Factsheet for PGSC0003DMT400027550

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g077760.1.1	Tomato	cytosol	96.06	50.69
TraesCS7B01G138300.1	Wheat	mitochondrion	16.27	35.03
VIT_18s0001g09020.t01	Wine grape	cytosol	63.52	34.82
TraesCS7A01G252600.1	Wheat	cytosol	15.75	33.9
KRH05572	Soybean	cytosol	55.12	29.96
KRG88765	Soybean	cytosol	52.49	28.74
PGSC0003DMT400062773	Potato	cytosol	4.99	27.54
GSMUA_AchrUn_...	Banana	cytosol	42.52	23.62
Zm00001d031528_P001	Maize	cytosol	34.65	18.97
KXG25601	Sorghum	cytosol	34.38	18.82
HORVU7Hr1G052100.1	Barley	cytosol	34.12	18.54
TraesCS7D01G251400.1	Wheat	cytosol	33.86	18.4
PGSC0003DMT400075284	Potato	cytosol	29.13	16.54
PGSC0003DMT400074204	Potato	cytosol	28.35	16.46
PGSC0003DMT400075972	Potato	cytosol	27.3	15.52
Os08t0519900-00	Rice	cytosol	0.26	0.38

Protein Annotations

EnsemblPlants:PGSC0003DMT400027550	EnsemblPlantsGene:PGSC0003DMG400010621	Gene3D:1.20.1280.170	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987
InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	PANTHER:PTHR12542	PANTHER:PTHR12542:SF32	PFAM:PF03081	PGSC:PGSC0003DMG400010621
SUPFAM:SSF74788	UniParc:UPI000295D805	UniProt:M1APU0	MapMan:22.6.3.1	:	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400010621]

Coordinates

chr4:+:66911112..66912619

Molecular Weight (calculated)

44115.2 Da

IEP (calculated)

9.429

GRAVY (calculated)

-0.479

Length

381 amino acids

Sequence
(BLAST)

001: MDGVIWPECF VKIADKIMAV FFRFGEGVAR SKKEPQKLFK LLDMFESLEK LKPEFSEIFA GEAGADICSR FRELEKLLVH SSTKVFFELG LQIEANQDVL
101: PPQDGSVPKL VRYAINYLKY LLTDAYSATI IRVLRTEQIW KAGVLSTPET DENLLKDAMF NIVDAIRRNV ESKKLRYKDK VLPHVFVMNT YWYIYMRTRS
201: TELGKLIGDQ YMKKTYKIVA EESAYSYQKQ AWGPLVKMLD KEELKRVDKD GLTAMIRGKM EAFTKGFDDI TQRHKSFYHI PDADLREQMR EATMKLVVPA
301: YTEFLNNFAS SLHVKSYPSP EYIEDTLNQM FEVVDHHKSS GKSSLRPRQM RDTSDGSKSL SGEQSRRSKD FRRSKTSAID T

Best Arabidopsis Sequence Match ( AT4G31540.1 )
(BLAST)

001: MMAESTGVDR GIQSLIAARK SLKLSLEKSK AIGLALGKTG PRFDEIEQRL PLLEAAVRPI RADGEALKDV GGNINRAVGP AAAVLKVFDA VHGLEKSLLS
101: DPKNDLSSYL SVLKRLEEAL KFLGENCGLA IQWLEDIVEY LDDHHVADEK YLSNLKKSLR GLSEFHNDRG GGEEKERSQL RLDGGLRNAA LDKLENEFRR
201: LLKDNSVPLP MASPSSLGDQ ACIAPSQLPV TVIHKLQAIL GRLRANNRLD KCISIYVEVR SLNVRASLQA LDLDYLDISV SEFNDVQSIE GYIAQWGNHL
301: EFAVKHLFEA EFKLCNDVFE RLGLNVWMDC FSKIAAQAGM LAFLQFGKTV TDSKKDPIKL LKLLDIFTSL NKLRADFNRL FGGAACIEIQ NFTRDLIKRI
401: IDGAAEIFWE LLVQVEIQKQ TPPPSDGGVP RLVSFVTDYC NKLIGDKYKS TLTQVLLIHK SWRSERFQDN QLMVEVLRII KAIEQNLDVW MKAYPDQTLA
501: HFFGMNNHWH LYKNLKGTNI GDHLGDSWLK EHDQYKEYYA TVFLRDSWGK LPSHLSREGL ILFSGGHATA RDLVKKRLKA FNDAFDEMYK KQASWVLPEK
601: DLRDRVCQQI VQAIVPVYRS YMQNYGPLVE KDASSSKYVR YTVVALEKIL SSLYMPKPMR YGSFKGTPPS EKFKNDVDLR RTTSAVV

Arabidopsis Description

ATEXO70G1EXO70-G1 protein [Source:UniProtKB/TrEMBL;Acc:Q7XYW9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.