Factsheet for Zm00001d041941_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 5
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04305	Sorghum	plasma membrane	90.59	72.13
TraesCS3D01G543900.2	Wheat	plasma membrane	71.64	58.87
TraesCS3B01G603800.1	Wheat	plasma membrane	71.64	58.74
HORVU3Hr1G117680.4	Barley	plasma membrane	70.89	58.01
TraesCS3A01G538300.1	Wheat	plasma membrane, plastid	71.52	57.46
GSMUA_Achr6P33110_001	Banana	plasma membrane	58.34	50.88
VIT_08s0040g03140.t01	Wine grape	plasma membrane	58.09	50.11
Zm00001d052306_P004	Maize	plasma membrane	56.59	49.29
KRG95921	Soybean	plasma membrane, vacuole	56.84	48.66
PGSC0003DMT400004363	Potato	plasma membrane	56.59	48.6
Solyc09g007280.2.1	Tomato	plasma membrane	56.59	48.6
CDX79713	Canola	plasma membrane	56.71	48.45
KRH67635	Soybean	plasma membrane, vacuole	56.59	48.39
CDY46751	Canola	plasma membrane	56.34	48.18
Bra023094.1-P	Field mustard	plasma membrane	56.34	48.12
CDX74990	Canola	plasma membrane	55.21	47.98
KRH32393	Soybean	plasma membrane	55.33	47.78
AT2G37050.3	Thale cress	plasma membrane	55.96	47.75
CDX91333	Canola	plasma membrane	55.21	47.26
KRH19805	Soybean	plasma membrane	55.46	46.53
Bra005220.1-P	Field mustard	plasma membrane	55.33	46.52
Os01t0976900-00	Rice	mitochondrion	21.58	26.06
Zm00001d021829_P001	Maize	plasma membrane	18.07	24.87

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	UniProt:A0A1D6MZX8	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009506	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf
InterPro:Malectin-like_Carb-bd_dom	ProteinID:ONM34125.1	PFAM:PF07714	PFAM:PF12819	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF141	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000844E480	EnsemblPlantsGene:Zm00001d041941	EnsemblPlants:Zm00001d041941_P001	EnsemblPlants:Zm00001d041941_T001	SEG:seg	:

Description

Leucine-rich repeat protein kinase family protein

Coordinates

chr3:+:144670690..144674258

Molecular Weight (calculated)

86946.4 Da

IEP (calculated)

6.968

GRAVY (calculated)

-0.131

Length

797 amino acids

Sequence
(BLAST)

001: MASSSSLNPS SYSCFLFVTA AAVFFTASDA QVPGFVSIDC GGSTNYTDEL GLQWTGDAGW FPFGQTATIS VPSEKRAQYS TLRYFPSPSA SSSSSSKHCY
101: TLHVRTRTRY LVRATFLYGN FDSSNVFPEF DLYLGASHWS TIVIYDDSKV VTREAVVLAA DPALSVCLSS TGTGTPFIST LELRQLNGSL YYTDYEADAF
201: LALSARINFG APTADPVRYP DDPYDRIWES DMVRRANYLV DVAAGTVNVS TDRPVFVAGS ERPPQKVMQT AVVGSLGELT YRLDLPGFPG NGWAFSYLAE
301: IEEFLVPETR KFKLYIPGLA DVSKPTVDIG ENAPGKYRLY EPGFPNISLP FVLSLALRKT NDSSKGPILN ALEIYKYMHM ELGSPDGPVM ATLSLALASS
401: SSSLADVAME GGDPCLPSPW SWVKCNSEAQ PRVVSINLSG KNLTGSIPPQ VADLPCLAEI GFANNMLTGP IPDLSGSSNL SIIHLENNQL TGTVPSYFGS
501: LPKLSELYLE NNRLSGPIPK ALLSRSIIFN YSGNVYLGTA GKQKKKHVII IISALLGASL LLAAALCCYM LTRKAMNSSS SPQAQEKALP AEQNKLQKYP
601: STQQLQSIAT ETAHPYSLCE LEEATNKFAS RIGSGGFGIV YYGKLSDGKE IAVKVPSNDS YQGKKQFSNE VVLLSRIHHR NLVAFLGYCH EDGRNILVYE
701: FMHNGTLKEQ LHRRDKHISW IKRLEIAEDA AKGIEYLHTG CTPSIIHRDI KTSNILLDKH MRAKVSDFGL SKLLAAEGKD SHASTNVRGT MGYLDPQ

Best Arabidopsis Sequence Match ( AT2G37050.3 )
(BLAST)

001: MVRISLLLLC LLVSTCLFTS SSAQAPGFVS LDCGGAEPFT DELGLKWSPD NHLIYGETAN ISSVNETRTQ YTTLRHFPAD SRKYCYTLNV TSRNRYLIRA
101: TFLYGNFDNS NNVYPKFDIS LGATHWATIV ISETYIIETA ELVFLASSPT VSVCLSNATT GQPFISTLEL RQLSGSMYGS MLSEDRFYLS VAARINFGAE
201: SEASVRYPDD PYDRIWESDL QKKPNYLVDV AAGTVRVSTT LPIESRVDDR PPQKVMQTAV VGTNGSLTYR MNLDGFPGFG WAFTYFAEIE DLAEDESRKF
301: RLVLPEQPEY SKSVVNIKEN TQRPYRVYAP GYPNITLPFV LNFRFAKTAD SSRGPILNAM EISKYLRKSD GSVDATVMAN VASLYSSTEW AQEGGDPCSP
401: SPWSWVQCNS DPQPRVVAIK LSSMNLTGNI PSDLVKLTGL VELWLDGNSF TGPIPDFSRC PNLEIIHLEN NRLTGKIPSS LTKLPNLKEL YLQNNVLTGT
501: IPSDLAKDVI SNFSGNLNLE KSGDKGKKLG VIIGASVGAF VLLIATIISC IVMCKSKKNN KLGKTSAELT NRPLPIQRVS STLSEAHGDA AHCFTLYEIE
601: EATKKFEKRI GSGGFGIVYY GKTREGKEIA VKVLANNSYQ GKREFANEVT LLSRIHHRNL VQFLGYCQEE GKNMLVYEFM HNGTLKEHLY GVVPRDRRIS
701: WIKRLEIAED AARGIEYLHT GCVPAIIHRD LKTSNILLDK HMRAKVSDFG LSKFAVDGTS HVSSIVRGTV GYLDPEYYIS QQLTEKSDVY SFGVILLELM
801: SGQEAISNES FGVNCRNIVQ WAKMHIDNGD IRGIIDPALA EDDYSLQSMW KIAEKALLCV KPHGNMRPSM SEVQKDIQDA IRIEKEALAA RGGISDEFSR
901: SSAHSSSLNM GMLDLAGSQS YVSIDESVLQ PTAR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGM1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.