRGTV GYLDPEYYIS QQLTEKSDVY SFGVILLELM
801: SGQEAISNES FGVNCRNIVQ WAKMHIDNGD IRGIIDPALA EDDYSLQSMW KIAEKALLCV KPHGNMRPSM SEVQKDIQDA IRIEKEALAA RGGISDEFSR
901: SSAHSSSLNM GMLDLAGSQS YVSIDESVLQ PTAR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGM1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.